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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR000223
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 20 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 0.031s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0127859.1
n.a. PREDICTED: probable thylakoidal processing peptidase 2, chloroplastic-like isoform X1 [Cicer arietinum] gi|502132978|ref|XP_004501603.1| chr0 57690786 57693928 -
2 domain predictions
3 GO terms
Lj0g3v0127869.1
n.a. PREDICTED: probable thylakoidal processing peptidase 2, chloroplastic-like isoform X2 [Cicer arietinum] gi|502132980|ref|XP_004501604.1| chr0 57691904 57693928 -
4 domain predictions
3 GO terms
Lj1g3v0874250.1
n.a. PREDICTED: chloroplast processing peptidase-like [Cicer arietinum] gi|502135983|ref|XP_004502521.1| chr1 11133536 11137543 +
4 domain predictions
3 GO terms
Lj1g3v2313110.1
n.a. PREDICTED: mitochondrial inner membrane protease subunit 2-like isoform X1 [Cicer arietinum] gi|502159227|ref|XP_004511435.1| chr1 27257514 27259783 -
4 domain predictions
3 GO terms
Lj1g3v2315340.1
n.a. PREDICTED: mitochondrial inner membrane protease subunit 2-like isoform X1 [Cicer arietinum] gi|502159227|ref|XP_004511435.1| chr1 27335510 27337779 -
4 domain predictions
3 GO terms
Lj3g3v1037650.1
n.a. PREDICTED: mitochondrial inner membrane protease subunit 1-like isoform X2 [Cicer arietinum] gi|502087890|ref|XP_004488671.1| chr3 13771442 13778119 -
3 domain predictions
3 GO terms
Lj3g3v1037650.2
n.a. PREDICTED: mitochondrial inner membrane protease subunit 1-like isoform X1 [Cicer arietinum] gi|502087880|ref|XP_004488670.1| chr3 13771442 13778119 -
4 domain predictions
3 GO terms
Lj4g3v3071630.1
n.a. PREDICTED: chloroplast processing peptidase-like [Glycine max] gi|356523807|ref|XP_003530526.1| chr4 40878034 40880445 -
4 domain predictions
3 GO terms
Lj5g3v1073880.1
n.a. Peptidase S24/S26A/S26B/S26C family protein isoform 1 [Theobroma cacao] gi|508702546|gb|EOX94442.1| chr5 17475530 17482990 +
2 domain predictions
3 GO terms
LotjaGi1g1v0265100.1
n.a. Signal peptidase I family protein; TAIR: AT3G24590.1 plastidic type i signal peptidase 1; Swiss-Prot: sp|Q8H0W1|PLSP1_ARATH Chloroplast processing peptidase; TrEMBL-Plants: tr|I3T671|I3T671_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0265100 LjG1.1_chr1 64778533 64782934 +
3 domain predictions
3 GO terms
LotjaGi1g1v0350400.1
n.a. Processing peptidase; TAIR: AT1G06870.1 Peptidase S24/S26A/S26B/S26C family protein; Swiss-Prot: sp|Q9M9Z2|TPP2_ARATH Probable thylakoidal processing peptidase 2, chloroplastic; TrEMBL-Plants: tr|A0A151TBY9|A0A151TBY9_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0350400 LjG1.1_chr1 82057096 82060430 +
3 domain predictions
3 GO terms
LotjaGi1g1v0440100.1
n.a. Mitochondrial inner membrane protease subunit 1; TAIR: AT3G08980.1 Peptidase S24/S26A/S26B/S26C family protein; Swiss-Prot: sp|Q6AZD4|IMP2L_DANRE Mitochondrial inner membrane protease subunit 2; TrEMBL-Plants: tr|I3SVG3|I3SVG3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0440100 LjG1.1_chr1 93607816 93611709 -
3 domain predictions
3 GO terms
LotjaGi3g1v0255600.1
n.a. Mitochondrial inner membrane protease subunit 1; TAIR: AT1G53530.1 Peptidase S24/S26A/S26B/S26C family protein; Swiss-Prot: sp|O74800|IMP1_SCHPO Mitochondrial inner membrane protease subunit 1; TrEMBL-Plants: tr|A0A1J7HFV5|A0A1J7HFV5_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0255600 LjG1.1_chr3 43824563 43837402 -
3 domain predictions
3 GO terms
LotjaGi3g1v0255600.2
n.a. Mitochondrial inner membrane protease subunit 1; TAIR: AT1G53530.1 Peptidase S24/S26A/S26B/S26C family protein; Swiss-Prot: sp|Q9CQU8|IMP1L_MOUSE Mitochondrial inner membrane protease subunit 1; TrEMBL-Plants: tr|A0A1J7HFV5|A0A1J7HFV5_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0255600 LjG1.1_chr3 43824563 43837402 -
2 domain predictions
3 GO terms
LotjaGi3g1v0255600.3
n.a. Mitochondrial inner membrane protease subunit 1; TAIR: AT1G53530.1 Peptidase S24/S26A/S26B/S26C family protein; Swiss-Prot: sp|Q9CQU8|IMP1L_MOUSE Mitochondrial inner membrane protease subunit 1; TrEMBL-Plants: tr|A0A1J7HFV5|A0A1J7HFV5_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0255600 LjG1.1_chr3 43825898 43837385 -
2 domain predictions
3 GO terms
LotjaGi3g1v0255600.4
n.a. Mitochondrial inner membrane protease subunit 1; TAIR: AT1G53530.1 Peptidase S24/S26A/S26B/S26C family protein; Swiss-Prot: sp|O74800|IMP1_SCHPO Mitochondrial inner membrane protease subunit 1; TrEMBL-Plants: tr|A0A1J7HFV5|A0A1J7HFV5_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0255600 LjG1.1_chr3 43826064 43837350 -
3 domain predictions
3 GO terms
LotjaGi3g1v0317000.1
n.a. Mitochondrial inner membrane protease subunit 1; TAIR: AT1G23465.1 Peptidase S24/S26A/S26B/S26C family protein; Swiss-Prot: sp|Q9CQU8|IMP1L_MOUSE Mitochondrial inner membrane protease subunit 1; TrEMBL-Plants: tr|A0A1J7GXP1|A0A1J7GXP1_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0317000 LjG1.1_chr3 67126971 67135568 -
2 domain predictions
3 GO terms
LotjaGi3g1v0317000.2
n.a. Mitochondrial inner membrane protease subunit 1; TAIR: AT1G23465.1 Peptidase S24/S26A/S26B/S26C family protein; Swiss-Prot: sp|Q9CQU8|IMP1L_MOUSE Mitochondrial inner membrane protease subunit 1; TrEMBL-Plants: tr|A0A1J7GXP1|A0A1J7GXP1_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0317000 LjG1.1_chr3 67127594 67135568 -
2 domain predictions
3 GO terms
LotjaGi3g1v0317000.3
n.a. Mitochondrial inner membrane protease subunit 1; TAIR: AT1G23465.1 Peptidase S24/S26A/S26B/S26C family protein; Swiss-Prot: sp|Q9CQU8|IMP1L_MOUSE Mitochondrial inner membrane protease subunit 1; TrEMBL-Plants: tr|A0A1J7GXP1|A0A1J7GXP1_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0317000 LjG1.1_chr3 67127649 67133272 -
2 domain predictions
3 GO terms
LotjaGi4g1v0448900.1
n.a. Signal peptidase I family protein; TAIR: AT3G24590.1 plastidic type i signal peptidase 1; Swiss-Prot: sp|Q8H0W1|PLSP1_ARATH Chloroplast processing peptidase; TrEMBL-Plants: tr|A0A151T3K0|A0A151T3K0_CAJCA Uncharacterized protein; Found in the gene: LotjaGi4g1v0448900 LjG1.1_chr4 82122106 82125240 -
3 domain predictions
3 GO terms