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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0283700 |
| Transcript ID | LotjaGi3g1v0283700.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Triosephosphate isomerase; TAIR: AT3G55440.1 triosephosphate isomerase; Swiss-Prot: sp|P48491|TPIS_ARATH Triosephosphate isomerase, cytosolic; TrEMBL-Plants: tr|I3SUT5|I3SUT5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0283700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:57082193..57086694) extracted from Lotus japonicus Gifu genome v1.2.
GAAAAATAAATAAATAAATAAAGACCGAAAAAAATAGAAAAAGACCTAAAGAATATTCGTTTTATCTTGCGTTGTTGTTA TAAACTGTGCTTCGACGGTAACTCACAGTCACAGTTGTAATATTGTATTGTTGTAGAACAACAACAACAACAACAACAAG AGGGTTTTTCAGTTTCTCGTTGAAATCGAAACAACAACAACAAAACCATGGGCCGAAAATTCTTCGTTGGTGGCAACTGG AAATGCGTATGTTCTTCTTCATCTCTTCTTTCTATGTCTGAATTTGTTTGGATCTCGATCAATGATTCGATTGATTGTCT CTGACCTCTGAAACTATCAGATCTGAGTGGTTAATTTCTGTTTGGATTCATTTGATGTGCGATCCCCTTTTTCTGATCTA ACAAGTGTGAATCCTTAAACCTTCTTGCTCAAAGCAATTATTCGGTTGAATTTATTGTAATTGGTTTGGTAGATCTGTTT TTTTTTCCATGGATCTGTACTTGTTGTTCGCGTTATGGAAGTAATTAGATTTACTCTGCGTTTTGGATATCTGTTCAAGT GATGCATGTAAGTAACTGATGATTTGAATTGTCTTTTTTGCAGAATGGTACCACTGAACAGGTGAAGAAGATTGTTGGTA CTTTGAACGAGGCTAAAGTCCCTGGAGAAGATATTGTGGGTGAGTCTTAACAAGCTTTCTGATGGGTTTAATTTATCTTT TTCATGCTCTGATTAGCTCACTCTTGGTAATAGTAGCCTATCAAATGGGTTTAATATTGAGGTTCCTCTAGAACTACTCA GTAGCTGCTTCTGAGGTTGCTAACAATTTGATAGTATAAGTTATAAAGTTATGCCCAAATAGATAATTTTTAGAAGAAAT GCAAATGCAAAATACCAATTACATATAATACACGAGCATCGGACACCATCCTATACCGCCAAAGTATTTAAGTCCATTAG AAATTTCAAAACTGAAGAGGTAGCCCTTCTAAGTTTTGAGCTGTTAACACTTAAATTAGGAAAATGCATTATGTCCCGAA CTGAAGCCAATGAATCCACATGGCCATGTATTCCAAATTTTTTCCTTCTCACTCCTATGACTACGTGTAGGTTCCCTTTT GTGCGATTGGCCATAAACTTTATTTGCGAGTTTTGTTGAAAATTTATTCGGGACAAATAGCAATGTTCCTTAAATTATTT GCCAGACAGAATGACGTTTCAGATTCTGGTGTACTATACCATATGTATTGTGCATCTGCATTTATTCTAAAAATATTTGC ATATCTATTCGGGTTTTAACGTAATATCAAGTTGTTAGCAATCTCTGTATCTATGAATTATTATTGTATTTCCATTATTT TATTTAGTGCATTTCATCCAAGTTTTATTGTCTTGTTGATGATGATGTTGACATATGCTAATAAACGGTTCCTTTTTTAC AGAGGTTGTTGTGAGCCCTCCTTTTGTGTTCCTATCATTTGTAAAAGCTTTACTCCGATCTGACTTCCATGTTGCTGCTC AAAACTGTTGGGTTCACAAAGGTGGTGCTTATACCGGGGAGGTTAGGTATGCTATATTTATGTTCTCCAAGTGATTTCAT TTTGGTGCTTTCCATTTTGTTTGTATTGCTCATGACTTCCAGTAGTATGTTTAGAAAACTAGGCTTTTCCCATTTTCTCC AATTAGGATGCTAAAATCAATGGAGAATCACACTTTTCTTTGAAAAATGTGAAAGGGGGGCTCAATAGCTCTGCCAGATG AGATGTTCTTTTACTCTTTTTTCGCAACTACAAACACACTCGCCAGGGTTTTAATTTTTATTTCTTTTCTGTGTTTTATT AATAGTGAAGTGCATCTTACCCTTCATTTAATCCCTATGAATTATGTCTTTTGCATTAACAGTGCTGAAATGCTTGTGAA TTTGGACATTCCATGGGTTATTCTCGGTCACTCTGAACGAAGAGCGCTCTTAAAAGAATCAAGTGAGGTACAAATTGTCC AATTGCCTTTGGTTTATATTTTAAAAATTTCCTCTGTTGATTGTATGATGATTCTACTTTGTGTAGTTACTTGTATACTT GTATTAGCAATATTTTAAATTTTCCGATTGATATTTGCCCATTTTCCCTGCATTGTCTATTACAGTTTGTGGCTGATAAA GTAGCATATGCACTTTCACAAAATCTGAAAGTTATTGCTTGCATTGGGGAGACTCTTGAACAGCGTGAAGCTGGTACAAC ATTGGCTGTTGTTTCTGAGCAAACAAAAGCAATTGCAGGTACATTTCCCTCCATTCATCTGAATATTGTATATTCATGAA AAAATATTTCTCACATATTATATTGAATTACTTACAGTTCTGGTTAAAAAGCAATTTCCAATTGCATTAAATGATTGTCA TTATTTCATCGCTTGCTATTTTGCTGGTAATCAATTTTTGTACTGACCTCAATACTGTTTGCAGCTAAAATATCAAATTG GGATAATGTTGTTTTGGCCTATGAGCCAGTTTGGGCCATTGGAACAGGAAAGGTTGCAACTCCTGCTCAGGCACAAGAGG TAGGCGCTTACTCGCTTACCTTTATTTCATATATAACATTATTCTTTCAATGAAAATTTATTTGCCACTATCTTTTTGTA AAAAAACAAAGAAATCACTGTTTTCTTATCTTTGCTCTTGTGCCAAATTAGACAGTTGACAATCTCCTCTTGTGTGTGGA AGTAACCTTTCTTGATACTATTTGTCGGTTGTTTGGCGTAGGTCCATGCTGATTTGAGGAAATGGATTCATGACAACGTG AGTGCTGAAGTTGCTTCGACTGTGAGAATTATCTATGGAGGTACTTCCCTTCGTACTTTACTCTGTATCGATGTATCAAT GCAGTTCCTTAGATGTGAAAGAAAAAGCATGTTGTGATTTATAATATATTAGAGAAAGCTGAGGTGAAGCAAATGAGGTG ACGTTCACTATGGACAACCACAAACAAGTTTGTTATAACTTTGAGTTTGGTCCATTAGAGGATGCTCTGGCATCTTTCTT ATATGTAATTTTGTATTATTTGTATAATATTCGGAGGTGTTATGTTGTCTATTCCCCTGGTCCTTGGAGGTTTCTGATTG GTATATCAAGATGAGTTGACCGTCACATTAGTAATTTCTTATTAAAGTACCAAATATTTACTGCAGGTTCTGTAAATGGA GCAAACAGCAAAGAATTGGCAGGACAGGCTGATGTTGATGGATTTTTGGTTGGCGGTGCTTCCTTGAAGGTGATTTTTCT TTAGCCATTATTTTGGTTGTGTTCTGTTTCTTGCTTTGCATTTATGAAACTGACTTCTGCACTTTCTGAAATTAGCCGGA GTTCATCGACATCATCAACGCCGCCACCGTGAAGAACTGAAATTGGTAGTCAGGAACTTGTATGCTGCCTTTCAAGCTGC TTCGGAAATTGCTGTGTTTGAGCTTTAATTCCTTGTTTTGTGGCTAATGCTTTGGACTTGTGTTTAGTACTTAATAAATA TGATTTCCTGTTACTTAATCAGTTGGGATCAGTTGGATTTTTTGTTTAGTTTATGAGCAAAAATAGTATAACTGCCATAA CAGTTGGTGGGAAAATAATGTTGAACGCCAGAGTTTTTGTTGAATGTGCTTTTATCTTCATTTTGTTTGCGTCTATTGAT ACTCTTGCCATTTAGATTGTGTTTGGTCCAGGGATGTGTACTTACATTTGAGCCACTATCCTCCATGTGGTTCTGACTCA GTGATCCTCCTTTGTCCCTCATGATTATTTTCATCGACAGAGATGACTTGATTTCCCGTTTATGCTATCTGTAAGTGGTT GTTTCAGACAAAAATAACGAATTGCAAAAGTTTCATCGTATTAAACTTATCATATTAGATTATCATGAATGTGTGAATTA GCTTTTAATACAATTGGACGTTATTTGAACGTAAATCCACGAAATAATAGAATTTTCAATTATCAAAATTGACATTCGAT TTAGACATGATATGATAATACAACCACTAAAAGATGAAGCTACATATATTTGCCCATATGAAATCAAAAGTGATTTTGTC GTATCCTTCTACTAACTACTAACTACTAAGCCTTTAAAATGCTATTAATATATGAAGTGTTGAGGGAGTCAACTTAGAAA AATAGTGAAGAAAAGTGTTGAGGGAGTCAACTTAAGAGGTTTTTTTGTTTTTTTTTTTTAATGAATTTCATTTTTTATGG GATGTATGCAGCTTACTTATTTTCTTTCCAAGTTTTGTTTATCAAATCCAAACGATGTATGGGTTGGTATAACTCCTATT TGTATCCAGTTTGTTGTTCTTTCAGACTTTTTACCGGGAAGGTTTTAATGAAGATATATCTTGCAGTAAACAAAATATAC GCTTAATGAAATTACACAAGTATTGAGTGGTGTTGCTTGTATGAGATTTTAACGCTATCTCCAGAGCAATCATGAATTAT CAAACAAGCAAAATAACATCAA
CDS sequence (LotjaGi3g1v0283700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGCCGAAAATTCTTCGTTGGTGGCAACTGGAAATGCAATGGTACCACTGAACAGGTGAAGAAGATTGTTGGTACTTT GAACGAGGCTAAAGTCCCTGGAGAAGATATTGTGGAGGTTGTTGTGAGCCCTCCTTTTGTGTTCCTATCATTTGTAAAAG CTTTACTCCGATCTGACTTCCATGTTGCTGCTCAAAACTGTTGGGTTCACAAAGGTGGTGCTTATACCGGGGAGGTTAGT GCTGAAATGCTTGTGAATTTGGACATTCCATGGGTTATTCTCGGTCACTCTGAACGAAGAGCGCTCTTAAAAGAATCAAG TGAGTTTGTGGCTGATAAAGTAGCATATGCACTTTCACAAAATCTGAAAGTTATTGCTTGCATTGGGGAGACTCTTGAAC AGCGTGAAGCTGGTACAACATTGGCTGTTGTTTCTGAGCAAACAAAAGCAATTGCAGCTAAAATATCAAATTGGGATAAT GTTGTTTTGGCCTATGAGCCAGTTTGGGCCATTGGAACAGGAAAGGTTGCAACTCCTGCTCAGGCACAAGAGGTCCATGC TGATTTGAGGAAATGGATTCATGACAACGTGAGTGCTGAAGTTGCTTCGACTGTGAGAATTATCTATGGAGGTTCTGTAA ATGGAGCAAACAGCAAAGAATTGGCAGGACAGGCTGATGTTGATGGATTTTTGGTTGGCGGTGCTTCCTTGAAGCCGGAG TTCATCGACATCATCAACGCCGCCACCGTGAAGAACTGA
Protein sequence (LotjaGi3g1v0283700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGRKFFVGGNWKCNGTTEQVKKIVGTLNEAKVPGEDIVEVVVSPPFVFLSFVKALLRSDFHVAAQNCWVHKGGAYTGEVS AEMLVNLDIPWVILGHSERRALLKESSEFVADKVAYALSQNLKVIACIGETLEQREAGTTLAVVSEQTKAIAAKISNWDN VVLAYEPVWAIGTGKVATPAQAQEVHADLRKWIHDNVSAEVASTVRIIYGGSVNGANSKELAGQADVDGFLVGGASLKPE FIDIINAATVKN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 251 | 251 | 3.3E-147 | – | |
| PANTHER | 1 | 251 | 251 | 3.3E-147 | ||
| Gene3D | 1 | 252 | 252 | 2.1E-108 | ||
| Hamap | 3 | 247 | 245 | 57.692 | ||
| SUPERFAMILY | 3 | 247 | 245 | 2.88E-92 | ||
| ProSiteProfiles | 4 | 247 | 244 | 81.8 | ||
| CDD | 5 | 246 | 242 | 4.53665E-125 | ||
| Pfam | 6 | 245 | 240 | 1.5E-87 | ||
| TIGRFAM | 6 | 240 | 235 | 1.6E-89 | ||
| ProSitePatterns | 164 | 174 | 11 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Molecular function | Triose-phosphate isomerase activity | Catalysis of the reaction: D-glyceraldehyde 3-phosphate = glycerone phosphate. | ||
| Biological process | Glycolytic process | The chemical reactions and pathways resulting in the breakdown of a carbohydrate into pyruvate, with the concomitant production of a small amount of ATP and the reduction of NAD(P) to NAD(P)H. Glycolysis begins with the metabolism of a carbohydrate to generate products that can enter the pathway and ends with the production of pyruvate. Pyruvate may be converted to acetyl-coenzyme A, ethanol, lactate, or other small molecules. |
Expression pattern of LotjaGi3g1v0283700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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