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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0257000 |
| Transcript ID | LotjaGi3g1v0257000.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Caffeic O-methyltransferase; TAIR: AT3G53140.1 O-methyltransferase family protein; Swiss-Prot: sp|Q8W013|COMT1_CATRO Caffeic acid 3-O-methyltransferase; TrEMBL-Plants: tr|A0A0L9UIF4|A0A0L9UIF4_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0257000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:44360870..44362883) extracted from Lotus japonicus Gifu genome v1.2.
ATGGAGAACAACGCCGAGGAGTCGCGGAAGCAAGCGAGGCTCGCCATTATGGAGCTGGCGAACATGATAAGCGTTCCCAT GTCCCTCAACGCCGTCGTTCGCCTCAACGTCGCTGACGCCATCTGGCAAGGCGGTTCCAACGCTCCTCTCTCCGCCGCAC AGATCCTTGAGCGCGTTCTTCCTGGCGGCGACGCTGAGAACCTCCAGCGCGTCCTCCGTATGCTGGCTAGCTACGGCGTC TTCGAGGAGCACATCGGCGGCGGCAAAAGAACATACTCCCTGACGGACGTTGGCAAAACGCTCGTTTCCGATGAACAAGG CCTATCCTATGCGGCTTATGTTCTCCAACACCACCAGGTCAGTTCATAAATTTTTTGAATAAAAGAAAAGCATTAGCAGT ATCTAAAATCGTTTTCAAAAAAATATCTAAAATCACTTACTTGTATTATTATTATTGACTTTAAAAAAAAAATTACTATT ATTATTACAAAATGCTATTTTTAATAGTTAACACATGCCTGCTCTGAACAAAACCTTTGAAGATGATTCTGTACTCCAAT TCGGTAGAGGAACTTTAGAACACTTTTGCGGAAATGCACTTGATCGGTGCTGTATATTCAAAGTGGCTTACTCATGGGTG CCGGTGATGCTATGATAAAAATTTGTTATTTGAACTTTTAGGTCAAGAGTTTTGAATTTTTAAAGCAAATATTTGACATT CATCACTTTTGAGTCGAAATTGTGATAGTAATTTAACACACTATAGTATTTTTCAAGAGGCCTCACCCCTCCATGTAAAA AAAACCCTAGTATATTCAAAAATTTAGGATAAAACTAAATTTCAGTTCTAGCTAATGGTAAAAAACTTTTACAATTGATG AAGTTATATATTTAAATTTGGATATAATTTACACCGTTTTTGCACACATATAATCTCTATATTGTTGTATTTTATGGGGT AATTACATGTATGCCTTGTAGGATGCGTTGATGAGAGCATGGCCATTGGTACATGAGGCAGTTGTGGACCCTACGAGGGA GCCCTTTGAGAGGGCAAACGGAGAGGCAGCATACATGTACTATCTGAAGCAATCAGAGATGAACGAGTTAATGTTGAAGG CCATGTCAGGGGTCTCAGTGCCCTTTATGAGGGCAATGTTGGATGGATATGATGGCTTCCAAGGTGTGGAGAAGTTGGTG GACGTGGGTGGCAGCGGCGGTGACTGCCTCCGCATGATCTTGCAGAAACACCCCTCCATCAAGGAAGGAATCAACTTTGA CCTCCCTGAAGTTGTCGCCAAAGCACCACAAATTCCAAGTAAGTAAAATTAATTAATCAAAATTGCGTTTATTTTAGCTT TTTTTTAAATCATTTTTTAATTAAAAATATTTTCTTACAAAAATGACATATTTCTTTGTTTCAATTTTTTTATTAAAAAA TATTATTTTTTAAAAAGCTGAAATCATATTATAATGAAAATGTACTTTTATTAGCTTATTGGGAAAATCTATTATGTTAG ATGAGATAGAACATAAAAGAATAATTTAAAATAGTAAACACAAATCAACTTTTTTTTTTCAAAATCTCTAAAAATTAATT TTTTTAAATAGATATTAATCATTATTTTTTAATATGAAAGTAACACACCCTAAACCACCTTTCACATTATCGGCGTGTTG CTTTCGTGATTGGAAAATCTATAATCTGTTAATCACTTATAGAAATTAGAAAGTCAATTACAGAATAGAACTTATGAGAT TTATTTATCAGTACTTGGTAAGATTCGGTTGTGATTTCTGAACTATGATATGAAAATTGTAGGTGTAACCCATGTGGGTG GTGACATGTTCAAATATATTCCCCAAGCGGATGCTATCTTTATGAAGGTGCGTCTTCCCTTCCCGAAATATTCTCATAGC TCTGCCTGCATATCTATCTAATTTTATTTTTTGGCTGATAGTAAAACTTTGGCCATTCTTAATTTGCAAAAATACAAAAT TGTTGTCTTTCTGA
CDS sequence (LotjaGi3g1v0257000.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGAACAACGCCGAGGAGTCGCGGAAGCAAGCGAGGCTCGCCATTATGGAGCTGGCGAACATGATAAGCGTTCCCAT GTCCCTCAACGCCGTCGTTCGCCTCAACGTCGCTGACGCCATCTGGCAAGGCGGTTCCAACGCTCCTCTCTCCGCCGCAC AGATCCTTGAGCGCGTTCTTCCTGGCGGCGACGCTGAGAACCTCCAGCGCGTCCTCCGTATGCTGGCTAGCTACGGCGTC TTCGAGGAGCACATCGGCGGCGGCAAAAGAACATACTCCCTGACGGACGTTGGCAAAACGCTCGTTTCCGATGAACAAGG CCTATCCTATGCGGCTTATGTTCTCCAACACCACCAGGATGCGTTGATGAGAGCATGGCCATTGGTACATGAGGCAGTTG TGGACCCTACGAGGGAGCCCTTTGAGAGGGCAAACGGAGAGGCAGCATACATGTACTATCTGAAGCAATCAGAGATGAAC GAGTTAATGTTGAAGGCCATGTCAGGGGTCTCAGTGCCCTTTATGAGGGCAATGTTGGATGGATATGATGGCTTCCAAGG TGTGGAGAAGTTGGTGGACGTGGGTGGCAGCGGCGGTGACTGCCTCCGCATGATCTTGCAGAAACACCCCTCCATCAAGG AAGGAATCAACTTTGACCTCCCTGAAGTTGTCGCCAAAGCACCACAAATTCCAAGTGTAACCCATGTGGGTGGTGACATG TTCAAATATATTCCCCAAGCGGATGCTATCTTTATGAAGGTGCGTCTTCCCTTCCCGAAATATTCTCATAGCTCTGCCTG CATATCTATCTAA
Protein sequence (LotjaGi3g1v0257000.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MENNAEESRKQARLAIMELANMISVPMSLNAVVRLNVADAIWQGGSNAPLSAAQILERVLPGGDAENLQRVLRMLASYGV FEEHIGGGKRTYSLTDVGKTLVSDEQGLSYAAYVLQHHQDALMRAWPLVHEAVVDPTREPFERANGEAAYMYYLKQSEMN ELMLKAMSGVSVPFMRAMLDGYDGFQGVEKLVDVGGSGGDCLRMILQKHPSIKEGINFDLPEVVAKAPQIPSVTHVGGDM FKYIPQADAIFMKVRLPFPKYSHSSACISI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 254 | 254 | 1.6E-128 | – | |
| PANTHER | 1 | 254 | 254 | 1.6E-128 | – | |
| Gene3D | 1 | 101 | 101 | 4.6E-23 | ||
| SUPERFAMILY | 8 | 105 | 98 | 1.48E-20 | ||
| ProSiteProfiles | 17 | 270 | 254 | 40.594 | ||
| Gene3D | 102 | 257 | 156 | 2.7E-35 | – | |
| SUPERFAMILY | 108 | 253 | 146 | 1.02E-27 | ||
| Pfam | 130 | 253 | 124 | 8.9E-26 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | O-methyltransferase activity | Catalysis of the transfer of a methyl group to the oxygen atom of an acceptor molecule. |
Expression pattern of LotjaGi3g1v0257000.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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