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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0314800 |
| Transcript ID | LotjaGi3g1v0314800.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | carboxyl-terminal peptidase, putative (DUF239); TAIR: AT2G20170.1 NEP-interacting protein, putative (DUF239); Swiss-Prot: sp|P30921|CDGT_BAC11 Cyclomaltodextrin glucanotransferase; TrEMBL-Plants: tr|G7LHN5|G7LHN5_MEDTR DUF239 domain protein; Found in the gene: LotjaGi3g1v0314800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:66702229..66708423) extracted from Lotus japonicus Gifu genome v1.2.
ACACGGTTGTTCAAAAAGTATGTAGTACAATATACTTATAACAAATTGTCTTTCATCATTTGTTATAACAAATTGTTTTT TTTTCACCATTCGTCCTTATATATATAAACGGGATAATACATGTGCAAACTATAACCTGATCAATTAGTTCATATCATTT TCACATGACAACTGCAGGAATGGTCATTATCTTGTTGCTTTGCTTGTGTTTCACACTCCAAAACTTTGAAGTTGATGGGC ATATCCCAAATTTATCCCAAAATGGATATTTGGATTCCGAGTTTGAGGAACGTTTGAAAATCATCAACAAGCCTCCCATC AAGAGTATTCATGTATTACCATACTCTCATCCTTTCAAAAACCCATTTTTAACTTTTTCTCTATTAATTTTTCTTTTTCT TTTTATATGTTGGTTTCTGCAGACAGTGTTTGGGCACATTGTTGATTGTATTGATATAAATAAACAATTAGCTTTTGACA ATCCTTTACTAAAAAATCATAAGATCCAGGTACTATATACTTTGACAGTAATCCTTTCCCTTTGAATTTGATATCCTAAG CCCTAAGCCTACAATTTTCCCCCACATGAATTGTTTATTTATATATTTTGTTGATATCATTATATATTTTGTTTAATTTC AGCTAAAACCCAGTTTCAAAGAAACTACAACTGAACTAAAGGTAAATGAAAGCATATTTCCTACACTTGGGAATGATTTG TGCCCTGAAGGAACAATTCCTGTTCGGAGAGCAACCAAAGAAGACCTCATCCGTGAAAAATTGTTCTCAAATAATATTGG TACCCTAACTCTGGTTAACCCTGGCACTCATGTAAGTTTTTTCTATAGCATGTTTCAAACAATTTTTTTGGTTGCACCAA ATATATATCCCTAAAACTTCTATAAGACTAATCCTCTCGATAATATGAGATCACAATACTCAAAAAAAAATTCTCCATAT TACCGCCTCAATGATCGAACCCTACACTAGACCTTGTTGGTAGCACGTTTCAAACAAATAATTGTTTTTAATTTTTATAA TCATTATTTTAAGTTAATTTCGCAATGAATAGATTACCGCACTTTTGTTCTTTATCCAAATTTTACAATGCGTAATTTGA AGTATGCTAACTTGTGAAAATGTTTTATTTGCAGTTTGCAGGAGTACGCTTAAATTTACGTCCAAAGGTCTATATCGGAA TTAATGGAACTATTAGTGTATATACTCCAACTGTTGAGGAGGGTCAAATGAGTTCTGCTTATATATGGGCTTCAAATGGA ACGGATCCTAACTACGAAAACAATATCCAAGCTGGATGGCAGGTTTTTATCCTTTTCTTTTGTTTTTTTTTTCTCTTAAT CTCTTGTTCTCATTTTATATATCTACCCAAAAATTACTACCAAAAATCTCCCATTTTATATCTTTGATTTACTTAAGATA ATTATAAATTCTAACTTTTTATTTGTACATATCAAACAGATGTCTTTTTTATAAAATAATTAAATAAAAAGTAATCATTA ATATGTAATATTTTATAACTTTTTATTCAATATTTTTAACTGAAATATATATATATATATATATATATATATATATATAA TGTTGAGAAATAACCCTCTTAATGTAAGTACAATAACCTAGACAACCACTACACCAAGAACCTCCCAAGCTCTGCAGGTC CCTTGACGCTATCCTCACTAAGCCAAGCCCCCCATTGAAATAGAAACAAACAATATCCATTACCCATACTGCCATTCGAT ACATGCTATCATGAAGCCTTGATGCACATAATTAGTTGGGTCATCCATTCGTAGATTGAACACTTGAAACCCTTCACCCT TCCTAATAGCCAGCGCCATGCTCGAATTTGTGCACCCTCAAGAATCGATCCTTCTTGATTTCTCTCCTCGTTGAAGATGA GATTGTTCCGGTGCTGCCACAAGGACTACATCACCGCATACCAGATAATTCGATATACTATATTCTGTTTTGATGTTAGG TTGTACATGTTGTTGGAGGTGTTCTCTAAAGCTCCCTGGTGTAACTGTAATCAAGCCAAGCCATTGGTAATACTTTTCCC ACACCCTACCAGTAGTCTGGCATACCACCAAGAGGTGGTCAGTTGATTCCTCTTCCTACAGGAAAAGGGGGAAGCAAATC TCCTCAATTAAACGAATGATCTTTCTCTTCCACAAGTTTCTACGAGTTAAAATTCCGTCTTTTATTTCCTTCCAAATGAA CACAAACATTTGATGGTGCCGCTGAAATCCAGAGAAAGAAGATGGGGTCACCAGCTCCCAGATGAGGGGCATGAATTGTC TTGTACACCGATTGAACTGAGTAGGATCCCTCCGGTTCTGCTGTCCAAATACATGAGCTAGAGATATCTCTTGTTAAAGG GTACCCATTCTTCACCGCACGAAGATCACCCACTAGAGCTCGTTCCCTCTCACTCAAATTTCCCTTCCATCTAAATATCC AAAACCACCTTCCATTCGTCCACTCGCCCATCTCTGAAATAACTTTGTTTTTTTTGGACAAAGAGATGGAAGAGTTTTCG ACATCTAGCCTTCAGTGGGATGTCCCCACACCAAGTTTTCTTCCAAAACCAGGTCAAATATGGACAGCCAATTTTATGCC TCAAAACTCTATCAAACCAGTAAGATCCTTCGTCGGGTTCGAAACACACCTTATATATGTCACATCACCAGCTTGAGTCT CGTGTCGTAGCATTAAACACTCCAATTTTTATTTGATTGCCATATCGATCCCAGATAACCCTGCTGCATAGATCATATTC CTGACCAAGAGCTTCCATCTCGACTTTCCCATAAGCGTCGTATTGGACATGTCTCAGTTTTTGACTACCAACCATCCATG CTCCTTTGGTTTACAGACATCATCCCATTTGACCCAAGTGATCTTGGACTCTAGCTCAGATCTGCCCCATAGGAAGTTCT GCATTATCCTCCTTGCCATTTTTAAAAACACCTTTTGGAATGCGGAAGACAGTCAGGAAGAACATAGGTATAGCAGCAAG CACAAATAATGCGTATTCTCTAGAGATTTCTATTCAAAGTAACCATCCATGAATAAACACATAAATTCAAAAAATGTCAT TAATATTATTAAATTTTTAAGACATGTTAATAATTTTTTTTCTATTTTATCTTTTAAAGTGTACTTGATTATCATTCTTC TTCCCCATTGTAGTTTACCTGAGAACGATTTTTGGAAGGCCCGGAACTTTTACCACATGTTTTCTTGTCAAAAAAAAATC TCCTCATTTGTTCTTTATATAGGAGCATTATATGGAAAAACATTACTCTCTTCATCATTAATTACATAATTATTTATAGA TATACTAGGTGTCCCTTTATACAAGACACCTTACTAGCTTTTAGAAATATTTATTACATTTTTTTCATGTATACCCCTTG TAATTTTTTTTGAGACAAAGCTTTATTCAAATTTAATAGAAAAGGAGATGAGGAAACCCTTGTATTTATTATACTTATGT AATTCCATTTTTTTAAAGCAAAACGATATATAATATATAAAGAGAGTGTTGAGAAATAACCTCTCTCAACAAGAGTACAA TAACCTAACAACATAAAGTTGATAACACCTGGCACTATAGCGCCCACCCCACCGAAAGGTCCCTACAGTAACCAGTTCAA CCAACACGGGAACCTATCAAACTGCTTGAAACCCACAAACAGAGACCAAGCTAGTTTCGAAGACCAAAATCCCCACCAAT CTAAGCCCTAACATAGCGGTATAGAGAATAAACCCATGACCTAAAAAGGAGCAGAAAAAATACAAGATAAACCATTAAAC AACAAGAACTAGTAGTGCCCACAAAACCTCCAAAACTGCAGACACAACACACAAAGATCTTTAGGAACCTTAAGAAACCC CAAACACAACCAGAACTCCCTCTATGGTTTGAAAAATAAAGACGAAGAAAGTCTTAATACTCTCTTGAAATTTTAAATTG ATAGTTATTATGAAATACATCTTTTTAAGTCGAGAGTTATTTTAAAATAGTGAGAATATAATATTTGTTTTGAATTATTA TTAGGTTATTAAGTTATTATGACAAAAAGAATTATTTAATGATTTCCTTCACATTGGTGCCAGGTATATCCAACGTTATC TGGAGATGTCAAAGCTCATTTCTACACATCTTGGGTAAGGAAATATGAATACACATGTCTTAGCATTAATTACAATAACA GTCATGGAATGTTGTATATATTTTTTTACCAATGTTCATATGTGATTAATTATCAGAGCATTTTAGTTTGTAACTTGATT TTAACTTTAAGTTATGGTGGTTATATTAGTGAAAGTTTATTTTGTTTGAACATGCAGTCAAATGGTCATCAGAAAACAGG ATGCACCAATTTGCTATGTGCAGGTTTTGTGCAAACTAGTCAAAGAATCTACCTGGGTACACCATTTAGTAGTACATCGA CCTATGGTGGACCAACATCTCAGATGACCGTCTCTCTTACTCAGGTAAACCTTTTTGTTTCCATAATCTCATTAGAGTGT ATAAGCAGAATTGTACTCTCTCCGTTTCAAAATAAGTGTCTACTTAGAGAAAAACTATTTGTTTCATGATAATGGTCCAC TAGAATTTCAATGAAACATTAATTGGTGATTTTCTATATAATGCCCCTAGCTATAAGGAGAATAAATTATGAGAGATAAA ATAGTACACTTTAAAGGATAAAATTTATATTATGTTTAAAAATTAACAAAATCGATTGCATTTTTTAATATATGTGCACC TCCTCTACGTGAACACTTTTATTAAAACGGAGCGAGTTTATAATTTGAACAACTTATTAATTAGGGTATACGTTCACAAT CGCTAAATATTATAGGGTATACGATCACAATCGCTACAGTGTTACTGTATGCAGTTATATATATTTATATGAAATTAATG TGATTTTTAGTTTCGTCCTTTTTATAATAATTAATTTGGATTTTGTAGTGCATTAATTACTTTGTAACAAGAATATATTT ATTTTTTTTTTACTTTCTCAATATTTTCACTCTCCTAAATATTAATGATGCATATAAATTAAGAAGAGTGAATTAAGGAC AATTTTTTTTTGAAAGTTCAATATTAATTGAGAACAAATTTAATGCACTTAATTATTTTAATTAGATTTTTTTAAACTAT GTAAATTAGTTTTTTAATTCTTATAAATAAGATCGGAGTCCCCGAATGATAGTTCAAGTGGTAAGAGTTGAAGGATATGT GCTTTTGGGAGGGGAAGGTCTAGGCATCGATCATTGGAGGGTGAAATTTATCTTTCTGATATGAAAAAAGGATCAGAGAT AGTACTTATAAATAACTGTGAATTAGCTACGTTTGCACAAATTCACATCTATTTTATCGCAAATTTACTGTTCACAATTT TATTGCTATTTTTCTATTTGAAAATCATAGTTCACATTTTTTTGATGAGAATAAATTTGGGAGGGTTTGGCTCCTGTTAC CATCACGAGTCAGAACATGTTTCCGGAATTATAAGTATTTTACAAATGTACTTATAGATTATCCACCAACACGACCCTCA CATCGACACAAAACATAACTTAAACACTCAATCTTCTAAGAAAAAGTGTCTCGTTCGTACTAAATGAGCCAACATGGAAA AAACCTCCATTAAGAGTCCTTGACTCAAACATGTTGTCTCACACTTCTAACAAAAATTAATCTCTTTATTATGGGTTTTT GTATTTCAGGAAGAAATTACTACTAACTGGTGGCTAAGGGCTGAGAACACATATATCGGATACTTTCCCAAAGAATTGTT TTCTGGTTACTTATATTATGCGGATCAAGCTGGTTGGACTGGTAAAACAATTAGAGGTAATCTTCCGAGTCCTCCAATGG GTTCTGGACACTTACCAGATGGCAATTATCGTCATTCAGCGTATATTGCACGAATGGCATATAGGGATCGACAAAGACAA GATGCTGTACCCCTTACAGGTGAGCTTGTTCTAGATGCTGACAGCCCCCAATGCTACAATGTGACATGGGATAAATATGT CGATGACAACCTACAACATACTATAGAATTTGGGGGACCTGGTGGCCTGGATTGTGAACCATGATGTTATTTTCTTTCCC AATTCAAATTAAACAAATGCATATGAAGAAGCTAC
CDS sequence (LotjaGi3g1v0314800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTCATTATCTTGTTGCTTTGCTTGTGTTTCACACTCCAAAACTTTGAAGTTGATGGGCATATCCCAAATTTATCCCA AAATGGATATTTGGATTCCGAGTTTGAGGAACGTTTGAAAATCATCAACAAGCCTCCCATCAAGAGTATTCATACAGTGT TTGGGCACATTGTTGATTGTATTGATATAAATAAACAATTAGCTTTTGACAATCCTTTACTAAAAAATCATAAGATCCAG CTAAAACCCAGTTTCAAAGAAACTACAACTGAACTAAAGGTAAATGAAAGCATATTTCCTACACTTGGGAATGATTTGTG CCCTGAAGGAACAATTCCTGTTCGGAGAGCAACCAAAGAAGACCTCATCCGTGAAAAATTGTTCTCAAATAATATTGGTA CCCTAACTCTGGTTAACCCTGGCACTCATTTTGCAGGAGTACGCTTAAATTTACGTCCAAAGGTCTATATCGGAATTAAT GGAACTATTAGTGTATATACTCCAACTGTTGAGGAGGGTCAAATGAGTTCTGCTTATATATGGGCTTCAAATGGAACGGA TCCTAACTACGAAAACAATATCCAAGCTGGATGGCAGGTATATCCAACGTTATCTGGAGATGTCAAAGCTCATTTCTACA CATCTTGGTCAAATGGTCATCAGAAAACAGGATGCACCAATTTGCTATGTGCAGGTTTTGTGCAAACTAGTCAAAGAATC TACCTGGGTACACCATTTAGTAGTACATCGACCTATGGTGGACCAACATCTCAGATGACCGTCTCTCTTACTCAGGAAGA AATTACTACTAACTGGTGGCTAAGGGCTGAGAACACATATATCGGATACTTTCCCAAAGAATTGTTTTCTGGTTACTTAT ATTATGCGGATCAAGCTGGTTGGACTGGTAAAACAATTAGAGGTAATCTTCCGAGTCCTCCAATGGGTTCTGGACACTTA CCAGATGGCAATTATCGTCATTCAGCGTATATTGCACGAATGGCATATAGGGATCGACAAAGACAAGATGCTGTACCCCT TACAGGTGAGCTTGTTCTAGATGCTGACAGCCCCCAATGCTACAATGTGACATGGGATAAATATGTCGATGACAACCTAC AACATACTATAGAATTTGGGGGACCTGGTGGCCTGGATTGTGAACCATGA
Protein sequence (LotjaGi3g1v0314800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVIILLLCLCFTLQNFEVDGHIPNLSQNGYLDSEFEERLKIINKPPIKSIHTVFGHIVDCIDINKQLAFDNPLLKNHKIQ LKPSFKETTTELKVNESIFPTLGNDLCPEGTIPVRRATKEDLIREKLFSNNIGTLTLVNPGTHFAGVRLNLRPKVYIGIN GTISVYTPTVEEGQMSSAYIWASNGTDPNYENNIQAGWQVYPTLSGDVKAHFYTSWSNGHQKTGCTNLLCAGFVQTSQRI YLGTPFSSTSTYGGPTSQMTVSLTQEEITTNWWLRAENTYIGYFPKELFSGYLYYADQAGWTGKTIRGNLPSPPMGSGHL PDGNYRHSAYIARMAYRDRQRQDAVPLTGELVLDADSPQCYNVTWDKYVDDNLQHTIEFGGPGGLDCEP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_EUK | 1 | 20 | 20 | - | – | |
| Phobius | 1 | 20 | 20 | - | – | |
| Phobius | 1 | 1 | 1 | - | – | |
| Phobius | 2 | 13 | 12 | - | – | |
| PANTHER | 2 | 386 | 385 | 5.3E-113 | – | |
| PANTHER | 2 | 386 | 385 | 5.3E-113 | – | |
| Phobius | 14 | 20 | 7 | - | – | |
| Phobius | 21 | 389 | 369 | - | – | |
| Pfam | 49 | 128 | 80 | 1.4E-20 | ||
| Pfam | 163 | 382 | 220 | 4.2E-62 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0314800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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