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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0266300 |
| Transcript ID | LotjaGi3g1v0266300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Choline transporter-related family protein; TAIR: AT3G15380.1 Plasma-membrane choline transporter family protein; Swiss-Prot: sp|Q8BY89|CTL2_MOUSE Choline transporter-like protein 2; TrEMBL-Plants: tr|I1LUZ7|I1LUZ7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0266300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:50307750..50319959) extracted from Lotus japonicus Gifu genome v1.2.
CTAAAAGAAAAAGCTATTCCTCACTACAGAACCTTTCACATTCTCCTTCCGAGTCCCACCTTCTACTTCACTCCTACACC ATCTTTTCTGATGTCTGCATCTTTTCTGCAACTTGAGTCTCTGAAATGTTGAACTGAGCTAAGGTTGTAACTTTGTCAAT GAGGGGTCCTTTGGGTGCAGTTGTTGGGAGGTATCCATCAAGTGATGGAACTACCCATTTGGGTGGAATCATAAGGCACA GCAGGAAATGTAGAGACATACTTGTTCTTGTCATCTTTATAGCGTTCTGGATTTCCATGATTGTCAACTCCAGCTTTGCT TTTAACAAAGGAAACCCATTAATGTGAGAGTTTCAAAGTTTCCAACTTTATCTGATTATGCATTTTGTTCATGAGTTTTC TGTGATGCGCAAGTTGTTGTTTTTAAGGCTGAACACAAGGCCTGTGATGCTATTTCGCATTGGGCTTCTTTCATTGTGCT TTTTTCAAAAGGAAATTTTGCCTTGGTTGTTTAGCTTTGAAGAATTTATGCTTTTCATTTTTTCCTTTTTTGTTTTGTTG GTCTTTAATTAGTATGATTATTCAATAAATCTATGACAAAGCTTAGCAAATGGGTGTTTTTATGCTTCAAATAACACGAA ATTCTCATTAAAAGAAAAGATTTGAATCATATCATTGGATTTATCCATCCTATAGACACATTACACATACCAATGTTCAT TGGATCTTTTGCTAGTGTACACTAATCTGGTTGCTGTGGAACTGGAACTCTGAAAGTAAGAAGTGGAAATTGATTGTATA GTAACTTTAAGCCCTTAATTTTATTCTCACTTTTGTTGTTATGGTTGTGTAATGTGTGATAACTGATACTATACTATGAA TTACTAGGCTTACTTTTGGGCTAGATTACAAAGGAAATGTGTGTGGGGACAAGCACGAAGGCCTTCACGAACTGGAGCTC AAATACTGGCTAAACCCTTATCAGGTTTATCAAAGTGGTTTGAAGGATAGTGAGTTCAAACTAGCCAATGCCCGCAGTAT ATGCTTGTTGGACTGCCCTAATCCTCCTGATGATTCACTAAGTTGGGTGTGTGATTATCCGGAAGGAGATATTCGTGTTT CAATGAATGACTGGATTGATATGAACTATGATTATTATGAGTTCCTTACGCCAGAAATGAAAAACTCCTCTCTTCAACTT CAGGGCCCTTGTTATCCTGTCATATTTCCTAGTATAAATGGTAAGAGAACTTTTCCATTCTAATGCATTTGTAAAAGCCA GATTTTGCTGTATGTTTGCCAATAGTTGTCATGTGTGCTGTGGAATGCATTTTTTACACTTGTTGCAACTTGTGCACCTT CTAAGGCATTCTTTTTATGCTCTCTCTCTCTCGTGGTTTTTTTAAGGCAGGCAGGGAGTGAGGGAGAAGAGTGGTTGTTG GGGAACTGTCAGTTTCCTATATATATTATGTTTTTAAAGTACCTAATTTCTAAATAATACTTTTTGTCTAGTTTACTGGA GTTGTCAGTTCATTGCTCGAGCATCAAATTCGTCTTTAACACATTGGCAGAAGCTGGGTGGAGTCAACATAAATGAAGAC ATTGTCATTGATAAGTCCATTCACAAGCATATCAATTCTTGGTCAGCTGTCTTAAAGGTTAACGTTTTCAAGTTTCGACT TTTATTTTTTATTGATGTTATTACTGATATTATCTGGGAAAGGGCCTTAACCCCAGCATTCTACATTTTGTATTGTTTCA TCGGCGTGTTAGTTTTAACTAGTAATACTAGAAATAAGCTATTAAAGGAAATTTGTGGGGCAAACAAGTACCTTAAATAT GCGTACTTATTAAAGTTTTCATCTCCTTGAGTTTATCAAACCTTTTATAAACCCCTAAAAATGTTCCAAGGAAGAATGGT ACTTCGAGGGCTAGCTACTTATAGAGTTTAACATTCAATTGGTTGATATCTTAGAGTGTTTGTTGAAAATCCAATAAATG TGAGGTAATGAGTAAAAGTTAATAGATTATAGATGCTTGTCGATATGCATTATGTTTTGAATCTTGATGCCTACCTATTT TCACATAGCTTTGCTATACCCTTCATAACATTTTCACTCTTACTAGTGCACTTGTTTGAAACATTGCTTTGCACTGTTTC AATTATCCTGCCTTTAAGCATTGTGTATTTCCTGCTACAGAAACTTCAAGTTTCAAAATTATTTTCATTTGCAGAGATAC ATGGCAGACATAGGAAAGGCATGGCCTGTGCTGATTGTTTGCGGAGGGATTTTACCTCTGTTTCTGTCTGTTATTTGGCT GGTAATGATTCGGCATTTTGTTACTGCAATGCCTTGGATAACGGTGGTTTTATTTAATGTTCTAATAGTATCGGTTACAA TGTTCTACTACCTAAAAGGTTAGGATCTCTGCTGGGCTATTATGACTTCACAGAAGATTACCTCAATAATAATATTCCTT TTCTGTTATATTCATATTTCCTTTCTTTACCCTGTGTATATAAGATTTACTTACTTGTCAGCTGCATGGCCTATTGATTT TTGAGATTTCAGTTTTTATAATACCCTTGCATCAACTTCCCTTGACATCCTATCTGATAATCCAATCAAGCACATAAACA CTATGACATACCTATTATGTTAACAGTGATATCCTATCTGATTATACCCTTGCATCAACTGCACTTCAACATCCTAGTAT GTTAAATTTGACACATGTTACCAACCTATTATTAGACAGTTACGACAGACCTGTTTGTGTAACTAAGCGGACTAAAAGTT TAAAAGGAATTTCTAGGTCAGAAACAATCAAAAAGTATTGGAGACATGTTTTCAGCAAAAAATATGACTTATGGCTGAGG CAGGGGCCATTTGGAAAGCACTGAAGAATTTATTGGCAAATATATTTTCATGTTTGAAGTAAAACAAAAATATCAAGAGA CAACAAACCTAAACACAGAGGTGAAACTTGCAGAGCATACAATACCATAAATCTCATTTTTGTTTTGGCTTTCCAAAAAA AATTCTCATGTTTTAAATACCTTGGGTCGATCATATAAGTGACGGGGAGGTGTAGGGAGATGTCAAATATAGGATTCAAG CAGGAGGAATGAAATGGAGGAGTGCTTTGGGGCTGATATTGATAGGTTACCGAATCTCGTTAGGTTAGTTAGAAGCTTGT TAGATTATTTAGATGGTTAGCCTATAAATAAGAGGGGGCTTAGAGAGGATTAGTCATCTTTTAGGGATCATTTGGGTTGG GACTTAGGGAGAGTGGCTGAGACTCTCAAATATCTCAGCAATCTTCTACATTTCTATTGTCAATAATATCAGGGTTCTAC CAGATATATGATAGAAACGTACCCCTAAAGCTGATAGGAATGATGTTGCAGGGATTTTAGTTTAGTGCAGAACAATTGAA AACAAAGGAGCAATATTGTTTCATCAAAAAGAAAAAAAGAGCAATATTGAGCGACGAATATTGTAAATTTTGATAGAAGA AAGATCAAGGGAATTCTCTTCTACTCATCAGCAATATTTACATTTATATGACTTGATATAAACTGAAAACTAGGAAGTTT CCAAGACCCTAGCAACATACCAACTTTCTCCTAAGATAAAGGAATAACTTATTGACCAGTGGGTACTTATTCAACACACT GAAGCTATTAAATTGTAGAATAAATTGGGGTAGCTCTTGTTGTAGAAATAGTAGAGTCTCATTTTAGGTGGTTTGGGTAT GAGTGCAGAAAACTCGCAAAAGCACCTGTAAAGAGAGTTGACTAGATGGAGGAGATGGAGGATGGTGAAATAGTTTAAGG CAGAGGAAGATTAAGGAATACTATAAATAAAAAAATTGAGAGAGATTTTGGGGTAAATGGTTTATCTTTAATTTTAGCAC ACAACAAGGAATTTTAGCGTCATGCTATCCCGGTAACCAATGTCCAAACCCCACCTAGTAGAAGAAGTCTTGGTTGTTAT TGATTTAAGTTGATATTTTGGAATCTTCATTTTCTTGTGGTATATGGCTCATGCAATAATGAATATTGGATGTTTTAATG TTTATAAGTTGATACATATAGTATTTTTTGAATTGAAGCGAGTTGATAAATATGTACTTGGTGATTCTTGTGGAAAACAC TTGCTTATATAACTTTTGAATTGTCTTGTCAAATATTTTTATTTATCGGTTTATGCTTTTCTAAATAGAGCAAAGATAAA TCAAACCATAATGCTGAGTTAATGTTGTCTTCCCGACTTTCAGCTGGATGGATAGGAAATGATGCTATTTCACCCATAAT TGGTGAGCATGACCCGTACATTCATGTATATGGTAGGGTAAGTATCACTCTGACTCAGTCATTGTATGTTTAGTCTTTGA CCTCTCTCTGCATTGATGATTTTACTTGTAAATCTTACAAACATATTTCATTTTCAGGCGCTGACTCATCTACATGTTGT CACTGTGCTTATGACCTTTATCATGGTTGTTGCCATTCTTACGTCAATAGCTATTGTTCGACGCATTCTTCTGGCAACTT CTGTTCTCAAGGCAAGCATAAACTGATCATATTCATTTATGAACTATGATAAAGTTTTTTTTTTGTTCATGTTATATATT TGATACCAATTATGTGTATTTTTTACCTCAAAAATATGTCTGAGGTTGAATTTCAAATCAGGGTTCTCTAAGTAATATAT GAATGTCATTTGCTATGCAATGTTGCCTTAGATGAACTCTTGTCACAAAGTTGGTGAATGTAAACAAATTAGCGTAAATT AACCTCCCCTTCAGTAAGGGCACTTCAGCACTCTTTCAATCTGCCTCCCTTTCTCAAGGTTTGGTGACAAAAATAACCTA TATGTAAATCCATACATTGCGTAGGCTTATGAAATAAAAGTTATTTCATAAAGTCTTGCGTAATAATGTTTCAATTATTG TTTCATGACATCTTTCAATACATGAGAAGCTATCTTTCAAGTCTGTATGTGAAAGCTTTTAATTACATGATATGAGGAAA AGAAAGTTTATATCTAGATCCAGGTAACTTAACTTTGAAACATCTTATTAAAATTTTGAAGATTTTTGTTGCCGCATAGG CAAGCACAAAGACATTAAACAAATATGTAATTTTGATGAAATGAAGAGGAAAACTATTAGATGGTGAGCAACATTAATTT GAATGTACCAGAAACATTTGGAGTAATTAAGAAACATACTCCTTTTCTATTAGTCTTTGTGGTTGAAGTAATTAAGAGAA AATACAAAACCAGTGTCAACTGTCAAGGGTCAAGATTCAAGACTGTTAGAATATAATATAAAACCATTAAAGTGACCCTT ACCCAAAAGCTTAAGCTTTTGGGATAAGTGGTTATTTGACATGGTATCAGAGCCTCTATGACCGAGTGGTCTAGAGTTCG ATCCTTGCTCCCCTCACTTTCTAATTAAAAAGTGGAATTTAATTAAGCACATGGTAGGTGGGCTTGTGCATTTATCCACG CTTCAAGCCCAAAGGGCTCTTGCATGAGGGGACGTGTTAGAATATAATATAAAACCATTAAAGTAGTCCTTACCCAACAG CTTAAGCTTTTGGGATAAGTGGTTATTTGACATGGTATCAGAGCCTGGTTACCCAAGAAATCCTAACCAAAGGATTACCC AAGAAATCCTTTGACAACATAACTAGCAAGCTGTCTATGGAGGATATCTTTAGGCCAGCTTGAGGGGGAGTGTCAACAGA CTGTGAAATAGAGCATTTAATGCTCTTAATTAGCAGTTATATTTTTGTTTGTATATAATTATGTTGTTTCCTGTTTGTAC TTAGTTTATTTTAGGTAGTTTCTTATTTTCATTCATTCTCCCTAATTCTCTCTTTAGTCAAGGATTTCCTTCTTTGACTT TGATCAATCACATTATGTAATTCCCTCTATAAGAAGAGGAATCCCTGTACAGTTTTTCATATCAATAATATTACCAAATA TTTCAACTTGGTATCAGAGCCTCTATGACCGAGAGGTCTAGAGTTCGATCCTTGCTCCCCTCACTTTCTAATTAAAAAGT GGAATTTAATTAAGCACATGGTAGGTGGGCCTGTGCATTTATCCACGCTTCAAGCCCAAAGGGCTCTTGCGTGAGGGGGC GTGTTAGAATATAATATAAAACCATTAAAGTGACCCTTACCCAAAAGCTTAAGCTTTTGGGATAAGTGGTTATTTGACAA AGACTATAATATGTTTGCAGCTGAATAAAATCAGCTTAATTCATAAGTGTGCCTACACCAATGGTGCTGAGTACTTACTA GGACCATGATTAAGTAATTCGAGTCAGGCATGTTAATAGCGCGCTATAGCTGCGCAATAGCGCTATAGCGTAGCGCCCTG GGGTTCACCATTACTCCACTATTCCCCGCTATTGTCTGCTATTTGCCGCTATGGCGCTTAAAATAGCGTTGTTTGGGCTT GCCCCTACGCTACACTATCCGCCATCGGCAACCCTGATTCGAGTACATGTATACCCCTGTCCTGGGCAATAATATTTTAG AGCTAAAGCCAATCTTGTTTATTCTGCATCTAGCAGCTGCTTAATTGAACTTTGATGGTACAGGTTTGACCAGCCATTTT CTTGTTTAACTATTACATTAATGAATGTTTTTTCCTTTTTTCCTCCTTTCTGACAAACCCATTTGTTGTAAACCATCTCA TTTTCATTATGAAACGTTTCTTTCATAACTTCTCTGATCTGTGCTCCCATCTAATACATTGGTTTTTGTATGTCATAAAG TCAACATAACTTCTCTTTCAGAAAAACAATACCTAGCCCAGAGACATGTAATGTGGTAAAACGTGGAAATGGTAGAATTA TTAGTAAGTTAGTAACTGTGTGATGATGATACTACATTATTTCCATTATGATAGTCAATTGATTTAATTGATTTTAATGC AAATATTGCTCATAGGTTGCTGCAAAAGTAATAGGAGAAGTTCAAGCACTTATTATTTTTCCAATCATTCCTTATGGTAT CCTTGCGGTGTTCTACATGTTCTGGATTTCTGCTGCGCTCCATTTGTTTAGCTCTGGTAAGGTTGTTTACAATAACTGCA ACTCTAACTGCTGCGCATATGACCTCATGGAGAAAAGGGTGATCTGTGATCATTGTTGTGGATATAGCATTCATTACACA CCACATATTGGAGTTGCCATCCTTTTTCACCTATTTGGGTGTTACTGGGCTACACAATTTTTCATAGCATGCTCATCAAC TGTGATTTCCGGATCTGTTGCCTCTTATTATTGGGCCCGTGGTGAATCATCTGTAAGTCAAAGCCTTGATCATAAATGAA TTGAATTATGCAATTCAAAGGATATTCAAAGAATGTGACTATCATTTAATCAGACACTTTATCTTTGAGATTACAAATTA TCCGTTACATAAGTTATTAAATGTGATTTATCTTTCCCACTGCAGCCAGAAATTCCTTTTCTTTCAGTGTTTTCCGCCAT GAAGAGGCTTATGTGTTACAGTCTTGGTTCTGTGGCTCTTGCCTCTCTTACTGTATCATTTGTAGAGTCAATTCGCTTCC TGCTTGAATCTATTCGCCGCAAACTGAAGGTCTCCGGTCACGTGCCTGATAGCTGGATTGGCAAGGCCGCACATCAATCT TCTCAATTTTTTCTAAGGTGTATTGAGTGGACCCTCAAATCAGTGAACCGGAATGCTTACATCATGGTATATTTAATAAT TTTCCATAAAACATTTATGCATGCATCATTTTGATAGATATGTGCTTATTATTTTGGTGCAATTATTCTTTAACAAATAA GAATATATAAGGACCAATGACAAGCCCATTTCTATATTATTCTTGTTTTGTAATCAGCAAGTTTGGGAGAGGCTGAATTG CACATGATGTATCTTTGGTGTGTTTTCTGTAGAACACTTCAAAATAAAGGGCAAAGCGTTTTTTCTTTAAATGTTGACAT GTTAAATAGTATATAGAGTTGCATGGTTACCCTCAACTTAGCTTTCTCTCTCCTTTTCCAAGAGACTTCTAGTACTTTCT TTTTGTGCACTTCAACACCAGAGGAAATCCTGGCTAGTTGCTATCCAGTTCCCAGAGGTGTATTCTACAACAAGTTGTAT AGAGAAATGTGAGAATAGTTCTGGGCCATAATAGAAGAGAGATGATAAATAAAGTTGAGGCTTAGTAAAAAAAAATTATG TACTAAGTATTAACCTTTATCATCTGTTTATACTCGTGGGTTGTTGCATTAAAAATGTTGAGTCAAATCCCCCTTCATTA GAAAAATGAATTGGCTTTCATGGGAGACGTATTGTATTACGATTTTGTTACTTAATTTTAATGTGATTCTACATTTCACT TGGTATATTTCTTTTGCATAGTTTTATTTATATTTTTATTCTGTACATCATTTCGGTTTAGAATTTTGTTACTTGTTTTT TCAATTTGTGCTTTAACTTCTCTCTAATATCTGCTTCACACCTGCAGATTGCTATAACCGGTAAAAGTTTCTTTCGAGCT TCTTCTATTGCAACAGAACTGATCATGAATAACATCCTACGAATTGGGCGCGTCAATGTGATTGGAGATGTTGTTTTATT TCTTGGAAAACTATGTGTCAGCCTCTCAAGTGCTGTTTTTGCTTTCCTCATGTTGGACACTCACAAGTACAAATCTGCAC ATAACAAGATCTCATCTCCGCTCTTTCCTGTGGTGGTATGTTTTCTATTATTTAACTAAGAGTAGGGTTTGAAGATCAAT TTGATAAAACTGGTAGTGATTGACACAAAGAAAATAACAGAAATGGAATGCCTAACCCAGAATCAAAGAGATTTTAAGCT AGAGAGAATGTAGTATTATTGAATTGGGGAAGAACACAAGAACTACGGTTTACAATTGATTCCCAATGAATCAATCTCTG GCTCCACAACCAGTCCAAACTCTAATTTCCCAAAAGATAACTTCCTCTAGAAGCTATAGCTATTTATAGCCTAACTGTTC TAACAGAACTAACAGCTCTAACAAACTCTAACCGCCAGCTGTATATTATCTGGCTTATTACACATAAGTCCCTGAGTTCT GTCATTATCACTGAAGGAATTGTATAATGTGCTTTTCATTGATAAACAACTGAGTATTTATATACAAAGGTCCTAGGCTA ATATTTAACTAGGGAATAAATCTAAGCGAGATTACATGCGTAATTACATGATAATAAATAAAGAATAAAGATTCTAATAT TATATTCTAACACACCCCCGCAGTCGAAGCTGGAGAGTCACCGATGCTGAGACTGGAACGAAAATCATCAAAAAGAACCC GGGAGAGGCCTTTCGTGAAAAGAACATAGCCATCAATCTCGAGAGTGGCCGAAGGAAACTCTGGGTGACCCGAAGAGGAG TAACCGCTGTCGGCGTAGGGAATCACCTTTGGCGTCGAAGAGCCGGGATCGGAATGTGATCTGCCATAAGATGGATCAGG GAAAAAATTAAAATTAAAGGAAATTTTTTTTATGTTTTAGGGAGCTGGGGCGGTTCAACCAGTTTGGGTGAACAAGTCCG GGTTGAACCGGGGAGATTCGGTTTTATGAAAAGAAGCCCGTTTAGCTAGGACCCGAATTTGGAGCGGGTTGGGCGCGGGC TGTTGAAGACGAAAGACGAACTTCACGTGGGTGACGTAGCAGGGGTGTCGGGGTGGGCTGGCGGGGTAGGAGGCTGCCTG GCGGATGCAAGGGACGCGGGCACAGTGGTGTGCAGCGCGGAGAGAGAAAGAGAGGCCATGGGGCGCGCATATGCTCGCGG ATCTGGGCAAGACACGACGGTGGACGCACGTGTAAGGAGCGACGACGTTGTTAGAAGGCGCGGCGGTTGGTGGCGAGCGA CGGTGGCAGCACTACAACTGTAGTGGGCGGCGGCAGCTGGTCGGTCCGGAAGGAGAAAGAGGCAGCGGCGGTAGGTATGG AAAGAGAAGGATTTTTTTTATATTTGAAGCAAACTGAAAAATAAGGCGGCGGAGGTGTACGAGCAGAGGGCAGAGGCAGC GGCTCAATCACGGCAAAGATCGCACGTGGGAGCGGCTCAATCACGGCAACCATCGCACGTGAGAGCGACGGTGACACTCG AATAGTAGAGTGCGGCGGCGGGGGCTCAGTAACGGCGAGGATCGCACGTGAGAGCAGCGGCGGCGGCAGCACGTTCCGAA GAAGGTGCGGCGGTCGTGGCAAAGGAATAAACAACAAAAAAACGTAAAAAAGAAAGACTGGCCTGTTTGTTTGCTGTTTT CAAAATAGTTTTCAGTTTTTAAAAACTGAAAACCTGTTTGGTGAGACCTGTTTTCAAAAACAGTTTTTGAAAAGAGTTCT CATTTTCAGTTTTTAAAACTAAAATACTAAAACAGCTAAAAGATGTTTTCAGTTTCAGTTTTTAGTTTTCAAATATCAGT TTTCTAAATGTTTGAAAACATGTCATTCAAACTGTTTTCTTCTTCTGAAAACTGTTTTTAAGAATTGTTTCTGAAAACTG TTTTAAAAACTGAAAACTAGAACTGCAATCAAACAGGCCCTAGGTCATAGGATTGGAACTAGCTTCTGATACGATGAAGG AATTGTATTCCGTGCTTTTCATTGATAAACAACTGAATATTTATATACAAAGGTCCTAGGCTAATATTTAACTAGGGAAT AAATCTAAGCGAGATTACATGCGTAATTACATCATAATAAATAAAGCATAGTTACAATTAATATTACATCCGTAATTACA TCATAATAAATAATTACATCTATTCTAATATTATATTCTAACAATCATAGTTACCGTTAACCAAAGCATAACATGATGGT AATTCAATTTGCCATTGATAAAAGGTGCAGTCTCCCATCTAGATAAATAGTTGGTGAAAATGTTGTTCTATTTATATGAA CTCAATAGGGTTTTCTTTCCCCTTAAAGGGTTCTGCAATCTGCATGGCTGACTAGAATTTTAACTTAGTATGTTTGGATA AGCTTAATCAGTTCTGACACCCTGACAGAAGCTTCTTTCCAATAATTGAGTTTGGCTTTAGAATCAATTTTAGAAGATTT TCCAAACATATAAATGCATTCAACATTACAATAACATATAACGTGCTAGCAAAAAGGATTACAAAGAGATGGAAAATAGT TACAAAAAATATTAATTTGCTCTAAACAAGTGGCAGAACCTAACATTGGATATTGTGTAATGCATGCAGGTTTGCTGGGC TCTTGGATATATTGTTGCAACTCTTTTCTTTGCAGTTGTAGAGATGTCAATTGACACCATCATTCTCTCATACTGCCAGG ATTCGGAAGAGCATGGGACACCACAGTATGCTCCTCCCCTTCTCATTGCAACTCTCAGTGACCAAAATGAGATGCAAAGA CTGACACAAGGAGCCTGATGAAATATTTCAGTGCATTATTTTCTCAGTGGTGACTTTCAACGGAGCTTAAGGATTTAGAA TTTTGTTTAGGAGCTTATTTTTGACACCTGAGTTCTGTTGTTACCCTTGTATATATATACTCCCTCCGGTCCTATTTATA AGCATGAAAGAGAAGAAAAAACTTGGTCCTTTTTAGAAGAACCAAATGAAAGTTTGAGCTATATTAATTAATTTTTTCCA ATGATGCCCTTATTAATTCTAACTTGTAAAATGTGTCTCATTAATTATTCTCTCTCTTTTCCACTTTCCAACACTAATAA CAAAGGGTAATTTTGGAAGTTCATTTTAATTTAAGATAAATTTAATGCATTTTATCTAGTTTAACTACATTTCTTAAACT ATGTGAATTTTTTTTTTGTTGCTTATAAATAGAACCGGAGGGAGTATATAATGTTGGACAAAAGTTCCCCTTGGTGGTTA GCATTTTAGGTAGTTTTATTTACCGATGGTTATGCTAGGATATTATGTTATGTGCACAAATAGAACAGAACAGATTCCGT AGTTGATCTTATTTAATCATATGATCTGTATCAAGATTGCATATTGTGAATTTATCTATATATAATGAGTGGAAAGTTTT GTCATAAATTTCAAGAAGCAGATGTGGTAAGTAAGATGGCAATAAAAGAAAATTCGAGAGATTGCATTCCCTAATACCAC TTTGGCTTAAAAACATTTCTTGCCCCCAATGTTTTATGTTTGTGCAAAAG
CDS sequence (LotjaGi3g1v0266300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGGGGTCCTTTGGGTGCAGTTGTTGGGAGGTATCCATCAAGTGATGGAACTACCCATTTGGGTGGAATCATAAGGCA CAGCAGGAAATGTAGAGACATACTTGTTCTTGTCATCTTTATAGCGTTCTGGATTTCCATGATTGTCAACTCCAGCTTTG CTTTTAACAAAGGAAACCCATTAATGCTTACTTTTGGGCTAGATTACAAAGGAAATGTGTGTGGGGACAAGCACGAAGGC CTTCACGAACTGGAGCTCAAATACTGGCTAAACCCTTATCAGGTTTATCAAAGTGGTTTGAAGGATAGTGAGTTCAAACT AGCCAATGCCCGCAGTATATGCTTGTTGGACTGCCCTAATCCTCCTGATGATTCACTAAGTTGGGTGTGTGATTATCCGG AAGGAGATATTCGTGTTTCAATGAATGACTGGATTGATATGAACTATGATTATTATGAGTTCCTTACGCCAGAAATGAAA AACTCCTCTCTTCAACTTCAGGGCCCTTGTTATCCTGTCATATTTCCTAGTATAAATGTTTACTGGAGTTGTCAGTTCAT TGCTCGAGCATCAAATTCGTCTTTAACACATTGGCAGAAGCTGGGTGGAGTCAACATAAATGAAGACATTGTCATTGATA AGTCCATTCACAAGCATATCAATTCTTGGTCAGCTGTCTTAAAGAGATACATGGCAGACATAGGAAAGGCATGGCCTGTG CTGATTGTTTGCGGAGGGATTTTACCTCTGTTTCTGTCTGTTATTTGGCTGGTAATGATTCGGCATTTTGTTACTGCAAT GCCTTGGATAACGGTGGTTTTATTTAATGTTCTAATAGTATCGGTTACAATGTTCTACTACCTAAAAGCTGGATGGATAG GAAATGATGCTATTTCACCCATAATTGGTGAGCATGACCCGTACATTCATGTATATGGTAGGGCGCTGACTCATCTACAT GTTGTCACTGTGCTTATGACCTTTATCATGGTTGTTGCCATTCTTACGTCAATAGCTATTGTTCGACGCATTCTTCTGGC AACTTCTGTTCTCAAGGTTGCTGCAAAAGTAATAGGAGAAGTTCAAGCACTTATTATTTTTCCAATCATTCCTTATGGTA TCCTTGCGGTGTTCTACATGTTCTGGATTTCTGCTGCGCTCCATTTGTTTAGCTCTGGTAAGGTTGTTTACAATAACTGC AACTCTAACTGCTGCGCATATGACCTCATGGAGAAAAGGGTGATCTGTGATCATTGTTGTGGATATAGCATTCATTACAC ACCACATATTGGAGTTGCCATCCTTTTTCACCTATTTGGGTGTTACTGGGCTACACAATTTTTCATAGCATGCTCATCAA CTGTGATTTCCGGATCTGTTGCCTCTTATTATTGGGCCCGTGGTGAATCATCTCCAGAAATTCCTTTTCTTTCAGTGTTT TCCGCCATGAAGAGGCTTATGTGTTACAGTCTTGGTTCTGTGGCTCTTGCCTCTCTTACTGTATCATTTGTAGAGTCAAT TCGCTTCCTGCTTGAATCTATTCGCCGCAAACTGAAGGTCTCCGGTCACGTGCCTGATAGCTGGATTGGCAAGGCCGCAC ATCAATCTTCTCAATTTTTTCTAAGGTGTATTGAGTGGACCCTCAAATCAGTGAACCGGAATGCTTACATCATGATTGCT ATAACCGGTAAAAGTTTCTTTCGAGCTTCTTCTATTGCAACAGAACTGATCATGAATAACATCCTACGAATTGGGCGCGT CAATGTGATTGGAGATGTTGTTTTATTTCTTGGAAAACTATGTGTCAGCCTCTCAAGTGCTGTTTTTGCTTTCCTCATGT TGGACACTCACAAGTACAAATCTGCACATAACAAGATCTCATCTCCGCTCTTTCCTGTGGTGGTTTGCTGGGCTCTTGGA TATATTGTTGCAACTCTTTTCTTTGCAGTTGTAGAGATGTCAATTGACACCATCATTCTCTCATACTGCCAGGATTCGGA AGAGCATGGGACACCACAGTATGCTCCTCCCCTTCTCATTGCAACTCTCAGTGACCAAAATGAGATGCAAAGACTGACAC AAGGAGCCTGA
Protein sequence (LotjaGi3g1v0266300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MRGPLGAVVGRYPSSDGTTHLGGIIRHSRKCRDILVLVIFIAFWISMIVNSSFAFNKGNPLMLTFGLDYKGNVCGDKHEG LHELELKYWLNPYQVYQSGLKDSEFKLANARSICLLDCPNPPDDSLSWVCDYPEGDIRVSMNDWIDMNYDYYEFLTPEMK NSSLQLQGPCYPVIFPSINVYWSCQFIARASNSSLTHWQKLGGVNINEDIVIDKSIHKHINSWSAVLKRYMADIGKAWPV LIVCGGILPLFLSVIWLVMIRHFVTAMPWITVVLFNVLIVSVTMFYYLKAGWIGNDAISPIIGEHDPYIHVYGRALTHLH VVTVLMTFIMVVAILTSIAIVRRILLATSVLKVAAKVIGEVQALIIFPIIPYGILAVFYMFWISAALHLFSSGKVVYNNC NSNCCAYDLMEKRVICDHCCGYSIHYTPHIGVAILFHLFGCYWATQFFIACSSTVISGSVASYYWARGESSPEIPFLSVF SAMKRLMCYSLGSVALASLTVSFVESIRFLLESIRRKLKVSGHVPDSWIGKAAHQSSQFFLRCIEWTLKSVNRNAYIMIA ITGKSFFRASSIATELIMNNILRIGRVNVIGDVVLFLGKLCVSLSSAVFAFLMLDTHKYKSAHNKISSPLFPVVVCWALG YIVATLFFAVVEMSIDTIILSYCQDSEEHGTPQYAPPLLIATLSDQNEMQRLTQGA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 33 | 33 | - | – | |
| PANTHER | 5 | 688 | 684 | 0.0 | ||
| PANTHER | 5 | 688 | 684 | 0.0 | – | |
| Phobius | 34 | 55 | 22 | - | – | |
| TMHMM | 34 | 56 | 23 | - | – | |
| Phobius | 56 | 236 | 181 | - | – | |
| Phobius | 237 | 260 | 24 | - | – | |
| TMHMM | 237 | 259 | 23 | - | – | |
| Phobius | 261 | 265 | 5 | - | – | |
| TMHMM | 266 | 288 | 23 | - | – | |
| Phobius | 266 | 288 | 23 | - | – | |
| Phobius | 289 | 318 | 30 | - | – | |
| TMHMM | 319 | 341 | 23 | - | – | |
| Phobius | 319 | 341 | 23 | - | – | |
| Pfam | 325 | 667 | 343 | 1.6E-79 | ||
| Phobius | 342 | 360 | 19 | - | – | |
| Phobius | 361 | 382 | 22 | - | – | |
| TMHMM | 361 | 383 | 23 | - | – | |
| Phobius | 383 | 446 | 64 | - | – | |
| TMHMM | 434 | 456 | 23 | - | – | |
| Phobius | 447 | 466 | 20 | - | – | |
| Phobius | 467 | 485 | 19 | - | – | |
| Phobius | 486 | 511 | 26 | - | – | |
| Phobius | 512 | 592 | 81 | - | – | |
| Phobius | 593 | 614 | 22 | - | – | |
| TMHMM | 593 | 614 | 22 | - | – | |
| Phobius | 615 | 625 | 11 | - | – | |
| Phobius | 626 | 651 | 26 | - | – | |
| TMHMM | 629 | 651 | 23 | - | – | |
| Phobius | 652 | 696 | 45 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0266300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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