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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0287500 |
| Transcript ID | LotjaGi3g1v0287500.4 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein DETOXIFICATION; TAIR: AT1G51340.2 MATE efflux family protein; Swiss-Prot: sp|Q9SYD6|DTX42_ARATH Protein DETOXIFICATION 42; TrEMBL-Plants: tr|V7BWP1|V7BWP1_PHAVU Protein DETOXIFICATION; Found in the gene: LotjaGi3g1v0287500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:58130961..58134365) extracted from Lotus japonicus Gifu genome v1.2.
TTCCCAGATATGGCAGAGAAAGAGAGTCTGTATTCATCAGGTGATTGGAGGAGAATATCAACTTGCACTTTCTTTAAGGA TGCCAGGTATGATATAATTCAACACTACATTCATTTTTTTTTTTCCATTTCATCAATTTATTTATGCTGTTGTTCTGATT TACCCATTGTGACTCTTGATTTTCTTGTCACTGCAGGCTAGTTTTTAAATCAGATAGTCTTGGTCGCGAAATATTGTCCA TTGCATTGCCTGCAGCAATGGCTTTGACAGCTGACCCTATTGCTTCACTAGTTGACACCGCTTTCATTGGCCAAATAGGT ACCTTCTGTTATTACTTATTAGTTTATTATCTTTGAGCTAGAACCATAGGGAAATGAAATGTTGATCCAACTTGAAAATT GGAGAGGGGAAAATAAATTTCTTATTATGCATCTAGTGTTGAATATTGTTGGTCCATACAGGTCCAGTGGAGCTTGCTGC TGTAGGAGTTTCCATAGCTCTCTTCAATCAAGTATCAAGGATTGCGATATTCCCACTCGTCAGTGTGACAACCTCTTTTG TGGCTGAGGAAGATGCCCTCGGTGGAGCACACTCCCAGGAGGAGAGTAGAGAATTGGAAGCGGGTCTGAAAATGGATAAT GATGCCATAAAGTTATTACAAAAAAAGGGTATCATTTCTCCCACTTCTCTTGTTGGTTTGGATTCACTTAAGTTTTCTTG GTAGGGTCTTATTTCCCCATAGGAAAGCCAATAAAAACTTATCTAGACTCTTGTTTTCTCGGTCCATTTCAGATGAAAGT TTTCACAATTCAGATTCGGCCGGCGTAAACTTCAATATTGTTAAGGAGGAATGTACGAAACGACATATCCCTTCAGCTTC ATCAGCATTATTTTTTGGTGGTATCCTAGGCATCATCCAAGCAGTATTACTTATATCTGCAGCAAAACCATTATTGAACT TCATGGGAGTAACTTCTGTAAGTACTTTTGTTGGCTGGTAGCACTTTGGCATTTATTTAGAACCTTATGCTATTGTCAAA TAACATAATTGTTTATACAGGACTCTCCTATGCTACACCCTGCACAGCGGTATCTAACATTGCGGTCCCTTGGCGCTCCT GCAGTTCTTCTCTCGTTGGCGATGCAGGGAGTCTTTAGAGGATTTAAAGACACTACAACTCCTTTATATGCAACAGGTGG CCTTGACAAACTTAAATTGCTATTGATCTAGTGTCACAATGGTCCTGTTTGGATGTGTGGTCTTTGGAGCTTATCTACTA AAAAGCACTGAATAAGCTCAAATAAGTACTCTTTGATCTGCATCCAAACATGCTCTATATCTTGTTATCATCTGATTCTA ATTACTATTTGTTTGATGTAATCTAGTTGCAGGAGATGTGACCAACATAGCACTGGATCCTCTATTCATGTTTGTGTTCC GAATGGGTGTCAGTGGCGCAGCCGTTGCCCATGTCATATCTCAGTATGTTTATTATTTCATTGTGAATTAAATGCTCTGA TTATACTCTTGTTTAAGTACTGATCAGTCTGCCAATTACTGTATCTAGAACTATCTTGTCCTTTGTCTCTTCTTTCCCTG TTGCATCTTTTGACCTAATCTTCTTTTATTTTCAAATTGGTTGTAAATGTAGGTACCTAATTTCAGTTATACTCTTGTGG AAGTTGATGGAACAAGTTGATCTTATACCTCCAAGCATCAAACATTTGCAATTTGACCGATTTGTTAAAAATGGTATCGG TCTACTGTTCCTATAAAAATTTATTTATGCTTCTCTTTTCTCCTATTTCTTTCAAATTGATGCTTTTATTGATTGTTTCC CTTGGATATAGGTCAACTAATATTTTAGCATTGACACTTGACACTATTATTGTTCTTTCCTGTTTAATTCTTGTCATTCA GGTTTTCTATTATTAATGAGAGTCATTGCTGTTACATTCTGCGTGACACTGGCCGCATCCCTAGCTGCACGCCAGGGAGC AACATCGATGGCTGCATTTCAAGTTTGTCTGCAGATTTGGTTGACAGTGTCTCTTCTTGCTGATGGTCTGGCTGTTGCTG GGCAGGTAAGATATGATTACACATTTACACTGTCCATTAAACACCTTGTTGTGTTGATTCATGATGGTTTCATATCAAAA CATTGGATAATTGTCAATTGTCTCTCTAAAGCACAATCTGGTTCTATGAGTTCATATGACTTGCAAAATAACACAATCTT GGTTTCAGGCTATTCTTGCTGGAGCATTTGCTAATAATGACTATGAAAAGGCCACGGAAACTGCATCCCGAGTGTTACAG GTGCTTAAGAATGTTAAAAGAAATCGTGTGTCCTTTTTCAAGACATTAAATTGTGAATGTGACGGATAATGATAATGCAG ATGGGTGTGGTTCTAGGATTAGCACTTGCTTTCATTCTTGGAGCGGGATTGCACTTTGGAGCTAAACTATTTACAAAAGA TGTTGATGTCCTCCACCTCATTAGAGTTGGGGTCCCGGTAATTTATTCATGTTCAAATTGAAAGTGATATTGGTAATCTA TTCATTTCAACCCCCCAAAGAGTGGAACTTATATTGATGTTAATGTTATTTTTTTTTTGTTACAGTTTGTTGCACTCACT CAACCCTTGAATGCTTTGGCTTTTGTATTTGATGGTGTCAACTTTGGAGCATCTGATTTTGCATATTCAGCCTTCTCCAT GGTTTGTATTTATCTTCAATGATTCATCTGCTATTATAAGTGCCATATTTTAAGCTATCCATGCCCCCACCCATTTTTTG TTCCTCTCTAATCTCACTCACGACTCGTCAAAAATTGTCAAGTCTGACCTCGACTAGAGATAACTAATGAAGTACTTATC AATGGGAGGAAAATGCTCACCCATTGCCTCTCAGCTAGATTTTTGGGTGTAGTTAGGCCCAATGCGAATTCTAATATGGT ACTAGAGCCAATTCTCTAGGCTTGACGGGGTGTTAAGTCAACTTATAAATAAGAGGGAAATCCTCATTCCTGTGCTAGAA CAATTTGCAAAAAGAGGATGCAGGAGGGTTAGAGCCAATCTAAATTTTATTTAATTCAATCATGGTATTCTTCATTCTCA GGGTGTGGTAGCAATTATCAGCATCATTTGTCTGCTTATTTTGTCTTCTGCTGGCGGTTTCATTGGAATTTGGGTTGCTT TGACCATCTATATGAGTCTAAGGGCATTTGCTGGCTTCTTGAGGTAATGATTTTCTAATTTTTTTTTCCTGAAGTTTATC TTTGATACTTTTCTTTTCACTGTCAAGACAGTTGATACATCTATGAGGTCAAGACGGTAACTAATGAAAAATGTTGATGC AGGATTGGAACAGGATCAGGACCATGGGAGTTTCTTAGGTGCTGA
CDS sequence (LotjaGi3g1v0287500.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAGAGAAAGAGAGTCTGTATTCATCAGGTGATTGGAGGAGAATATCAACTTGCACTTTCTTTAAGGATGCCAGGCT AGTTTTTAAATCAGATAGTCTTGGTCGCGAAATATTGTCCATTGCATTGCCTGCAGCAATGGCTTTGACAGCTGACCCTA TTGCTTCACTAGTTGACACCGCTTTCATTGGCCAAATAGGTCCAGTGGAGCTTGCTGCTGTAGGAGTTTCCATAGCTCTC TTCAATCAAGTATCAAGGATTGCGATATTCCCACTCGTCAGTGTGACAACCTCTTTTGTGGCTGAGGAAGATGCCCTCGG TGGAGCACACTCCCAGGAGGAGAGTAGAGAATTGGAAGCGGGTCTGAAAATGGATAATGATGCCATAAAGTTATTACAAA AAAAGGGGTCCATTTCAGATGAAAGTTTTCACAATTCAGATTCGGCCGGCGTAAACTTCAATATTGTTAAGGAGGAATGT ACGAAACGACATATCCCTTCAGCTTCATCAGCATTATTTTTTGGTGGTATCCTAGGCATCATCCAAGCAGTATTACTTAT ATCTGCAGCAAAACCATTATTGAACTTCATGGGAGTAACTTCTGACTCTCCTATGCTACACCCTGCACAGCGGTATCTAA CATTGCGGTCCCTTGGCGCTCCTGCAGTTCTTCTCTCGTTGGCGATGCAGGGAGTCTTTAGAGGATTTAAAGACACTACA ACTCCTTTATATGCAACAGTTGCAGGAGATGTGACCAACATAGCACTGGATCCTCTATTCATGTTTGTGTTCCGAATGGG TGTCAGTGGCGCAGCCGTTGCCCATGTCATATCTCAGTACCTAATTTCAGTTATACTCTTGTGGAAGTTGATGGAACAAG TTGATCTTATACCTCCAAGCATCAAACATTTGCAATTTGACCGATTTGTTAAAAATGGTTTTCTATTATTAATGAGAGTC ATTGCTGTTACATTCTGCGTGACACTGGCCGCATCCCTAGCTGCACGCCAGGGAGCAACATCGATGGCTGCATTTCAAGT TTGTCTGCAGATTTGGTTGACAGTGTCTCTTCTTGCTGATGGTCTGGCTGTTGCTGGGCAGGCTATTCTTGCTGGAGCAT TTGCTAATAATGACTATGAAAAGGCCACGGAAACTGCATCCCGAGTGTTACAGATGGGTGTGGTTCTAGGATTAGCACTT GCTTTCATTCTTGGAGCGGGATTGCACTTTGGAGCTAAACTATTTACAAAAGATGTTGATGTCCTCCACCTCATTAGAGT TGGGGTCCCGTTTGTTGCACTCACTCAACCCTTGAATGCTTTGGCTTTTGTATTTGATGGTGTCAACTTTGGAGCATCTG ATTTTGCATATTCAGCCTTCTCCATGGGTGTGGTAGCAATTATCAGCATCATTTGTCTGCTTATTTTGTCTTCTGCTGGC GGTTTCATTGGAATTTGGGTTGCTTTGACCATCTATATGAGTCTAAGGGCATTTGCTGGCTTCTTGAGGATTGGAACAGG ATCAGGACCATGGGAGTTTCTTAGGTGCTGA
Protein sequence (LotjaGi3g1v0287500.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAEKESLYSSGDWRRISTCTFFKDARLVFKSDSLGREILSIALPAAMALTADPIASLVDTAFIGQIGPVELAAVGVSIAL FNQVSRIAIFPLVSVTTSFVAEEDALGGAHSQEESRELEAGLKMDNDAIKLLQKKGSISDESFHNSDSAGVNFNIVKEEC TKRHIPSASSALFFGGILGIIQAVLLISAAKPLLNFMGVTSDSPMLHPAQRYLTLRSLGAPAVLLSLAMQGVFRGFKDTT TPLYATVAGDVTNIALDPLFMFVFRMGVSGAAVAHVISQYLISVILLWKLMEQVDLIPPSIKHLQFDRFVKNGFLLLMRV IAVTFCVTLAASLAARQGATSMAAFQVCLQIWLTVSLLADGLAVAGQAILAGAFANNDYEKATETASRVLQMGVVLGLAL AFILGAGLHFGAKLFTKDVDVLHLIRVGVPFVALTQPLNALAFVFDGVNFGASDFAYSAFSMGVVAIISIICLLILSSAG GFIGIWVALTIYMSLRAFAGFLRIGTGSGPWEFLRC
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 170 | 170 | - | – | |
| PANTHER | 17 | 515 | 499 | 2.1E-250 | – | |
| PANTHER | 17 | 515 | 499 | 2.1E-250 | – | |
| CDD | 34 | 506 | 473 | 8.85838E-112 | – | |
| TIGRFAM | 44 | 486 | 443 | 1.4E-132 | ||
| Pfam | 168 | 259 | 92 | 7.9E-12 | ||
| Phobius | 171 | 193 | 23 | - | – | |
| TMHMM | 172 | 194 | 23 | - | – | |
| Phobius | 194 | 212 | 19 | - | – | |
| Phobius | 213 | 233 | 21 | - | – | |
| TMHMM | 214 | 236 | 23 | - | – | |
| Phobius | 234 | 261 | 28 | - | – | |
| Phobius | 262 | 288 | 27 | - | – | |
| TMHMM | 266 | 288 | 23 | - | – | |
| Phobius | 289 | 313 | 25 | - | – | |
| TMHMM | 313 | 335 | 23 | - | – | |
| Phobius | 314 | 335 | 22 | - | – | |
| Pfam | 318 | 471 | 154 | 1.9E-13 | ||
| Phobius | 336 | 346 | 11 | - | – | |
| TMHMM | 347 | 369 | 23 | - | – | |
| Phobius | 347 | 370 | 24 | - | – | |
| Phobius | 371 | 389 | 19 | - | – | |
| TMHMM | 389 | 411 | 23 | - | – | |
| Phobius | 390 | 412 | 23 | - | – | |
| Phobius | 413 | 423 | 11 | - | – | |
| TMHMM | 423 | 445 | 23 | - | – | |
| Phobius | 424 | 445 | 22 | - | – | |
| Phobius | 446 | 456 | 11 | - | – | |
| TMHMM | 455 | 477 | 23 | - | – | |
| Phobius | 457 | 476 | 20 | - | – | |
| Phobius | 477 | 482 | 6 | - | – | |
| TMHMM | 482 | 504 | 23 | - | – | |
| Phobius | 483 | 504 | 22 | - | – | |
| Phobius | 505 | 516 | 12 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Antiporter activity | Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy. The reaction is: solute A(out) + solute B(in) = solute A(in) + solute B(out). | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Xenobiotic transmembrane transporter activity | Enables the directed movement of a xenobiotic, a compound foreign to living organisms, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi3g1v0287500.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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