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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0317000 |
| Transcript ID | LotjaGi3g1v0317000.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Mitochondrial inner membrane protease subunit 1; TAIR: AT1G23465.1 Peptidase S24/S26A/S26B/S26C family protein; Swiss-Prot: sp|Q9CQU8|IMP1L_MOUSE Mitochondrial inner membrane protease subunit 1; TrEMBL-Plants: tr|A0A1J7GXP1|A0A1J7GXP1_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0317000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:67127649..67133272) extracted from Lotus japonicus Gifu genome v1.2.
TTCTCCAAAATACCCATTTTATCTCATCGTTTCTGTCATTTTCTGCCGCCTCCATTTTACATTTCTTCACCTGCATAACA CAACTTCCTCCCACTATTTCTCATTTGATAACTTCCTTCTCTTGAATCGAAGACTCCCATCGTGCCTCCCCTTGTTCATC TCTCTGTTCAGTTCTCTCCTTGTTCATCTCTTTGTTCGGTGTAGGTGGGCACACATGCGATTGACCTGAAGTTGTGGAGC GGTGAATCTGAAAGTGGCATCAGGTGGTTCTGTTGCTTAGATCTGAACAGATGGTGGAAACACGGTGTCATAGATCTGAA CCAAAATTGCAAATTTGAGACATGCAATGATGAAATTTGGTTATATCTATGTATTTTGTTTTGGTTGATGATCTTCTATG TATTTTTTCATCATGGATTCTTCTCTGATTTTAGTCCATGTATGTATTTGTTTGAATGTTTGTTCAATAATTCTATTTCT TCACCGTTCACATCTCCTCTTCCTCCATGAGTCACGCCGCTACTGCAACCTCTTCTTCCAGCCTCCTTCCCCTTCTCTAC CTCCTTATGCTATGCTATAGAAGATGAATCATCCACACCCTTGTTCTCAGATTTCCCGGTGAAAGCAAGCCCAACAACTG CCACAGCCTTGAAAACACAGGTACGCCTTGCCTTACGCTCCTCTGTATCATTTATGCAATTTTATCATCTATTTTATTTG ATTCTCATAAACTAGAGCTTGTTCTATTTCATCACCTTTATGTTTTTGTTTGTTGATGAAAACAGAGAGAGAATAAACAA GTATCTCATTCATGGGGCTGAGAAACTTGGGGTCATTTGGGCCTATTATAAAACAAGCGTGGGGATATTCATCCTTCTGT GTAAAGTTCGGCTGTTTTCTCCATGTTACCACCAAATATCTCATACTCCCTGTTACGGTAAGCATGAGTTATCTAAATTA TTTTTCATCATTAATAAATAACAACTATATATCCTATTCCAATGTTGCTTGCAGACCTATGGTCCTAGCATGCTTCCTGC AATTGAATTGACTCCAAGCTTGTTTCTCACTGAAACCATCTCTGCCCGATCTGGTCAAGTTACTCGCGGAGATATTGTAT GCTTGTGCTCACCTGCAAACCCCACAACGTTTATCACCAAACGCGTCGTTGGAATGGAGGGTGATACTGTTACATACTTA CCTAGTCCCATGGACAGTGATCAACTTGAGACTATTGTGGTTCCAAAGGGTCATGTTTGGGTGGAGGGAGATAACATCTT TAACTCCAAGGATTCTAGAAATTTTGGTCCTGTTCCTTATGGCCTTATTCAGGGCAGGATATTTTGGAGGGTAGGTTTAT GTATGATCTAAACACACACCACAGTCACAAGCCTACACCTCCTTTTCCCCGCTTTTTTCCTTTGTCAATTTTCCCTAATC TTTTGATGTCTTGTCTGAAGGTATTGCCACTTAAAGATTTTGGACCTTTTCTGAGAAGATGATGATATGAAGCTTTCAAT CATGTAAGTTACAATGTTGCTGTTTAATTTTGAAAGGAAAAACAATACCTACTATTTGTACTTGTTCAACCTTTTCTTTT GCACGTTTTGGATTTCTCTTCCCAGACCTGTGCATTTTAATCACCTTTAGATTCTAAGTTACATTCTTTCTTCTATTACT TATAAATACAATATACACTTTAGCGATTGAGTATTCATCTTTTGTTTCTGGATGATAACTAATATCTATTTCATCGGTCG TTAAAAATACGTTTCTCTCACTAGATTTGATAAGAAAATTGAATCAAGGATGCACGAAATCCTTGGCAACTTACTGGCTT TGAGCGAGGTTGGGGGTGGTTTTGTTCTTGAATCAGGCAACCAAGCGTCACAAAAATTTGCATCAAAATCTCTTGTCATT CCTAAAACTGGTTTGGCCGGAATGGGTAGGAGTAGGAGTAGGACCACCACGCCTATGAAATACGACTGCATATGGGATAA ACTGCTTCATTTAAGATATCTGCGGATTAACCCTGTCTTGGCGGTTAGATATTCCAATTTTATTAACATGCCTTACTCCA CTACAAACTTAAAATCGTTGAAGTTGGTGGGTCTGAACGAAACATTATTGGAACATAAGTTGGCTCACTCAATAAGCCAT CTTAGATTTCTCCAATCTCTTGACCTTTCTGGTACCGCAATCGAAGATCTACCTGATTCAATGTGTTTCCTCCATTACTT GACAAATTTGAATTTGGCGGGTTGTTCGAAATTGCATAAGTTGTCTGACTCAATAGGCAATTTTAGACTTCTCGAACATC TAGACCTTTCTGGTACTGCAATTGAAGATCTACCTGATTCAATGTGTTTCCTCTATAACTTGACAAATTTGAATTTGGCG GGTTGTGCAAAATTGCAAAAGTTGCCTGGCTTAATAGGTAATCTTAGGCTTCTCAAGTATCTAAACCTTTCTGGTACTGC AATCCAAGAGCTACCTGATTCAACATGTTTCCTCCATAACTTGACAGATTTGGTCTTGGCGGGTTGTTCAAAGTTGCAAA AGTTGCCTGACTCAATAGGTGATCTTAGGCTTCTCAATTATCTTAACCTTTCTGGTACTGCAATTGAACAGCTACTTGAT TCAACATGTTCACAGTTGAGCTTGGTGGGTTGTGAAAATTTGCAAGAGTTGCCGATTATTCAGACACAACCTGATTTTAT ATTTCTTAATGTTACGGGTAAAATCATGGTGTTAGAAAAAGAAAAGACTCTTAAAGCATTGTCTTGTATGAAGTCTAACA TTCAGCCGTTAAGAGAACTCAATCCTCATCGAACGCTAATATATTCAGAGCTGGTGAAAGAAGGTAGAGCTCTGCCAAAG TTGCGACCTTATAATTTGGAATTAACCAATTGTTTTTATGGGAGACAAAAAGAAAAGGATCAAGTTATTGAATTTTTGCT ATCCATGTCTGATTCCGATGATGACAGCACAAACACAGGCATGCCTGTGCTTGGTATAGTGGGCCCAGGTGGGATTGGGA AGACGACACTTACTCGTGTTGTTTATGAGGATCACAAAGTGAAGGCATGGTTTGAACTTAGAGTTTGGTTAACATTTCCT AGTTACCAACTGGATGCTGAGACTTTAGCAAGAATCATGCTTGGAATTCTCAAAGTTGATTTCGACCAAGATGACGTGTT GCAAGACCTGATACCTCTCTTACGAAAGAGCTTCACTGGAAGGAGATTGCTGCTTGTGTTGGATGGTTGTTGTGTTGTTC ACCAGTGGAAGATCCTTCAAGCATGCTTTGAATGTGCTGCAAGAGGAAGTGCCATCATCCTAGCCACAGGGACCACGGAG GCTGCATTACAAATGCTTGCTGATCATGTTCTGCATCTGGATTTCTTATCCATGGAGCATTGCTGGTCCGTGTTTTCAGA GCATTGTTTTGGAAACCAGAGGCCCGGTTGTTCTCCTCAGCTGGAAGAAGTGGGAAGAAAGATCTTGGAGAAATGTGGGG GTGTTCCTTTAGCTGCTAAAATGCTCGGGGGTCTCCTACACAAGAAGGAATATAAGGAATGGGTGGATATATGGAGGAGC CCAGAATGGGATCGGACCAACATGGATCTTCCTATCCCTTTTGTAAGATTATTCTATCTTGATCTTCCTTCGCAACTAAA ACCATGCATAACTTATCTTGTCATCTTTCCTAAGGGTTACAAATTCAAGAAGAGGGAAGTGGTCCTCTTGTGGATGGCAG AAGGTTTCATTCCGCAGGAATATAGTGAAACCATGGAGGAGCTTGGCTATAAGTATTTTGATTTTCTTGTAGCAAGATCA TTTCTCATAAGGTCACATAGTGGTGACAGCATGGATTTCACAATGCATGATATGGTTCATGACCTAGCTTTGTCTCTAGC AAACTTTCATTTCAGCTTTGATGGAAATGGTGATATCGTTGATACCTCAGGCTTGATCTCGGATATGCAATATTTTGAAA GAACATCATCTGAGCTACATGGCTCCAGAACAGAAGAAGATATGAACTTGAAGTATAGTACTTACATCGCTGACACGTCT CATGGCCATGGCGCACAATCTCCAATCAATGCAAATGCTGATGTCCAAAATACATTTGATTTAAGGACTTGTTTTGAAAG CCTTAAAGTTTCAAATGTATTACAGCTTGTGAATTTACCATCTTCACTGCTGATGAACAAATGCACCAATCTCGCGGAGT TGTATATAATTGGTTGCTTTTCTCTCAAGAACTTGACTGAGCAGTGGTACCCCAGTTCCTTGAGAACCCTTTACTTGCAC AAGTGCAGAAAATTAGAGTTCCTCCTACCCTTTACTTGTAATTTTGAATTCTTGGAACATCTGTTCATTGGTAGTAGCTG TGAATCTATGAAGTCTTTAACCTTAAACCTTTTCCCGAAACTTAAACTTCTTTGTATCTGGGATTGTCCCAATTTAGAGT CCCTTACAATAGAGGAAAGCCAGAGCAATAATCTTTCACTTGAGTCTCTGGACATTCGGGGTTGCTCCAATCTCGTGTCC TTCCCAGCAAAGGGATTGCTTTCTCCCTGTCTTAGATCACTTTCAGTCTCCAATTGCGAAAATCTTAGGTCACTTCCCAA TTACATGAACAGTCTCACATCTCTTCAATCAGTAATTTTAAATAGATGCCCAGAACTTGAGTCATTACCTGAAGGGGGGC TACCTTCTTGTTTGAAGTTGCTGTCTATTGGCTTTTGTGACAAACTTATACCACAAAAGGAGTGGAATTTAAAATCACTT CACTGCCTTCATCGTTTCGAGATTGAAAGTGGATGTATGGGCATGAAGTCATTCCCAGAGAAAGACCTTTTCCCTATTAA CCTCAACTCTCTTTACATCAGCAAACTCCCAAGTCTAGAAGTCTTGGATTACCGTGGGCTTCAGCAGCTGACAGCTCTTG AGTCACTGGAGATCAACTATTGTGAGAAACTAAGTTCCTTGCCAGAAGTTTTGCCTTCTTCCTTGACTTTCCTTGGCATC AAAGAATCCCCAATGTTGACTCAGAAGCTCTTGAATCCGGTAGGTGCAGATTGGTTCAAGATAGCTCATATCAGTAACAT AAAAATCAATGACAGTGTTTTCTCAAGATAGAGTGCTGGTGCCTCTTTTGTGTCAAGGAATAAGATTCAATCTCAGACAA CACTTGAAGTTCTTTCCAAATTCAGATGAGCAGGTGGCTGAGGCTTCGGTGGGAGAAAGCAGTTGACCAAGGATTTTGTG ATGGAAGAGCAGGTGGCTGTGGCTTTGGCATAAGAAGAGAAGATGTCTGAGTCTTCCATTTTTTGATCAAATGGTAAATG CTGCATTCTTCTTGAGCTATAACAATACCTGCTCTCATTTATATTGATGTTTTTCTAATATTTCAATTTAAAGCTGCAGG ACATATTCGAGAACGATGGCAGTTTGGCTGACAGAAGGCTTAGTTCACAGGGCAAAAAAACTAGAGCAGAATTTAGTTCT CATGAAGTCGTGTGATATTATTGTGTAGGCCTTTCAATGGGTCAAGCGTGTTAACCAATTCTATTTCTATATTAGTATGA TCACTTGTAAATTGATACATATAC
CDS sequence (LotjaGi3g1v0317000.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGGCTGAGAAACTTGGGGTCATTTGGGCCTATTATAAAACAAGCGTGGGGATATTCATCCTTCTGTGTAAAGTTCGG CTGTTTTCTCCATGTTACCACCAAATATCTCATACTCCCTGTTACGACCTATGGTCCTAGCATGCTTCCTGCAATTGAAT TGACTCCAAGCTTGTTTCTCACTGAAACCATCTCTGCCCGATCTGGTCAAGTTACTCGCGGAGATATTGTATGCTTGTGC TCACCTGCAAACCCCACAACGTTTATCACCAAACGCGTCGTTGGAATGGAGGGTGATACTGTTACATACTTACCTAGTCC CATGGACAGTGATCAACTTGAGACTATTGTGGTTCCAAAGGGTCATGTTTGGGTGGAGGGAGATAACATCTTTAACTCCA AGGATTCTAGAAATTTTGGTCCTGTTCCTTATGGCCTTATTCAGGGCAGGATATTTTGGAGGGTATTGCCACTTAAAGAT TTTGGACCTTTTCTGAGAAGATGA
Protein sequence (LotjaGi3g1v0317000.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGLRNLGSFGPIIKQAWGYSSFCVKFGCFLHVTTKYLILPVTTYGPSMLPAIELTPSLFLTETISARSGQVTRGDIVCLC SPANPTTFITKRVVGMEGDTVTYLPSPMDSDQLETIVVPKGHVWVEGDNIFNSKDSRNFGPVPYGLIQGRIFWRVLPLKD FGPFLRR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 8 | 165 | 158 | 5.7E-68 | – | |
| PANTHER | 8 | 165 | 158 | 5.7E-68 | – | |
| Gene3D | 33 | 162 | 130 | 2.6E-20 | – | |
| PRINTS | 36 | 52 | 17 | 5.2E-13 | ||
| SUPERFAMILY | 36 | 164 | 129 | 1.31E-35 | ||
| CDD | 40 | 151 | 112 | 1.08432E-21 | – | |
| Pfam | 45 | 112 | 68 | 9.7E-5 | ||
| PRINTS | 89 | 101 | 13 | 5.2E-13 | ||
| PRINTS | 118 | 137 | 20 | 5.2E-13 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. | ||
| Molecular function | Serine-type peptidase activity | Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine). | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
Expression pattern of LotjaGi3g1v0317000.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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