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LotjaGi3g1v0315100.1

Overview

Field Value
Gene ID LotjaGi3g1v0315100
Transcript ID LotjaGi3g1v0315100.1
Lotus japonicus genome version Gifu v1.2
Description Sulfotransferase; TAIR: AT5G07010.1 sulfotransferase 2A; Swiss-Prot: sp|Q8L5A7|SOT15_ARATH Cytosolic sulfotransferase 15; TrEMBL-Plants: tr|I3STZ9|I3STZ9_LOTJA Sulfotransferase; Found in the gene: LotjaGi3g1v0315100
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:66759979..66761389) extracted from Lotus japonicus Gifu genome v1.2.

GTAAAATTTGCATTATTGGCGAGATCATCTTTGGACCATTGATAAACAGGAAGATTCTTATGCTATAAATAATAGTTGGT TGAGACCAAAATTCTCGTGTTAATCATTACCATTAGTTCTCTGCTTTTCAAATGGCTTCAACAAATCTCACACATTCCAC AATAGAACACCAAACAAAGGCTGTGCAACAAGAAGCAAGTGATCAAGAAGACCATGATTTTAAGGAGCTAATTCTCTCAC TCCCTAGAGAGAATGGTTGGATAACCCCAGATTTCACTTTTTTCCAAGGCTTTTGGTGTGTATCAACTCTAATCCAACCC ATAATCACTTTTCAAAAGCAATTTCAAGCCAAAGACAGTGATATTCTTGTAGCCACCTTGCCAAAATCAGGCACAACCTG GTTGAAAGCCCTTACCTTTGCCATCACCAACCGCCAGCGCTTCTCCCCCTTAGAGGATCACCACCCTTTACTCAAATCCA ATTCCCATGAGCTTGTGCCTTTTCTTGAAATCAATTTTTATGGCCAAACCCTTGATGGCATTCCTCAATTTGACATGTCA AAAATGACTGAGCCAAGAATTTTTGGTACTCATATTCCTTTCAATTCATTGGCTAAGTCAATTAAGGACTCCAAATGTAA GATAATTTACATTTGTAGGAACCCATTTGACACTTTTGTGTCTCAATGGATTTTCCTAAACAAAATAAAGCCAGAGGAAT TACCTGAATTCACACTAGAGGAAGCTTTTGAAAGGTACTGTAAAGGGGTAACTGAGTATGGTCCAACATGGGATCACATG TTGGGTTACTTGAAGGAAAGCGTAGCTAGACCAAACAAGGTGTTGTTCTTGAAGTATGAGGATCTTAAAGAGGATGTCAA TTTTCATGTGAAAAGAATTTCTGAGTTTTTGGGTGTTCCTTTCACTCAGGAGGAGGAAAGTGGTGAAGTGGTTGAAAATA TAATCAAGCTGTGTAGCTTTGAGAAGATGAAGGATTTGGAGGTTAATAAATCTGGTACTTTGGGATTGAACTTTGAGAAA AAGTACTTTTTTAGGAAGGCTGAAATTGGGGATTGGGTGAATTATCTTTCCCCTTCAATGGTAGAAAAGTTGTCCAAAAT CATGGAAGAAAAGTTAAGTGGATCAGGGCTTTCATTTAGGAGTGATTAGCTACCTAGTGATTATCTGATACACTGGTTAT TATGTATAATAAGTGGCTACATTATAAGAGCTATGCATTTAGCTTAAATGTGTGGCACCAATGTTGTTGTGGTTTTTTCT TATGGTAAAATAACAATCGCTTAGTGCAAAATTAGATTCTCTTTTAAGATTTTGGATTACTAGAGGTGATAGATAAGTCA TATATATTCTGCAAGACTTTATTAAAAATAGTATCTAAAAATTTACTTCAA
Download Genomic Sequence

CDS sequence (LotjaGi3g1v0315100.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGCTTCAACAAATCTCACACATTCCACAATAGAACACCAAACAAAGGCTGTGCAACAAGAAGCAAGTGATCAAGAAGA CCATGATTTTAAGGAGCTAATTCTCTCACTCCCTAGAGAGAATGGTTGGATAACCCCAGATTTCACTTTTTTCCAAGGCT TTTGGTGTGTATCAACTCTAATCCAACCCATAATCACTTTTCAAAAGCAATTTCAAGCCAAAGACAGTGATATTCTTGTA GCCACCTTGCCAAAATCAGGCACAACCTGGTTGAAAGCCCTTACCTTTGCCATCACCAACCGCCAGCGCTTCTCCCCCTT AGAGGATCACCACCCTTTACTCAAATCCAATTCCCATGAGCTTGTGCCTTTTCTTGAAATCAATTTTTATGGCCAAACCC TTGATGGCATTCCTCAATTTGACATGTCAAAAATGACTGAGCCAAGAATTTTTGGTACTCATATTCCTTTCAATTCATTG GCTAAGTCAATTAAGGACTCCAAATGTAAGATAATTTACATTTGTAGGAACCCATTTGACACTTTTGTGTCTCAATGGAT TTTCCTAAACAAAATAAAGCCAGAGGAATTACCTGAATTCACACTAGAGGAAGCTTTTGAAAGGTACTGTAAAGGGGTAA CTGAGTATGGTCCAACATGGGATCACATGTTGGGTTACTTGAAGGAAAGCGTAGCTAGACCAAACAAGGTGTTGTTCTTG AAGTATGAGGATCTTAAAGAGGATGTCAATTTTCATGTGAAAAGAATTTCTGAGTTTTTGGGTGTTCCTTTCACTCAGGA GGAGGAAAGTGGTGAAGTGGTTGAAAATATAATCAAGCTGTGTAGCTTTGAGAAGATGAAGGATTTGGAGGTTAATAAAT CTGGTACTTTGGGATTGAACTTTGAGAAAAAGTACTTTTTTAGGAAGGCTGAAATTGGGGATTGGGTGAATTATCTTTCC CCTTCAATGGTAGAAAAGTTGTCCAAAATCATGGAAGAAAAGTTAAGTGGATCAGGGCTTTCATTTAGGAGTGATTAG
Download CDS Sequence

Protein sequence (LotjaGi3g1v0315100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MASTNLTHSTIEHQTKAVQQEASDQEDHDFKELILSLPRENGWITPDFTFFQGFWCVSTLIQPIITFQKQFQAKDSDILV ATLPKSGTTWLKALTFAITNRQRFSPLEDHHPLLKSNSHELVPFLEINFYGQTLDGIPQFDMSKMTEPRIFGTHIPFNSL AKSIKDSKCKIIYICRNPFDTFVSQWIFLNKIKPEELPEFTLEEAFERYCKGVTEYGPTWDHMLGYLKESVARPNKVLFL KYEDLKEDVNFHVKRISEFLGVPFTQEEESGEVVENIIKLCSFEKMKDLEVNKSGTLGLNFEKKYFFRKAEIGDWVNYLS PSMVEKLSKIMEEKLSGSGLSFRSD
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite
mobidb-lite
1 18 18 - –
MobiDBLite
mobidb-lite
1 25 25 - –
Gene3D
G3DSA:3.40.50.300
12 344 333 9.2E-106 –
PANTHER
PTHR11783:SF198
26 342 317 2.2E-149 –
PANTHER
PTHR11783
26 342 317 2.2E-149 –
SUPERFAMILY
SSF52540
42 343 302 1.9E-80
IPR027417
Pfam
PF00685
75 339 265 4.0E-68
IPR000863

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0008146
Molecular function Sulfotransferase activity Catalysis of the transfer of a sulfate group from 3'-phosphoadenosine 5'-phosphosulfate to the hydroxyl group of an acceptor, producing the sulfated derivative and 3'-phosphoadenosine 5'-phosphate.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0315100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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