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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0288400 |
| Transcript ID | LotjaGi3g1v0288400.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Outer envelope protein 80, chloroplastic; TAIR: AT5G19620.1 outer envelope protein of 80 kDa; Swiss-Prot: sp|Q9C5J8|OEP80_ARATH Outer envelope protein 80, chloroplastic; TrEMBL-Plants: tr|I3SNW6|I3SNW6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0288400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:58499421..58507099) extracted from Lotus japonicus Gifu genome v1.2.
ATCGTTTCTTCTTCCATTAAAATCCCTCTTCTTCCAAAACCCTCTCATTCTCACTCTCACTCTCCTCTCGCAACCGCGCG TTCTCACATCGCAAACGCCGCCAACTCAATCACGCAACTCATTCACTCGTTCACGGCTCACTCCACCGAGTTAACTCGGA CCGCGCTGCGAAAACCGTTGCCGTCGCCGTCGTCGCTCCTGTGCTCGGCGACGTTGTCGCTCACCGATGAGAGGAAAGGA GGAGGAGCTTCTTCGTCGCCGATTCTGTGTTCGGCGTCGTTGTCTCTGGCGGAGGAGTCTCAGCAGAAGGCTCGACAGAG CGAGGAGCGAGTGCTCATCAGCGAGGTTCTTGTTCGGAACAAGGATGGTGAAGAACTCGAAAGGAAGGATCTCGAGGCGG AGGCTGCGCAGGCTCTCAAGGCTTGTCGACCTAACTCGGCTCTCACAGTGCGCGAGGTGCAAGACGATGTGCACCGCATC ATCAATAGCGGTTACTTCTGCTCCTGCGTGCCGGTTGCTGTTGATACGCGTGATGGTATTCGATTGATATTTCAGGTATA TTCTGTTCGATAGATATTGAACGATGCTGAATTGAACACTAGCTAACTGTGATAGTTAATCTTTGAAATTTTGATTATAC TTTTATCATGCTTTTTAAGTAGAATTTCTCATTCTAGTGTTGCATGTTCAAGTCTGCATTGAGTTAGGGTTGACAGTGTT ATGGAATATTGAATGCTGTTGTGATAGTACTGGTTTCTTGTGGCATAAGGTAGAACCAAATCAAGAGTTCCAAGGATTGG TATGCGAAGGAGCGAATGTTCTTCCGGCTAAGGTTTTAGAGAATTCTTTTGGAGATGGATATGGTAACTCATTCCTCCTT GTTCTTATCTGTGCAATGTTGTGATCATGAAAATGATGATATTCGTGTATGACCTTCGCTGTATTCTTATTTATATGTTA AGTTGTGCAGGGAAAGTTATCAATTTGAAGCGCTTGGATGAAGCAATATCTTCCATTAATGGCTGGTACATGGAACGAGG TCTTTTCGCCATGGTTAATCCCCCTTAACTTCTGTTTTGATTTAAAAAATCTTGTAAACATATTCCTGCTTGGATATCAC TCATATTTTTGGTAGCCTTAGCGCCATAAAGTATCATTCTATTATTTCTTTCATCTTTACTTGTCTTATGCTCAAATCAA TATTCCAATTGAAATTGTCTCCCCCCCCCCCCTCTTTGTTTACCTGCCTTCTAGGTTTCAGCTGTTGAGATTCTCTCTGG AGGTATTTTGAGATTACAAGTTTCAGAGGCTGAGGTCAATAATATTTCCATTCGGTTTCTGGATAGGAAGACGTAAGATT TTCTTTCAATTTGATCTACACAAAGAAATACACTTGATTTTATGTTATATAATTTCACGAAGAGGTTTCCGATACTAACC TGATTTTATATCTGTAGTGGTGAGACTACTGTAGGGAAGACAAAACCTGAAACAATACTTCGGCAAATTACAACGAAGAA GGGACAGGTAACTCCTTGACCTAGCACTGGGTACTCCAACAGATGATGGTTCATGGTTTCTTGTTAGCTAGCTTTTTTCA TAAGTTTTATCATGAACTAGTGTGCATTTCATTTTTGTTGAAAACCGTGAATTGAATTAATACAAGAGAATTTTATATAC CTTTTATATACTAGTCTAATTTAAGTTTCAAAGCTGATTGAGTGATTGTGGTATTATTTTATCAAATTTGGTTGTGAACA TTCTAAGGTCTGGTCTGTGGCATCTGGGATATCTGTATATGTTCAGTTGTTCACTGAAGGGGTCGTTTCAGATTTATCCT AATTTGATCTTTTAGAAAACATTCCTTCTTGAATTTGCACATCTTCTCAGACGGGTTTTGGCATCATCCATAATTGTATT TCCAGGTTTACAGCATGCTTCAGGGGAAAAGGGATGTTGAAACTGTATTAACTATGGGGATCATGGAAGATGTTAGTATT ATTCCCCAACCAGCAGGTAATGACCATTTTTCGCAAAATTAGCTGAAAGCTTGCTTCTAGCTGAGAGCCATTTAGTTAGC AAATTGAAGTGTTTAGGAAGTTGTTGAACTAGCTGCAAAAGTAAAATTACAGAATAAGACATATTTATATGGTTTTTGAT TATTTAGCATTACTTTATTTACATTTAAATTTTTATATAATATTTATTTGAAATAATTATTTGTATTACATGTTATAATT TATTACAAATGATTTATCTTCTTAAAATTTAATACTATTTTTTTATATTTTTATTAAATGAAATGAGATAATATAGATGA AGTTAGATTATAATTTAATTAACTAAACTAATATTTCTTTAAGATTAATAAAGTACTTTTAAACTTTGTATGAAACATAA AATAATAGTCATTTTGAATCAAAAGAGTTTTGTAGGATAATTTTGAATCAAAAATTTAATTAAAGTAGTAGGGGTAAAAA TTAGAATAAAAGCAATAAGCTATAGGCTATAATATGAGTTCAAATGCAACTTGCAATAGTGTTTCAAAATATGCTACAAT CTAGTGAGATAAGCATGGTTACCAATCACTTCTATTTTGGTCAAACAAGGTTATAAGCTAGTTAAATAAGCTTTAAACTA GAATAAAATCAATAATAAGCATAGGCTCTAATATAAGTTCACATGCAACTTGAAGCAGCGTTTCAAAATACCCTACAAGC TAGTGAGATAAACTTGGGTACCCAACACTTCTATTTTGGTCAAACAAAATTATAAGCTATAGGCTATAATATGAGTTCAA GTGCAGCTTGAAGTAGCGTTTCACAAAACGCTGCAAGCTAGTGAGATTAGCTTGGTTTCCAAACACTTCTATTTTGGTCA AACAAGCTTATAAGCTTAGTCAAATAAGCTTTGAGCTTGAATATAAACAATAAGCTATAGGCTATAATATGAGTTCAAGT GCAGCTTGAAGTAGCGTTTCAAAATACGCTACAAGCTAGTGAGATTTGCTTGGTTGCCAAACACTTCTATTTTGGTCAAA CAAGCTTATAAGCTAGTCATATAAGTTTTAAGCTAGCTGAAATATATCGTCAAACTCACTCAATGAATACATACTAAAAT GGGCTTTAATTTAAGGCAAGCAACTGTAGGAAAGAAAAATGGCAAGTTTTCAGTGCTAAGTAGTAACTGCACTTGCGAAC TTGTAATGTAATTTCTTACACGGCCATATATAAGTATACCCTTTTTTATTCAGCGTTTTAGTATCCTACCTTGAGCTACT TCGTATAATTGTTATAAAAAAAGGAGATAGTATTTCGTACTAACTTGGGGAGGAACTAGGAAACTTAAGTTAATGGAAAC ACTAGAAAGCCAAAAAGGAAGAAAAGAAAAGAGAAATGGGATATTTCAAAATATAATGGGCTATTTGGATTGAGAAAACA TCTATTGTATTCATTTCTTTTAAACTTTTCAATTTGAAATTGCCACTTTGTTTATTGTTTTCAAATATTTTTACAAGAGA AATTTTTTTCTCATTATTTTCTAAAAAAATATTTGAAAACATAAATTAAAGTCGGATTTTGATATTTAAAAGTGGAAATA GGAAATACAAACAGAAAATGTTTTCTCAAACCACTGGAAGTCTAAATAGTTTCTATTGCTGAAGAGGAATATGTTGTAGT GTTCTTAAGTGGCCAAATTCTTTTCTCAGTAATTCACTGTTCGGATTTTGTTAGCTTGTCATGATACCTCACTGCACCTC AACTCATTCTGTCTGAAGGGAAATACATTCTTAAAACGCAAGATTTTCATTTTTCTTTTCTTGTCTTCCCCAACTAGATT CATAGTATTCTCTGAAGTCTACACTACTGAATTTTGTTTCTTGCCATGGTATAGATGCGGGGAAGGTTGATTTGGTGATG AATGTGGTGGAACGTCCTAGTGGAGGGTTTTCTGCTGGTGGTGGTATATCAAGTGGGTGAGTATTGCTAGGCTAAAGCAT AAAACAACTTAATTTACTTATTACGTAATAAGTGTCATGTTGAGACTTATGAAATTTACTACCGTCCCTAGTAATTTTGT AAGTTACTGTAAAGTAAAATCCTGTACTTTGAATTTCCACAAGACAAATATCCCCTTCATTGAGCTTTTCATACTACTCC ATATGCTAAATGCACTTTACTTAAACTATTCGGCAGATTAGCATAATTTTCCCCTATCATTTGCTGCATAGTCTGACTAG TTGCTTACATTCGCAGGATTACAAGTGGTCCACTGAGAGGACTCATTGGAAGGTTAGCTTATTTTCTAGTCTTGTGGGTG TTAAACTGTTAATGCTTTGTCTTCAGGCATCCTACCCTCTCCATTTAATAGCAAAGGTTTCTTCCATTCAATTAAATCCA TTTCAAGGGTCATTTACCGCTGCTGATGGCTCCATATACTACTATGGAGTGTTGATGCTAATGGTAAATATGTCCTTTGT AGCTAGCTGTAAGCAGACTACCTCCTGCATATAATTATGCAGATGATAGAACTGAATCATTTTGAAAATACGGTTGATAT TAACTTGTCCTGATAGCCTATCAGTTTATCTATGCCTGTGTATTTTTCCTATTATCAGTAAAACAGAATAAAGTTCTTTT TCCTTTGACATATGTTCTCATATTGCATGTTGCTTATGGTCCAATTGCAACTGGTTTACTCATCACTGATCCACACAAGT CTATTTTAATTTCATTGCAGCTTCGCATATTCTCATAGGAATGTTTTTGGGAGAAACCAGAAACTCAATATTTCCTTAGA GAGGGGTCAGATTGACTCAATCTTTCGCATTAACTACACAGACCCTTGGATTCAAGGAGATGATAAACGAACATCTAGAA CAATAATGATCCAGGTAATCTCTGAAGGTTTAATTGTGCGATCTCAATAACTGTACTGTTGATGATAGAAAGTTAAAGAT TGTGTATGCTGATATTTAATTAACTTCTTTTTAGAATTCAAGAACGCCTGGAACAATTGTTCATGGTAACGTGGATGGTA ACAGTAGCCTGACCATTGGCCGCATCACAGGTGGTATGGAATTCAGTCGACCAATCAGGCCAAAGTGGAGTGGAACAGCA GGACTTATTTTCCAGGTGCTTCATTAACAGTTCTGGTCAATGTTTTCGTGTGTTGTAATTTGTAATATATTTTTCTTAAT ATTCTGGTTTCAGTCATTCCACTCTAGCTATATCAATATCACTTGTGAATTGCTGATTTGCTTAGTTTAGTTAAACCATG TAATCACTACTCAGTTTGTTGCTGCCTTAAATGTAATTATAATAGTCTGTATGCCTAGTTATGTCACTGATTCTTTTATT TCATTCTTTTCAAATTATCTCTATTATTTCAGCGTGCCGGAGTCCGTGATGACAAAGGTGATCCTATCATTAAGGATTGT TACAGCAGTCCACTTACTGCAAGGTTATAATCGAAAAATGCTACATGTTACTTGTTTTGGACTTCATCTGATTCTTTCTA ACCTTTTTCAAATTTTCCTTGTAGTGGCAATACCCACGACGATACGTTGCTTGCTAAAATCGAAACTGTTTACACTGGTT CTGGTGACCATGGATCTTCTATGGTTCGATATGATTTGAATGCAGTTCTTCAGTTTGAATGTAATTCTATGTTTCTTATC ATTACATGCTTGGTTTTGCAGTTTGTCCTCAACGTGGAACAGGGGCTTCCTCTTTTGTCTGAATGGCTGTCCTTCACGAG GGTGAATACACGGGCTAGGAAGGGTGTTGAGATAGGTCCTGCTCGTATTCTTTTGAGGTATGAAATACATGTTGTCAACG CCTTCTCATGAAAAGGAAAAGGAATACATTGTTATTTACACATTAAAGCAAAACAAACAATCTTATATTTTACTAACTTT AATTGGTTCACTGCTAGTCTATCTGGTGGTCATGTGAAGGGAAATTTCTCTCCCTATGAAGCTTTTGCCATTGGTGGAAC AAACAGTGTCAGAGGCTATGAAGAAGGTGGTGTGGGATCTGGTCGATCATATGTGGTTGGCTCTGGAGAAATTTCTTTTC CCATGGTACTTGAGTTTTATCAAGCCTTTTCCTGCTCAATCAGTTACAACCTGGCTGTATTTTTTGTTTTTGTTTCTGAG TCGTGCGATATCTTAGAGCTGTAGAGTGAAATGTTTTTGGAATATAGAGTAGAAGATCGCTTGTAAAATATTGGAAATAG ATTTTATAAATCTGATGTGTTAAACATAAGTATAAACTGAGAAGAACAAAGATATGTTCTAGTCTGAAGAAAGGGTAAAA TGCTTAACTGGAGTAAATAAAATCTAATGAAAATTTATAAAGGAACTCTCAAGTTTCTGCTAAGTTGCATATAATGACTT TCTTCATTGAAGATGGCAATATGTCGCAATTCAGAATTTAAACTTTTCTGTTTCTTTTTCTGACCTGACCTTACTACCTC CCATGAATTTCCCAAAAGTATTGTACTGTTTCAATCCGACACAAACCCAAGAACAAGAAGAGAAATTAACATAGAATCAA CATGGTTCAATCTACAATAAACCTTCCACAGAAAATTTTCTACGATCAATAAATATTTCAAGGAATAGCTGCTCAACACT CAAACCCTAGTCAGCAAAACCCAATTCAACAGATGTTCACTGTAAAAGATTAAAGACACTATGAACAAACTACTAAGTTA GCAAGATTTATGTGTATTTTGTCTGTAGTCCCTCTCCCAAGAATAAAATCCTTATTAGGTCACCCAACATATGTTGGGTC AGGTATTGCCCTCCACTGATACACAGCCACTTATAACAGTAGTGATGGCAGGTGTCTTATCAAAGAATATAATACTACTA CAATTTTATGAAACAGAATGTGCATGTAGTAATGTAATATGTAATATTTTGAAGTACTATAATAACTTTTGTTGCATATA TCCGTGCCCCCAGGTGCATGCATTTGACTAAATATAAGTTATAACAGGGTCAGGTGCATCAAGCATGCGTATTGATCTTA CTTTTTTATGTTTGCAGTTTGGGCCAGTTGAAGGTGTTGTGTTTTCTGACTATGGAACTGATCTTGGGTCAGGTCCAACT GTCCCTGGTAGGTCTTCTTCATTTGGATTTTTCAATTTCTTCTTTTTTATTTGGTTGTTTTTTTCTGTATTTCACGAAGA TGAGTAATATTTCGGAGATCACATAATGCACATGAATGCTATCATAGAAGTGATACTGATCTTAATTAAAAGAGTGAACT TGTCCTATGTTATGCAAGTTTTTTTTGCTGCTAAAAGGACTACAATCATAGAGTAATTATTTTTACTTAGCAGAACCAAC TTTTCTAGGCCTATCTTTGTTATTTGGCTCCACAATCTTTTTTCTAAACTTTTTTACTTCTCAACTTCCATCCCAACTAT TAGTGCTCTAGATTTTTGCCAATATTGCTCATGCTGTCCTTATTGAGAGCACATATTAAATGGTGTTTTGTGTTTTTGTT TCAGGTGACCCTGCTGGAGCAAGGGGGAAGCCTGGAAGTGGACACGGGTATGGGTTCGGCATCCGCGTGGATTCGCCTCT AGGTCCTTTGCGTCTTGAATATGCCTTTAATGACCAGAAAGACAAGAGGTTCCACTTTGGAGTTGGCCATAGAAACTAA
CDS sequence (LotjaGi3g1v0288400.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAATGTGGTGGAACGTCCTAGTGGAGGGTTTTCTGCTGGTGGTGGTATATCAAGTGGGATTACAAGTGGTCCACTGAG AGGACTCATTGGAAGCTTCGCATATTCTCATAGGAATGTTTTTGGGAGAAACCAGAAACTCAATATTTCCTTAGAGAGGG GTCAGATTGACTCAATCTTTCGCATTAACTACACAGACCCTTGGATTCAAGGAGATGATAAACGAACATCTAGAACAATA ATGATCCAGAATTCAAGAACGCCTGGAACAATTGTTCATGGTAACGTGGATGGTAACAGTAGCCTGACCATTGGCCGCAT CACAGGTGGTATGGAATTCAGTCGACCAATCAGGCCAAAGTGGAGTGGAACAGCAGGACTTATTTTCCAGCGTGCCGGAG TCCGTGATGACAAAGGTGATCCTATCATTAAGGATTGTTACAGCAGTCCACTTACTGCAAGTGGCAATACCCACGACGAT ACGTTGCTTGCTAAAATCGAAACTGTTTACACTGGTTCTGGTGACCATGGATCTTCTATGTTTGTCCTCAACGTGGAACA GGGGCTTCCTCTTTTGTCTGAATGGCTGTCCTTCACGAGGGTGAATACACGGGCTAGGAAGGGTGTTGAGATAGGTCCTG CTCGTATTCTTTTGAGTCTATCTGGTGGTCATGTGAAGGGAAATTTCTCTCCCTATGAAGCTTTTGCCATTGGTGGAACA AACAGTGTCAGAGGCTATGAAGAAGGTGGTGTGGGATCTGGTCGATCATATGTGGTTGGCTCTGGAGAAATTTCTTTTCC CATGTTTGGGCCAGTTGAAGGTGTTGTGTTTTCTGACTATGGAACTGATCTTGGGTCAGGTCCAACTGTCCCTGGTGACC CTGCTGGAGCAAGGGGGAAGCCTGGAAGTGGACACGGGTATGGGTTCGGCATCCGCGTGGATTCGCCTCTAGGTCCTTTG CGTCTTGAATATGCCTTTAATGACCAGAAAGACAAGAGGTTCCACTTTGGAGTTGGCCATAGAAACTAA
Protein sequence (LotjaGi3g1v0288400.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNVVERPSGGFSAGGGISSGITSGPLRGLIGSFAYSHRNVFGRNQKLNISLERGQIDSIFRINYTDPWIQGDDKRTSRTI MIQNSRTPGTIVHGNVDGNSSLTIGRITGGMEFSRPIRPKWSGTAGLIFQRAGVRDDKGDPIIKDCYSSPLTASGNTHDD TLLAKIETVYTGSGDHGSSMFVLNVEQGLPLLSEWLSFTRVNTRARKGVEIGPARILLSLSGGHVKGNFSPYEAFAIGGT NSVRGYEEGGVGSGRSYVVGSGEISFPMFGPVEGVVFSDYGTDLGSGPTVPGDPAGARGKPGSGHGYGFGIRVDSPLGPL RLEYAFNDQKDKRFHFGVGHRN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 340 | 340 | 3.4E-205 | – | |
| PANTHER | 1 | 340 | 340 | 3.4E-205 | ||
| Gene3D | 8 | 341 | 334 | 1.0E-31 | – | |
| Pfam | 39 | 341 | 303 | 1.1E-51 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Outer membrane | The external membrane of Gram-negative bacteria or certain organelles such as mitochondria and chloroplasts; freely permeable to most ions and metabolites. |
Expression pattern of LotjaGi3g1v0288400.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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