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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0318600 |
| Transcript ID | LotjaGi3g1v0318600.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | ADP-ribosylation factor family protein; TAIR: AT2G18390.1 ADP-ribosylation factor family protein; Swiss-Prot: sp|Q9ZPX1|ARF5_ARATH ADP-ribosylation factor-like protein 2; TrEMBL-Plants: tr|A0A151TIG1|A0A151TIG1_CAJCA Putative ADP-ribosylation factor family; Found in the gene: LotjaGi3g1v0318600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:67414759..67420726) extracted from Lotus japonicus Gifu genome v1.2.
GGGAGAAAACTAAATTTTTATTTTATCTTCTGTAAGCCTTTATATATATTTTTCCTTTCATTTATTCAAGTTTACCAAAA TGCTACTAGTTTTTTAACTTTTAATGCTAGTTGACCTCTATAAATTCCTGCACAAACAAAAGGTGATATATCAGTGTGGA ATGGTTAGCAGGGGAGAAAACTAATTTTTTATTTTATCTTCTGTAAGCCTCTATATATATTTTTCCTTTCATTTATTCAA GTTTACCGAAATGTTACCAAATTTTTTAGAGTTTTTACCTTGAAAATTTAGATACAGTTGGGTTAAATAATTGTAGCAGA TTGAGTAAAATTGTTTCCCTTGGACAAAAAAAAAGCCTGGTCCATCCCTCCCTTCTCTCTCTCTCAGAAAGAAGCATTTT TGCTTTCTCACTCACCTCCCGCACTCTGACCCACCATCGAATTTCCTTGCTTCGTCGCCGCCATCACTCCTTGATTTCGC ATGTAAGCTTCTGATTCCATTGTCCATCCCTCTCTTCTCTCTCACGAATTTGTGATGTGGTGTTGAAGAATTCCTCTCCC TCACCAAGAACTTCATCTCCTACTACTTTGTAATTTTTTTCTTCAAGCATTTAGAATGAGGGAAAAAGATTAATAGGAAG GAACAAATTCAAAATTAAAAGGAAAATGGGTCTTCTGAGCATCATTCGGAAAATCAAAAGGAAAGAAAAGGAAATGCGAA TCCTTATGGTGTAAGCGCTGCTTCCTACTTCTCTCATTTCCTTCCATTTCCTTCACCTTAGTAACATTCAAAATCACCTC TTTTGCAGTGGGTTGGACAATTCTGGCAAAACCACAATCGTTTTGAAGATTAATGGCGAGGACACTAGTGTCATCAGTCC TACCCTTGGCTTCAACATCAACACCATCTCCTACCAAACGTAATAAACCTTTCCCTACTTATTTTGTATCAATGTTATAT ATTTTATTAGAATAGCTCTTGGAGTTTTAATTAAGAGTGAATGGTCAAATTGACACTTAGAAGTGTTCGGCGCCCGGCAC CTCCGTCTTTAGAAGAAGGAAATTACTCCCGCGGTCTCTAATTGTGTAAAATACTAACATGACTGACATTTTACATAGGG ATCGCGGGGAATCCTGAATCCATGGACGAACTTGCTAGCACCGAATACTTTCAGGAGCCATTTTGCATGATGATTTCTGC ATTCTACTTAAGGGGAAAACATGTGATCTTACTTCTTAATTTGGTTGTTGTATATTCTAAGAGTATAGTAGGTTTGTTTC TTGAATATCTGTGAAAGGTTTTGCTTGTAATTCCTTCAATATACGTTGTTAGCCTTTGTTTTGCTTAGTATCTCGCTGCG ATCTTACTGGAGGAACTACTTTGAGCAAACAGATGGTTTGGTTTGGGTAGTTGACAGTTCCGATCTCAGAAGGTTGGATG ACTGCAAAATGGAGCTAGATAACCTTCTAAAGGAAGAGGTTCGTTCAGTACAAAATGGTTTTTGCTTATTCCCCCATCAA ATTGCTTACAGTACATGCTGTACTTAACTGAAGATATTCAGTCATTTTTTCTGCCCCTTATTAATTCATGTCCAATATGT TTGATCAATTGGTTGGCATAAACCATTGCGTCATATGTGCCTCTGTATCCAAGCGCAGTCATTGCAAAAAGGGAATGCTT TGCAGGACCCCAAATCCAGTTGCTTTCCTTTCCTTATGATAACTTACTTACCTCATAGGAGACATGATTTTTTAAATGGT TACCAAAAAATATTAAGTACTTCCATTTAAAAAAGATAGCTGTGTTTGTTTCACCAAAACGAGCTAATAAGTGTTTCTCA TTGTTGCTAATTTGGAATGCTCAAATGATTACTCTTTTCTTCGTCGGGGGTTGTGAAGTACTGGTATTTTCAAATCTCAA TAGTTTTATGTTTTAAATGACAGCGGCTATCAGGATCATCCTTACTGATACTAGCAAATAAACAGGACATTAGAGGCGCA CTTACACCAGATGAGATAGCTAAGGTAAGCTTACTTTTATTTGGGGGGCGAGGGGGGTTGTTAACTTAGCATTATAGGAA CTATGACTATAAAAATACATAATATGTTGAGTTTTAGTGAAACACATGATGTTTTTTTTTAACTAAATGGGCCTTTTCCT CTGGTCCTCTCAATCATCTCTTGCAGTGGTTATTTTCTTATTTAAATAATTGCTTACAGAGCTTCTCATAGAAATAGCTC CAATCAAGTCTCAACCAGGGAGTTTAAATATCCAACCATAAGTAGTTACAGTATTCATTCTGAGTACAAATTTTACATGA TAATCTTTTCAGGCGCTGAACTTTGTCTTGGTGTGTATTTGTGGAACGGCAGTCGGGGAGGCATGGTTGGTAAACTTAAC TTAAATGTTGTGTAAAACCAATCATCGTTAGGACTTTCTGGAATATTTGTTGACTGAACATTATATTATTAGCTGATCTT CTATTCAAACAATGGTTATTGAGAGGTAGTAAGTTTCATGCATGAATGATCCTACTTCATTGAATTGAATGCATTGACTG ATAGGAACCCAATAGTTAGGGATAGGCCCAATACTACTAAAGTCCATGGGCTGTGCAGGTAGTGGGAAAGAGAGAGAGAG AGAGAGAGAGAGAGAGAGAGAGAGAGATTGGGGATTATATAAACATGTATTGTGTGAGAGAGAGGTTAGGCAGAATTTGA GTTAGGAATTGGGAGAGAGAGACACTCTCGAAATTGTCTCATTCTATCTTTGTTTTTCTACTATTTTCCTTGTAAGCTCT ATCATAGAATTTTGGGTTATCTCCAGAATTCTCAGTAAATAATATACTGTTTCTACATTTCCTTTCTGAAAAACCGGGTT CTAACATTGTTATCAGAGCATAGTTTACAGTGGAGCATACTTTAAAGTCCACTGTTTTACATTGGTATTTGGTATACCTT TTTTCTCTTTTGAAGTGGGGGGTTTGTAAATGTTGACATTTAAAATTTATCATTTTATAACGGCTATAAACTCGTAAGCC GAAAGATATATTAGCCAATATATGAGTAGTTAGTTTTTTGCCAAGTCAGGGTAAATAGTTGAATGAGCCTTGCACATGGA CGGGATTCATGGACAAATATAGAAGCTTAGGTCTGAGGATGAAGATGTTTTCATGTATGGGCTTAGAATCTAGGTTTATG ATAGAGTGGTGATTAAGCCACCTGTCAAGAAAGTGTATGCTAGGAGAGAAAAGGGAAATGTGGTGGGTTCTTAACCTGTT TACCAGGTCACAATTGCTAGTTATTGTGAGTAGTAGATTGAGTAGGAACTGGCAGAGTAGGTAATAAGTGTAACTGCCAG TGTCATTCTTGTTTCAGTTTAGTGAATAAAAGGGGAAAAATGTTAGGGAATAACCACCTTGTGGTCATTGTGAGTGGGAG AGATCCTGACCTCTCGAATTGTCAGAAGTTGTAATTGCTTTTCTCTGTTAATAGAAATCATTCACTTTCTCTATTCTACT GTTCTTGTTCTTCTTGAACCCTAAATCTCTGGAACACTCTATCAGTTTAAACACGTGGAAATTGGATATGGTGTCACTCC TTAAATATAGGTATAACTGTCACAAGCTTGGGACCAGCCGATACAAATATATAGGTTTTAACAGACAGTTTCTCTGTTCA GGGCACTTTAGATATGGACGGGTTAATACTGTGCTTCAAAAGATATGTAGGTCATGGAAGCAACAAGAGTCTTTTCTCAC TAGGTGGCATTGACAAGGTGTATCAAAAAATTGTCATGATATGTGGTACACATTTAACAAAATAATGTCAAGTAAAATAG TTTGTTCATTTGTCAATATCTGGAACTCTGAATAAGGCTATGTTTGGATAAAATAGGATGGAATGGAGTTGAGTGGAGTG AAATGAAATAGAATAATATTACACTTTCATTGTCTGGATTTTTTTTAGGGAATAGAGAAAAGTACTTGTTTTATCTCATT CCCCCTCCCCTATATTGGATGGAATGGGATGGAATGCATTGTGATCATGGTCTATTCCATTTCACTCTGTTTTAAAACTT TCAAACAATGGTATCTGTTATAATCTTACTCTACTCCATCAATTCAAACATAACTTAATAGAAGCACCCCAAGCATATTC TTGCAGTAATGTTTCAACAGCTTTGAACCGATTTCAGTAGTTTAGGCGTCAAATTTGTTCAAAGTACTCAATAAATTGAT AAGTATTGCAAAATTTGAATTTACTTACTTTCAGAAAACAAGGGATCTAATTGTTGGATATCATTAATATATAATTGTTT ATTGTAAGTGTTTTATTTTCTAATATGCTGTGACTGTGCAGGTGCTGAACTTGGAAGCTATGGATAAATCTCGGCACTGG AATATAGTTGGCTGTAGTGCATACACTGGTGATGGTCTTCTTGAGGGATTTGATTGGATGGTCCAAGACATAGCCTCTAG AATCTACATGCTCGACTAATGATTTTTATGTCATTAGTCATGAAATGGTTCAACTTAGAAAAGCATCTTAATCTAGGCTT AAAAGCAGTTTATACCCCTCAAGTTTAACACAATTGCGATTCATACCCCTGTGAATTTTTAGTGCGAAGTGTAACCTACA TGTTTCAGAAAGGTGCAAAACCTACCCCTCCGTCAGCCTTCCGTCTAAAACTTGAAAAAAGTGCTGATGTGGCATTTTTA ATTTTTTTTTATTAAATTTAAACTTAAAATATTTAATTAAAAATTTCAGGTACCAAACAAACTAAAGAAAATAATAATTT ACGGATGAATCATCTTCACCTTCTCCACACCATCGAAACCCACCACCTCCACCACCAAATCACCCTCTCACCCAACACCA CCACCACCACCAAATCCCCCTCTCACCCAACACCACCACTACAACCATAAATCCCAGCTATCCACGACCCACCATCAAAC CCAGCTACCCACGACCATCAAACCCAGCCGCCCATGACCACCACAACCCACCATCAAACCCAGCCACCCACGACCCACCA CAACCCACCATAACCCCAAAACCCACAACCCACAAACCCAACACTAAAAAACCCAAATTTGAAGGGGGAAGAAAGGGATA AACGTGTAGATCTAAAGGAAAACCACAAATCCATCAATTTTTGTTCTTCCCCCTTCAATTTCGCAGTTCAAATTCGTGAT CTGGGTTCTGAATGATGATGATGGTGTGGATGATGTTCTTGGGTGTTGTTATTGGGAAAATTGGGTGTTCTGGAAAATTG GGGAAAAGTGGTGGTGTTGTTGTTGTTTGATGTTGATGATGTAGGTGAAGAAGAAGAAGAAGGAATGAAGGTAGGCTGTG TGAAGAAGGTGGCTGCGTGAAGAAGAAGAAGGAATGAAGATGAGTGTTTTTTTTAGTTGGTCCTTAAATTGTTTTTTTTA GTTTTTTTTTGTCCTTGAAATCTTTTTTAGTTTAAATTTAATTAAAAAATGAAAAAAATGTCACGTGAGCTTTGACCGTC AAAAAATAGACGGAAGACGGACGGAGGGGTATGTTTTGCACCTTTCTGAAACATGTAGGTTACACTTCGCACTAAAAATT CACATGGGGTATGAATCGCAATTGGGTTAAACTTGAGGGGTATAAACTGCTTTTAAGCCCTTAATCTAATATGCCGTCAT TGCAGAACATTGTCTGCTGCATCCCGGAAATGTCCCCGCTAGGATTTCTTTTCTCTTTTTTTCTTTTCAATTCAAGCTTG TAATCTGATCAGTGAATGTAATATGTTTTAGTGATTTAAATTGTTTCCACAGGATATGTATTCAAACTTCATTGCCATAA TACTCTCCCAAAAAGAAAGCCAAGTTTGATACATTTTTATGTGAAGATCTAGTTGAGGAACAGGGAAAAAAAACTCCCAT CAGCGAAGTATAATTGTATATTATGAGAAAAAATTAGCTTCTTTGTGC
CDS sequence (LotjaGi3g1v0318600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTCTTCTGAGCATCATTCGGAAAATCAAAAGGAAAGAAAAGGAAATGCGAATCCTTATGGTTGGGTTGGACAATTC TGGCAAAACCACAATCGTTTTGAAGATTAATGGCGAGGACACTAGTGTCATCAGTCCTACCCTTGGCTTCAACATCAACA CCATCTCCTACCAAACTATCTCGCTGCGATCTTACTGGAGGAACTACTTTGAGCAAACAGATGGTTTGGTTTGGGTAGTT GACAGTTCCGATCTCAGAAGGTTGGATGACTGCAAAATGGAGCTAGATAACCTTCTAAAGGAAGAGCGGCTATCAGGATC ATCCTTACTGATACTAGCAAATAAACAGGACATTAGAGGCGCACTTACACCAGATGAGATAGCTAAGGTGCTGAACTTGG AAGCTATGGATAAATCTCGGCACTGGAATATAGTTGGCTGTAGTGCATACACTGGTGATGGTCTTCTTGAGGGATTTGAT TGGATGGTCCAAGACATAGCCTCTAGAATCTACATGCTCGACTAA
Protein sequence (LotjaGi3g1v0318600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGLLSIIRKIKRKEKEMRILMVGLDNSGKTTIVLKINGEDTSVISPTLGFNINTISYQTISLRSYWRNYFEQTDGLVWVV DSSDLRRLDDCKMELDNLLKEERLSGSSLLILANKQDIRGALTPDEIAKVLNLEAMDKSRHWNIVGCSAYTGDGLLEGFD WMVQDIASRIYMLD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 173 | 173 | 3.2E-86 | – | |
| SMART | 1 | 170 | 170 | 1.5E-38 | – | |
| PANTHER | 1 | 173 | 173 | 3.2E-86 | – | |
| SMART | 3 | 166 | 164 | 5.5E-16 | – | |
| Pfam | 4 | 166 | 163 | 2.2E-55 | ||
| ProSiteProfiles | 10 | 166 | 157 | 16.757 | – | |
| SUPERFAMILY | 13 | 168 | 156 | 1.97E-39 | ||
| Gene3D | 17 | 166 | 150 | 5.0E-46 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | GTP binding | Interacting selectively and non-covalently with GTP, guanosine triphosphate. |
Expression pattern of LotjaGi3g1v0318600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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