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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0288600 |
| Transcript ID | LotjaGi3g1v0288600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Zinc transporter; TAIR: AT3G20870.1 ZIP metal ion transporter family; Swiss-Prot: sp|Q940Q3|ZTP29_ARATH Zinc transporter ZTP29; TrEMBL-Plants: tr|I3SZK7|I3SZK7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0288600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:58526380..58531338) extracted from Lotus japonicus Gifu genome v1.2.
AAGGAAGCAGAGCTACATCAAAAAAATGTATAATGTAGTGGAAAAATAACAAATGATATTAATTAATTAATTAATAAAAT GAGTCATACCTGCTCCCTGATTGTTGGGTAAGTACAAAGCAGAGTGAGTCTAGTAGTAGTGCCTGCACTTCTCTTCTCTT CTCTTCTCTGCTATCTAACTATCTTCTATCAACAGCTTCTCTTCTTCTTCTTCTTCTTCTCCAAATCCAACCGAACCCTA ACACCACCGCTCCACGCCGTTGAGCCATGGATTCTCCGGTGACGGTAGCTCTTGCTCTCTCACTTGTTGGTGGATTCAGT ACTTCCATCGGTCCGTACCTCTCTCTCTCTGCAACCTCCATTTCAATTACACAACTTTAATGTCGTTTCGTTTGTTTTTA GTATCTTCAATTTCCAATTCCGATTTTCACTCTATGCTGCTCTTCTGGTTGAAATTAGTTGATAATTTGATATCTTAGTT TGTTCCCCCAGAATCTTAACATTAGAGTTTCATTTTCAATTCCAATATTTCCATTGAGTTTCTATTGTTAATGTGAAACA GGTGCACTTTTTGTGATTGTTAATCCAGCTCCCAATTTGAAGATGCTTGGTCTATTACAGGTGCTGCTTTTCTTCAATTC TGATGAGAATGCATTGTGTCCCTTTATTTTTTTGTCAAATGTGATAAAGTTTATTTGATTTGTTTCATTCCGTGAAGGGT TTTGCTGCTGGTTTGATGCTGAGCATATCGTTCTTCGATCTCGCTCACAATGCTTTAAACTCACTGGGCTTCTTGAAGGG AAACCTTTGGGTATGCTCTTCACTTCACCAATCATTAAGTCATTTTAAAGTTTTCTTTCTCATGTTAGCGTTGATCATAA TGTTATGTGTTCTCTTTGATACAGTTTTTTGCTGGTGTACTATTCTTTGGTGTTATTGCCAGTTTCATCCCAGAGCCATC ACTTGCTCCCACTTCGAATACGAAAAGTAGAAAGGTTTTAACTTTTAACAAACTTGTTTGTTACAAATAACTGTTACTGC CTTCTTCTTGCATTTGCAAAGTGGCGTTGCAGCAGCTATGTTGTTTACTGCATAAATATAAAATTTTGATAGATGACATA CTTGAATTAGAAAAATGGGGATGAAGAAAGCAAGGATGGTATGAAAAAGCATCGGAGGCAAGTTTTATTCAGTGGAATTG TTACAGCTGTAGGTATGACTATCTTGGTAATTTTAACCTAGCATTTTTCTTAAAATGTTCTTCTTTTTCGTGCAAAAGAT TATATGAATACTTGACGAATATGAAAGATATTTTTCTTGAGTTTTCTAGGAATTTGGGCCTATTCAATTATTAAATTTTC CTAGTTAATGAAAGACTTGATCAAAAGGGGCTGTTTGTTTTCATTTCCTAATTTTACTTTTGATTACCAAAATGCCGCCT GATTTTTACTTTGCTTTCTAATTTTAAAATTCAAAGTAGTTTTTTCACCAATTCATGTACAAACTTTGGAATCAGAAATG CAAAGTGAAAGCAATGTGGAATTTTTGTAATTAAACGTGAAAATAGGAAATCATAATAGAAATTTTTTTTCTGAAACCAA AAGGGACCCTAAGAACTTATTTTTCATTTTCCATTATTCCTGTAGTGTATTATTTCTTTTATTTTATTGATATAGTTTTC TTCTCTGTTCCTATCCTAGGTATAAGTTTACACAATTTTCCAGAAGGAATGGCAGTATTCCTTGGGTCCATGAAGGTACC CAAGAACTTACTGTGTGCATATGGATCTTTGACTTCTATAATTAGTTGTTGAAGGATTGCTCCACATTGCTATCATTATG CTTGTTAATAAACTTCAATTTGATACTTGTGAAATGCTTTTTTCAATAGGGCCTCCGCGTTGGCCTCAACCTAGCATTGG CCATAGCTCTGCACAATATCCCTGAGGTATAAATTTTCATCCTGTGGTGGAACTTGTTTACTCTAGATATATTCGTTATA TTTGAATGGTGCTACTGCTACCAATGTTGAAGGAAAACTGCTGTTCTTTATAGTCCTTGATTATATATTGTCCTTATATT TTATTCAACTTTTATTGTACTATATTTTTAGTTTCATATAGAACAAAGTTTTCCCTACGCATGGTTGTTCTGAAAAAACA TTTCTTGAAATGCTTTATGGGCCTTATTGTAATTTTAACAATCTTCTTCTTTCTAGGGTGTTGCTGTTGCACTTCCTGTT TATTTTGCGACAGAAAGGTAATAAAGGTTTCCTGTGGTAGCACTTCAAATTTAAAAGTAGCTTTTATAGCTATTCAAGTG CAAAGGAGTTATGGCCAATTGACATGTGGCCTGAAATATGCATATGGAATAGTGAACTCAAGAATGATATATGAGAAATA AATAGGGTGATTATGTGAATGTGCTGTGACATTGCAAATGTTATCTAAAATTCTAAATTGATTGTGCTGTAAAGGATTGC TGATGCATATGTTACCATTTTATTTTTTTCTTTTTCAATTTATGGTTAGTAGTGGTAGTATCATGGGATGGTGGCAGTGG AGAAAATAGCTTGGTTGGTCCGTGTTGATGGTGGCTACGCGAGACAAAACCTTTCTATTTATGGCCATTATGCTTCTGTT TCACAGTGGAGGTTATTTTTTCAGTTTTGCTTCAACACAAAAAAAAAAATTAAACACAATAGAACAGAAATGTGAGCCTG TATTTGGATTTTAATGCCACTGCCTATAAAAATCAAAATACATGCTCATAAGTGCAATGATGCTCGCATTTACAAATTTT GACATACTTAGTATCATTTGTTTGGTGTATAATAACTCCTGGAATCTCTAACTAGTCTTAAATCTGGGTTTTTATTGCTA TGTTAAAGATAGGTTATGTCAATAACTATGTCTTTGAATTATAACTGTTATTTTTATTTATATAATTTGTTTCTGGATGT GTCTTAGTAAATGGCAGGCATTCAAATTGGCATCACTTTCTGGCTTTGCCGAACCTCTGGGTGTCATAATTGTAGGTATA TCATCTGCTTTATGTTGCTTTGCTAAATAGAATCTGCTTTAGTTTTCATGAAGTAGAAAGCAAGTTAGCTGTAATGTCAA AGTTAGGTGAGGTATGCATGCGCATATGTGTGGGTAGTGGGTACTTAGTTGAACTTAATTTGATGATTTCTTTTATTTCA CTGTAGCTTATCTATTCCCGAGCAGCTTAAATCCTGAGATTCTGGAAGGTTTACTTGGATCAGGTTTGCCATAATCCAGC TTCTAAATGTCACAATTGGATCTTTGGCATTTATGTTCATTATGCAGATTTGTTCTGTGTTTATTACAGTTGGGGGAGTT ATGGCTTTTCTCACTCTTCATGAAATGCTGCCCTTGGCTTTCGATTACGCGGGACAAAAGCAATCTGTTAAGGCTGTCTT TCTTGGGATGGCTTTCATGTCCGCAAGGTGATAATCCCATTGCTCATGAAATAGTATTTCAAGACCTAATGTTATTGTAT GCTTTCAACTGTTACTTTTGTAAAATATTTATTGCATTTAGGTGTCCTATTTCATGTCTCTATTTGTTTGAGTGAATAAA TAAGTCTCTATTTTCTTGAGCATGTTAACTAGAAACTAGTAACAATGAATATTGCTTGCTGCAAGGCGAGGAAACTTTTA TTGTGGATGCAGAAAGTACAAACAGTTCGACTCGCAGCAATTTAGTAACTCCTTGTGAAGTTTCTTTCTTTCTTATGTCT ACAATTTGTGCAAACTCTTTATTGGGTCTGTCTATCAGATTGTGACCTAATAACTTTTTCTTTTGTTGAGGAGGGGGGTC GCTGTCAGTCAGTATACTTTTCAAAAGAGTAAGACTACATAGCACAAAAGAAAATTAGCCAAGTTCAGCCAGAATTTGCT ATGATTGGAGGTGGTAGTTGTTGGATAATGCAATGTGGTGGTGAAAATTATATATGAATTTCAGCAAGTTATCAAATTCA GATTCGAATTGTGAAATGGAAGACCTATTTTCCGAATCATAAATTGAATCTTGTAATGAATAGTTAGAAACATGGCCAGT AATTAAAACTAACTATATTTTCACATCAACCTGAGTATCTGGGGAATGTGTGAAAATTTGCTTTTCCCCCCGATTTTAAA GGGACATCAACCTGAGTATCTGGGGTGTTTCACTATGCACCTGTCATGTTGTATCACAATATGTCTTTCTGTCTCTTTTT TGCTAGTAAGTTGTTATCTCATTTTATGTTGTTTGATGTGCAGCCTGTATTTTCTAAGTATCTGCTTGCCAGAGGATCTA AGCTTGTAGATGGGATTAACCTCTTCTTTTCTGAATGTCATGAATTCCACAGTATCACTGTGGTGTGGTGTGGTGTGTCT TCTGATGGTATAACCAGTTAGTTGCAGTGGAATTCCTTCAGAAGGAGCCTTTCAAACAGATCAATGATAATAATGTACAG CCATCAGACATCAATATAGAGGAATACATTGCACCTATGATTAGGGTTTTCCCTATTGACGAATGTACACAACAATTTAG AGAGAATAAGAGTATGCTGATTCTTAATTCGACCACTGGCCTTGTATTATATCATCTCAGAGATCTTATGTTTTCATTTG TCTGTCCCCCACCAATCAAATTGTGTAATGTGTACGGTAGCGTTTGGTAAACAGGTGGGAAGGGAACGGAACGGGACACA TGGGTTCCGTTCTGTGTTTGTCATGTTTTCAAGATGGAACGGAACGGGACAAAGGCCTCCACGAACAGGACATTTTGGTT TCCTGGAAAATGGTGGAACGAAAGGGAACGTAACGGAACACTCTCTTAAAACTTTTGCAAGTTCAAAAATTCTCCTAATT TATATTTGAAATTTTATGTATCTAAACAGTTTAAAATCACTTCTAAAATTAAAAGCACTTATTATAATTGTAGACAAAG
CDS sequence (LotjaGi3g1v0288600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATTCTCCGGTGACGGTAGCTCTTGCTCTCTCACTTGTTGGTGGATTCAGTACTTCCATCGGTGCACTTTTTGTGAT TGTTAATCCAGCTCCCAATTTGAAGATGCTTGGTCTATTACAGGGTTTTGCTGCTGGTTTGATGCTGAGCATATCGTTCT TCGATCTCGCTCACAATGCTTTAAACTCACTGGGCTTCTTGAAGGGAAACCTTTGGTTTTTTGCTGGTGTACTATTCTTT GGTGTTATTGCCAGTTTCATCCCAGAGCCATCACTTGCTCCCACTTCGAATACGAAAAGTAGAAAGAAAAATGGGGATGA AGAAAGCAAGGATGGTATGAAAAAGCATCGGAGGCAAGTTTTATTCAGTGGAATTGTTACAGCTGTAGGTATAAGTTTAC ACAATTTTCCAGAAGGAATGGCAGTATTCCTTGGGTCCATGAAGGGCCTCCGCGTTGGCCTCAACCTAGCATTGGCCATA GCTCTGCACAATATCCCTGAGGGTGTTGCTGTTGCACTTCCTGTTTATTTTGCGACAGAAAGTAAATGGCAGGCATTCAA ATTGGCATCACTTTCTGGCTTTGCCGAACCTCTGGGTGTCATAATTGTAGCTTATCTATTCCCGAGCAGCTTAAATCCTG AGATTCTGGAAGGTTTACTTGGATCAGTTGGGGGAGTTATGGCTTTTCTCACTCTTCATGAAATGCTGCCCTTGGCTTTC GATTACGCGGGACAAAAGCAATCTGTTAAGGCTGTCTTTCTTGGGATGGCTTTCATGTCCGCAAGCCTGTATTTTCTAAG TATCTGCTTGCCAGAGGATCTAAGCTTGTAG
Protein sequence (LotjaGi3g1v0288600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDSPVTVALALSLVGGFSTSIGALFVIVNPAPNLKMLGLLQGFAAGLMLSISFFDLAHNALNSLGFLKGNLWFFAGVLFF GVIASFIPEPSLAPTSNTKSRKKNGDEESKDGMKKHRRQVLFSGIVTAVGISLHNFPEGMAVFLGSMKGLRVGLNLALAI ALHNIPEGVAVALPVYFATESKWQAFKLASLSGFAEPLGVIIVAYLFPSSLNPEILEGLLGSVGGVMAFLTLHEMLPLAF DYAGQKQSVKAVFLGMAFMSASLYFLSICLPEDLSL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 5 | 5 | - | – | |
| PANTHER | 1 | 266 | 266 | 4.7E-138 | – | |
| PANTHER | 1 | 266 | 266 | 4.7E-138 | – | |
| TMHMM | 5 | 27 | 23 | - | – | |
| Phobius | 6 | 27 | 22 | - | – | |
| Phobius | 28 | 38 | 11 | - | – | |
| TMHMM | 34 | 56 | 23 | - | – | |
| Phobius | 39 | 59 | 21 | - | – | |
| Phobius | 60 | 70 | 11 | - | – | |
| TMHMM | 71 | 93 | 23 | - | – | |
| Phobius | 71 | 93 | 23 | - | – | |
| MobiDBLite | 94 | 114 | 21 | - | – | |
| Phobius | 94 | 119 | 26 | - | – | |
| Pfam | 99 | 260 | 162 | 1.2E-20 | ||
| MobiDBLite | 100 | 114 | 15 | - | – | |
| Phobius | 120 | 136 | 17 | - | – | |
| TMHMM | 120 | 142 | 23 | - | – | |
| Phobius | 137 | 155 | 19 | - | – | |
| Phobius | 156 | 176 | 21 | - | – | |
| TMHMM | 157 | 179 | 23 | - | – | |
| Phobius | 177 | 187 | 11 | - | – | |
| TMHMM | 186 | 208 | 23 | - | – | |
| Phobius | 188 | 207 | 20 | - | – | |
| Phobius | 208 | 218 | 11 | - | – | |
| TMHMM | 218 | 240 | 23 | - | – | |
| Phobius | 219 | 240 | 22 | - | – | |
| Phobius | 241 | 251 | 11 | - | – | |
| Phobius | 252 | 270 | 19 | - | – | |
| TMHMM | 252 | 271 | 20 | - | – | |
| Phobius | 271 | 276 | 6 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Biological process | Metal ion transport | The directed movement of metal ions, any metal ion with an electric charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Molecular function | Metal ion transmembrane transporter activity | Enables the transfer of metal ions from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi3g1v0288600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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