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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0287500 |
| Transcript ID | LotjaGi3g1v0287500.5 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein DETOXIFICATION; TAIR: AT1G51340.2 MATE efflux family protein; Swiss-Prot: sp|Q9SYD6|DTX42_ARATH Protein DETOXIFICATION 42; TrEMBL-Plants: tr|A0A0R0H798|A0A0R0H798_SOYBN Protein DETOXIFICATION; Found in the gene: LotjaGi3g1v0287500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:58130970..58134365) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCAGAGAAAGAGAGTCTGTATTCATCAGGTGATTGGAGGAGAATATCAACTTGCACTTTCTTTAAGGATGCCAGGTA TGATATAATTCAACACTACATTCATTTTTTTTTTTCCATTTCATCAATTTATTTATGCTGTTGTTCTGATTTACCCATTG TGACTCTTGATTTTCTTGTCACTGCAGGCTAGTTTTTAAATCAGATAGTCTTGGTCGCGAAATATTGTCCATTGCATTGC CTGCAGCAATGGCTTTGACAGCTGACCCTATTGCTTCACTAGTTGACACCGCTTTCATTGGCCAAATAGGTACCTTCTGT TATTACTTATTAGTTTATTATCTTTGAGCTAGAACCATAGGGAAATGAAATGTTGATCCAACTTGAAAATTGGAGAGGGG AAAATAAATTTCTTATTATGCATCTAGTGTTGAATATTGTTGGTCCATACAGGTCCAGTGGAGCTTGCTGCTGTAGGAGT TTCCATAGCTCTCTTCAATCAAGTATCAAGGATTGCGATATTCCCACTCGTCAGTGTGACAACCTCTTTTGTGGCTGAGG AAGATGCCCTCGGTGGAGCACACTCCCAGGAGGAGAGTAGAGAATTGGAAGCGGGTCTGAAAATGGATAATGATGCCATA AAGTTATTACAAAAAAAGGGTATCATTTCTCCCACTTCTCTTGTTGGTTTGGATTCACTTAAGTTTTCTTGGTAGGGTCT TATTTCCCCATAGGAAAGCCAATAAAAACTTATCTAGACTCTTGTTTTCTCGGTCCATTTCAGATGAAAGTTTTCACAAT TCAGATTCGGCCGGCGTAAACTTCAATATTGTTAAGGAGGAATGTACGAAACGACATATCCCTTCAGCTTCATCAGCATT ATTTTTTGGTGGTATCCTAGGCATCATCCAAGCAGTATTACTTATATCTGCAGCAAAACCATTATTGAACTTCATGGGAG TAACTTCTGTAAGTACTTTTGTTGGCTGGTAGCACTTTGGCATTTATTTAGAACCTTATGCTATTGTCAAATAACATAAT TGTTTATACAGGACTCTCCTATGCTACACCCTGCACAGCGGTATCTAACATTGCGGTCCCTTGGCGCTCCTGCAGTTCTT CTCTCGTTGGCGATGCAGGGAGTCTTTAGAGGATTTAAAGACACTACAACTCCTTTATATGCAACAGGTGGCCTTGACAA ACTTAAATTGCTATTGATCTAGTGTCACAATGGTCCTGTTTGGATGTGTGGTCTTTGGAGCTTATCTACTAAAAAGCACT GAATAAGCTCAAATAAGTACTCTTTGATCTGCATCCAAACATGCTCTATATCTTGTTATCATCTGATTCTAATTACTATT TGTTTGATGTAATCTAGTTGCAGGAGATGTGACCAACATAGCACTGGATCCTCTATTCATGTTTGTGTTCCGAATGGGTG TCAGTGGCGCAGCCGTTGCCCATGTCATATCTCAGTATGTTTATTATTTCATTGTGAATTAAATGCTCTGATTATACTCT TGTTTAAGTACTGATCAGTCTGCCAATTACTGTATCTAGAACTATCTTGTCCTTTGTCTCTTCTTTCCCTGTTGCATCTT TTGACCTAATCTTCTTTTATTTTCAAATTGGTTGTAAATGTAGGTACCTAATTTCAGTTATACTCTTGTGGAAGTTGATG GAACAAGTTGATCTTATACCTCCAAGCATCAAACATTTGCAATTTGACCGATTTGTTAAAAATGGTATCGGTCTACTGTT CCTATAAAAATTTATTTATGCTTCTCTTTTCTCCTATTTCTTTCAAATTGATGCTTTTATTGATTGTTTCCCTTGGATAT AGGTCAACTAATATTTTAGCATTGACACTTGACACTATTATTGTTCTTTCCTGTTTAATTCTTGTCATTCAGGTTTTCTA TTATTAATGAGAGTCATTGCTGTTACATTCTGCGTGACACTGGCCGCATCCCTAGCTGCACGCCAGGGAGCAACATCGAT GGCTGCATTTCAAGTTTGTCTGCAGATTTGGTTGACAGTGTCTCTTCTTGCTGATGGTCTGGCTGTTGCTGGGCAGGTAA GATATGATTACACATTTACACTGTCCATTAAACACCTTGTTGTGTTGATTCATGATGGTTTCATATCAAAACATTGGATA ATTGTCAATTGTCTCTCTAAAGCACAATCTGGTTCTATGAGTTCATATGACTTGCAAAATAACACAATCTTGGTTTCAGG CTATTCTTGCTGGAGCATTTGCTAATAATGACTATGAAAAGGCCACGGAAACTGCATCCCGAGTGTTACAGGTGCTTAAG AATGTTAAAAGAAATCGTGTGTCCTTTTTCAAGACATTAAATTGTGAATGTGACGGATAATGATAATGCAGATGGGTGTG GTTCTAGGATTAGCACTTGCTTTCATTCTTGGAGCGGGATTGCACTTTGGAGCTAAACTATTTACAAAAGATGTTGATGT CCTCCACCTCATTAGAGTTGGGGTCCCGGTAATTTATTCATGTTCAAATTGAAAGTGATATTGGTAATCTATTCATTTCA ACCCCCCAAAGAGTGGAACTTATATTGATGTTAATGTTATTTTTTTTTTGTTACAGTTTGTTGCACTCACTCAACCCTTG AATGCTTTGGCTTTTGTATTTGATGGTGTCAACTTTGGAGCATCTGATTTTGCATATTCAGCCTTCTCCATGGTTTGTAT TTATCTTCAATGATTCATCTGCTATTATAAGTGCCATATTTTAAGCTATCCATGCCCCCACCCATTTTTTGTTCCTCTCT AATCTCACTCACGACTCGTCAAAAATTGTCAAGTCTGACCTCGACTAGAGATAACTAATGAAGTACTTATCAATGGGAGG AAAATGCTCACCCATTGCCTCTCAGCTAGATTTTTGGGTGTAGTTAGGCCCAATGCGAATTCTAATATGGTACTAGAGCC AATTCTCTAGGCTTGACGGGGTGTTAAGTCAACTTATAAATAAGAGGGAAATCCTCATTCCTGTGCTAGAACAATTTGCA AAAAGAGGATGCAGGAGGGTTAGAGCCAATCTAAATTTTATTTAATTCAATCATGGTATTCTTCATTCTCAGGGTGTGGT AGCAATTATCAGCATCATTTGTCTGCTTATTTTGTCTTCTGCTGGCGGTTTCATTGGAATTTGGGTTGCTTTGACCATCT ATATGAGTCTAAGGGCATTTGCTGGCTTCTTGAGGTAATGATTTTCTAATTTTTTTTTCCTGAAGTTTATCTTTGATACT TTTCTTTTCACTGTCAAGACAGTTGATACATCTATGAGGTCAAGACGGTAACTAATGAAAAATGTTGATGCAGGATTGGA ACAGGATCAGGACCATGGGAGTTTCTTAGGTGCTGA
CDS sequence (LotjaGi3g1v0287500.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAGAGAAAGAGAGTCTGTATTCATCAGGTGATTGGAGGAGAATATCAACTTGCACTTTCTTTAAGGATGCCAGGCT AGTTTTTAAATCAGATAGTCTTGGTCGCGAAATATTGTCCATTGCATTGCCTGCAGCAATGGCTTTGACAGCTGACCCTA TTGCTTCACTAGTTGACACCGCTTTCATTGGCCAAATAGGTCCAGTGGAGCTTGCTGCTGTAGGAGTTTCCATAGCTCTC TTCAATCAAGTATCAAGGATTGCGATATTCCCACTCGTCAGTGTGACAACCTCTTTTGTGGCTGAGGAAGATGCCCTCGG TGGAGCACACTCCCAGGAGGAGAGTAGAGAATTGGAAGCGGGTCTGAAAATGGATAATGATGCCATAAAGTTATTACAAA AAAAGGATTCGGCCGGCGTAAACTTCAATATTGTTAAGGAGGAATGTACGAAACGACATATCCCTTCAGCTTCATCAGCA TTATTTTTTGGTGGTATCCTAGGCATCATCCAAGCAGTATTACTTATATCTGCAGCAAAACCATTATTGAACTTCATGGG AGTAACTTCTGACTCTCCTATGCTACACCCTGCACAGCGGTATCTAACATTGCGGTCCCTTGGCGCTCCTGCAGTTCTTC TCTCGTTGGCGATGCAGGGAGTCTTTAGAGGATTTAAAGACACTACAACTCCTTTATATGCAACAGTTGCAGGAGATGTG ACCAACATAGCACTGGATCCTCTATTCATGTTTGTGTTCCGAATGGGTGTCAGTGGCGCAGCCGTTGCCCATGTCATATC TCAGTACCTAATTTCAGTTATACTCTTGTGGAAGTTGATGGAACAAGTTGATCTTATACCTCCAAGCATCAAACATTTGC AATTTGACCGATTTGTTAAAAATGGTTTTCTATTATTAATGAGAGTCATTGCTGTTACATTCTGCGTGACACTGGCCGCA TCCCTAGCTGCACGCCAGGGAGCAACATCGATGGCTGCATTTCAAGTTTGTCTGCAGATTTGGTTGACAGTGTCTCTTCT TGCTGATGGTCTGGCTGTTGCTGGGCAGGCTATTCTTGCTGGAGCATTTGCTAATAATGACTATGAAAAGGCCACGGAAA CTGCATCCCGAGTGTTACAGATGGGTGTGGTTCTAGGATTAGCACTTGCTTTCATTCTTGGAGCGGGATTGCACTTTGGA GCTAAACTATTTACAAAAGATGTTGATGTCCTCCACCTCATTAGAGTTGGGGTCCCGTTTGTTGCACTCACTCAACCCTT GAATGCTTTGGCTTTTGTATTTGATGGTGTCAACTTTGGAGCATCTGATTTTGCATATTCAGCCTTCTCCATGGGTGTGG TAGCAATTATCAGCATCATTTGTCTGCTTATTTTGTCTTCTGCTGGCGGTTTCATTGGAATTTGGGTTGCTTTGACCATC TATATGAGTCTAAGGGCATTTGCTGGCTTCTTGAGGATTGGAACAGGATCAGGACCATGGGAGTTTCTTAGGTGCTGA
Protein sequence (LotjaGi3g1v0287500.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAEKESLYSSGDWRRISTCTFFKDARLVFKSDSLGREILSIALPAAMALTADPIASLVDTAFIGQIGPVELAAVGVSIAL FNQVSRIAIFPLVSVTTSFVAEEDALGGAHSQEESRELEAGLKMDNDAIKLLQKKDSAGVNFNIVKEECTKRHIPSASSA LFFGGILGIIQAVLLISAAKPLLNFMGVTSDSPMLHPAQRYLTLRSLGAPAVLLSLAMQGVFRGFKDTTTPLYATVAGDV TNIALDPLFMFVFRMGVSGAAVAHVISQYLISVILLWKLMEQVDLIPPSIKHLQFDRFVKNGFLLLMRVIAVTFCVTLAA SLAARQGATSMAAFQVCLQIWLTVSLLADGLAVAGQAILAGAFANNDYEKATETASRVLQMGVVLGLALAFILGAGLHFG AKLFTKDVDVLHLIRVGVPFVALTQPLNALAFVFDGVNFGASDFAYSAFSMGVVAIISIICLLILSSAGGFIGIWVALTI YMSLRAFAGFLRIGTGSGPWEFLRC
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 159 | 159 | - | – | |
| PANTHER | 17 | 504 | 488 | 1.2E-249 | – | |
| PANTHER | 17 | 504 | 488 | 1.2E-249 | – | |
| CDD | 34 | 495 | 462 | 3.13222E-112 | – | |
| TIGRFAM | 44 | 475 | 432 | 3.2E-132 | ||
| Pfam | 157 | 248 | 92 | 7.7E-12 | ||
| Phobius | 160 | 182 | 23 | - | – | |
| TMHMM | 161 | 183 | 23 | - | – | |
| Phobius | 183 | 201 | 19 | - | – | |
| Phobius | 202 | 222 | 21 | - | – | |
| TMHMM | 203 | 225 | 23 | - | – | |
| Phobius | 223 | 250 | 28 | - | – | |
| Phobius | 251 | 277 | 27 | - | – | |
| TMHMM | 255 | 277 | 23 | - | – | |
| Phobius | 278 | 302 | 25 | - | – | |
| TMHMM | 302 | 324 | 23 | - | – | |
| Phobius | 303 | 324 | 22 | - | – | |
| Pfam | 307 | 460 | 154 | 1.8E-13 | ||
| Phobius | 325 | 335 | 11 | - | – | |
| Phobius | 336 | 359 | 24 | - | – | |
| TMHMM | 336 | 358 | 23 | - | – | |
| Phobius | 360 | 378 | 19 | - | – | |
| TMHMM | 378 | 400 | 23 | - | – | |
| Phobius | 379 | 401 | 23 | - | – | |
| Phobius | 402 | 412 | 11 | - | – | |
| TMHMM | 412 | 434 | 23 | - | – | |
| Phobius | 413 | 434 | 22 | - | – | |
| Phobius | 435 | 445 | 11 | - | – | |
| TMHMM | 444 | 466 | 23 | - | – | |
| Phobius | 446 | 465 | 20 | - | – | |
| Phobius | 466 | 471 | 6 | - | – | |
| TMHMM | 471 | 493 | 23 | - | – | |
| Phobius | 472 | 493 | 22 | - | – | |
| Phobius | 494 | 505 | 12 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Antiporter activity | Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy. The reaction is: solute A(out) + solute B(in) = solute A(in) + solute B(out). | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Xenobiotic transmembrane transporter activity | Enables the directed movement of a xenobiotic, a compound foreign to living organisms, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi3g1v0287500.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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