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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0318900 |
| Transcript ID | LotjaGi3g1v0318900.4 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | DNA-directed RNA polymerase subunit; TAIR: AT2G40030.1 nuclear RNA polymerase D1B; Swiss-Prot: sp|Q5D869|NRPE1_ARATH DNA-directed RNA polymerase V subunit 1; TrEMBL-Plants: tr|G7LG09|G7LG09_MEDTR DNA-directed RNA polymerase subunit; Found in the gene: LotjaGi3g1v0318900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:67678062..67686588) extracted from Lotus japonicus Gifu genome v1.2.
TTGAAAGTGATGGAGGATAATCCAACTTCAAGTGTTTTAGATGCGGAAGTAGTTGGGATTCGATTTGGTATGGCTACACG CCAGGAAATTGTAAGTACACAATGTGTTATAATTTTCTGTATAATTTTGTGACTATCAGATGCTGCTCCACAGAGGAGTT GAGCTCTTTGGTGATATGGCTCTAATGAGGTTAACTAGAATCTATTTTGGACAATGTCATTGTGATGAATGCCGAGGTGA TAGGAAATACTTATCAAATTTTAATGGTATTTTCTGCTGGATTGCTTTACGAACCTTATTTGGACTGTTATTTTCGTTTT TTATATTTCTTAAAATTCATTATGTCATAGTAAATGTACATCGTGATTGTTTTTTGGTTAAAAACTTCAAAATAAACTAA AAATGCACAATCATGTATTCTCTAGATACCATATTAGAATTGGTGCTCAAGGGAAAGAAAGAAAGAAACTGTGTATTTCA TTTCAGAATTGCTACTCATACAAGTGGGCTACCTAAGTATTTGCAGAAAGCTGAAGCTTCTATAAGATCTAACTAACTGA CTACAATCATCATTGTAAATAACTATATCTGTCAAACATGATTCATGACAGTTACAAACTAACTACGGCTGTCAACATAA CAACTGCAGAATTAAAACAGACTAACAGCATACAACAGAGCCTTCACTAAAGCTTGAAACCGAGACTAACTACATCTATT AATTGTAAATAAGTCTTACTATGATGTTATGGCCTATTTAATATTTTTTTGGATTCGGTCAATTTATTGAGAAGTTTCCC TTCTCTTTTGGTTGCTAGTGTACAGCATCGATAAGTGACTCCTCAATTAGTCATGCTAGTCAGCTGTCAAATCCATTCCT TGGGCTGCCCCTTGAATATGGAAGATGTGAATCTTGTGGTACTTCTGAAGCAGGAAAATGTGAAGGTCTGTTGTTTTCTT ATGTTTGGTATTGTCTTTCCAATGGTAGGAAAATGGTGTATTTCAGATGAACTAATGTTGTATCAAATCAATATTACTTT TCAGGCCACTTTGGATATATTGAGCTTCCAATTCCAATATATCATCCTAACCATGTTAGTGAATTGAAGCGGGTACTGAG CCTGATTTGCTTAAACTGCTTAAAAATGAAGAAAACCAAGGTATCGCTCAACTGGAATCTGAACTTGACATTCTTCAGAT TTTTGCCATGTCTATATAGTTTCTATGTCTTAAGTACGAAATCTGAAAGTGATTTAGTGGTGAGTTCTGTATTCTCACTT TAGAAATGCTAGCAACACACTCTTTTGAATACAAACATACTCCATGTGATTGGTTTATTTTTGAAAAGTCAACTCAGAAT TTTTTTTTTTTAAAACAGACAAATGTGTTCACTTTTTAAAAAATAAACCAATCACATGAAATGTGTTGGTACTTGGTAGT ACTCCACTTTCCCCCTTTTACGTATGCACTGAATTCTTTTTATTTGAAAGACCCAGGACCCGTTTGTGTATGCTTATTCT GGTACTTTTTTGTAACAAATTTGGCTAAGTTTAGTTGAAGTTTATGAAACAAATTTAGTACTCAAGTTGCAAAATGTCTT TTTATGCAAGTAGTCAAGAATTGATTTAGTAATCAATTGCAATATCAGCTGGTTTTACATGAAGCACATTTTCTGCCTAA ACTTTTTATTTCTATTATTATAATATTGCACAATATTTCTTTACAGAAAACTGTCTATACTATAGTACTTTAAATTCTTT ATGCTATTTGTGTGTTTGCTCTTACTGGCTCACAATATTTCAGTTTCCTTCTTCAAGCAGTGGTTTGGCACAGAGGTTAT TATCTCCCTGCTGTCAGGTTAGCATGAATCAATCATATAATATCCTTTTTCTAGTTGATATATTCTTGTCACTTAGTTTC ATTTTTGATTATTCATTATATATTAAAATGAATTAATTTTTTTTATAATAGTATCATGTATTAAGAACTGAGAGTATTTA AATAGCACCTGAGATGTGTGAAATTACGATGATAATAATATTCTTCTTATTTTCTGTAACATGCATGATCAAGTATATAG TTTCTCCTTGTTTAAGCTGTGGTAACATAATCCTGTACACTGGGTGTAGATTGCTACAAACATGTTGCTTGGATCTTTAG GTTATACTACGTCGGAGATGCAAATATTTAAATGCACTCCCTTATGATTAGAATTTTTCAAATTGGATTCTTTTCTAGCA GATGTTCCCTGGAGTTAGAGATCTTTGCTGTATTGAGTTTGTGTTCTTATGGTTGCATTGTCATTTTTCCTCCTTTCTTC TAGGGACTATTTGTTGTTACTTTTTGGTAATATTATTGTTTGTCAATAAATTTATTTATTTACAATTAAAAAATACTAAA GTCCCCAGGATGTGTACAAAATATGCATCAGCTTTCTCTCTGACTAAAATTTCCTTGAATGTGTTTTCTTCCTCTAGTTC TTTATTGTTGAACCTATGATACTATTTTCTTTTTAATGTCGAAAGATTGAAAATCTTCGAATTCCTAAAACCTCTAATGA AAATTTTCCCCTTTCATAAGAAAAAAAAAGCTGAAAAGGTTCTTTTGGATATCTGCTACAACATGGCAATTTTACTGCAT TTAATTACTCATTCATTCTGTTCAATTTCATGCTCATTACTATATAAAAGCTTTGATGAAGTGTTCATTAGTTTTTGAAT TATGTGAAATTTTGTAGACACCTTTTGTCATGGGTTCTTGTCTGATATGGTGAGTGTATTAGGTGAGATCATGCTCGAAT GGGAGAATTGTATATTTTTACCTTAATCCTAAAAGAAATATCAACATTAGATTTAAGTAAAATATGTTAGAATATAATAT AAAACCATTAAAGTGACCCTTACCCAACAACTTAAGCTTTTGGGAAGTGGTTATTTGATATGGTATCAGAGCCTCTATGG CCGAGAGGTCTAGAGTTCGATCCTTGCTCCCCTCACTTTCTAATTAAAAAGTGGAATTTGATTAAGCACATGGTAGGTGG GCTTGTGCATTTAACCACGCTTCAAGCCCAAGGGCTCTTGCGTGAGGGGGCGTGTTAGAATATAATATAAAGCCATTAAA GTGAACCTTACCCAACAGCTTAAGCTTTTGGGATAAGTGGTTATTTGACAAAATAATCTTAACTATCCATACATGGTTGT AGTGTAAATTACGTCTGCTCAATTCTCACTTATACTAAGTTTGGATGTGGGAAGAAGTATGGAGGAGCCGATTAGGATAA AAAGAAGTTGAGGGGAGGAAATGAGCAGTTTTTAGGTTGATAAGAAAGAAGTGGAAGAGAAGGAAAACTGTAATTTCCTT TCACTTGTTTGGCTCAATCTTAAAGTGAGAAATGAGAAAATGATATCTTGTTGTAAAGACTGTCTACCCTTGAAAAGGTT ATTTGATCTGCTGCAACTTATTTTGTGTTAAAACTCATTGTGAATTGTGATAGGGCAAAAAGGGAATGCAAAATTTTGTT GTTCAACAAAGTTGTTGCACTTGGGTGTTGGGCCTATTAGAGTTCTAGAGAGGGTGAGAGAGATGAAAACTCTGCAAAAA ATATGATTGTGTTTTATCTGAATCTGGCTGCTTGTGATACATGTATATGTGACACTTTTAAAAACCTGAGCTGGCCGGTC AGTGCTGGTCAAGTGAGCCATTTAACCCCAAAACTCAGTTGAATTCAGAACCGGTGAGGACTGGTTGAACTGGTATAAAA CTAGTTCCGAACGGCCTGATTTTTTATTTACATTTATTTTTATTTTTAAAATATTTGATAACTCAATAAAAGTCGAACGA CAAGTTAAAATGACCTGCATTTATGAATTTAATATTTAGACTTTTGTTATTGGTATTATCATACAAAATACTCCCTCTGT TCCACAAAGATTGTTGTTTTAGCATATTTTGATATATTTCTAATTTTTTCCACCTATACCCTCATTTAATAGTTTTTTTC TCTCAATTATCACCTTTCATATTATCAACCACAACTCTTTTCTATCAACTACATTCTTCTCTATACAAGGTAGAATTTAA TAGTTGCACATGGTATTAGTAAAACTAAATAAGGGTATTTTAGTAACATTGTACTATCAACAATTGTCATCTTACTATTT GTACCACAACCTTAAACAACAATCTTTGTGGAACGGAGGAGTATATAATATGATCATCCTATATTCATTTGAAATTTAAT TTCTTAAAATATTATGTTAATTTATTACTTAATAAATTACATAACATCTTTTCTATATCTATATATGTAATTATTACAGG TTTGACCATGGTTCAACCACAATTGAACTGTGAACCAGTACCTTTACTGGTTCAATGGTTTTTGAAACATTGGTATACGA TGCTGCTCCATGATGAGCAAGGCTTAACGGCCTGTAACTAACAACAGATGTAGCAGGACTCAACTAACTTCAGTTAAAGC TAACTAAATCTTAACTACTCTAAGTGATATATAATAGAGTGAGTTACACCATTACACCTAGCGCTATCCATGTACGGTCA TATTGTCAAGAGCAAGTCCTCTCATTTCTCACTGGATATTCCCGTTAGTCTATTAAATGATTGGTGCAAGGAGCTAATCT TGACCATATCATCGTATATGGTTGGTTGAGATTGGTTGAACTTAAATAATCTTGATCATTCATTTATGGACGTATTACGT AGGTATGTTGTGGGCGGGTGATGTTACTATGGAAATATCATATTTTGCATGTTCAATGCATGCTCCTAATCCTATGCAGG ATGTTGATCTTGAGTATGTTCTCTATATTGCAACCTTTCCAAATGGTGTTTGTTTCATTTGCTCTATTTTATGAATGTTT CATCTGAAGAACATGAAGAGATGTGAAAGCAATTTTTCCTTTTCTTGTGTTTTTTAAAGTTTTTTTTTTCCTTGGCTTGC TTAATAGTTGACTATTCTCTGCTTTGATTTTGCTGCTTTCTCTTATTTGTGATGAATTTAATGTTCAACTAGTTTTTCAT TATCTCCTGTCCAAGCTGAATGAGATTTTTGTTTCTTCCCTTTTAGGATGCTAATGCTGCACAAGTTTCTATACGGGAAG TCAAAACAGCCGATGGAGCTGGTTACTTAGTACTGAAAGTATCTAAGTCAAAGATGCATGATGGTTTTTGGAGGTTTCTA GACAAGTATGGCTATCGTTATGAGGGCGATCATACTCGAGCTTTGCTTCCTTGTGAGGTTTGGTTTCTACTGCTTTTCAT TGTTACTGTGTGTGCTTATAGTGGCTAGCCTCTTTTACATGTCTGGATATATGTTTCTAAATTAATTTATATTTGCAATC CCCTTTATTTTTTCCGCTTTCTCTATTTTTTGAGCTTCCATATTTTCTAATTTTCTCCCTTTCCTTTCTATATGTCCTCA TGACTGTCTATGTATATGTTCATTAAAATGTCACCTGGCAATCCACATAGAAGCCTCCTTGAAATTGAGTCATATAATTA TGATAACTGCATTTTTTTGGATCTGACATTATCATTAGCCTTGGTCATTTTTTTTCTTTAATTCAAGGATTTCTTTTAGC TGACCATAATATTGGTTCAGTCTCTATTAGTTGGAACACTTAATTTAGTTAGAGTGGGAGAGATGATAGGGTGTAACTGA TAAGAGGGAAATATTAGTAATTAGGTTTTGGATTTGAACTAGAGATTAAGCAGAGGCCCAAGACTTTCAATTTTCCTTGA ACTGTGAGAAACACCATTCCTGGTTATATAATAAAGTTCATCTCTTTTCTATCTGTTCTTTATTTCTTCCGTTGCCAATG AATGGTGAAGTGCACCTTTCAATTTACAGTTCTTTGTAATGGGATATATTATCGTGAGCATTTGATTTTCTTACTTTTTC TTGCAGCTGGAATTATTATTTGCATTTTCTATATGATTGAAATTTATACTTGTAACATTTTTGTTTGTGATTGGCTGTGT CAGAGGTCTATACTTGTGAATTGTAGTTATAATTGTTATATGTTTCATTGGGATCTTGTCGTTGGCTTTTAGTTTTTGAT TTATAATTTGCTCATTACATATCTAACAGGTGATGGAAATTATCAAGAGATTTCCCCTAGAAACCAAGAAAAAACTGGCT GGGAAAGGATATTTTCCTCAAGATGGATATGTGTTGAAGTATCTTCCTGTACCACCAAATTGCTTGTCTGTGCCTGTTGT TTCTGATGGCGTCAGTGTCATGTCTTCGGTGAGGAAATGATAAAGTGGTTGGTTTCTTTGTAAATCTATTGTATAGTGCT CTTGAATGTTACTCATCTTTCTTGCTTTGCAGGATCCTTCCATGACATTTCTGAGAAAATTGCTCAGGAAGGTTGAAATC ATCAGAAGTTCTAGATCTGGTGAACCAAACTTTGAGTCTCATGAAGTGGAAGCAAATGACTTACAGTCAGTGGTTGACCA GTATCTTCAAATTAGGGGCTGTGCTAAACCTGCCCGTGATATAGAAACACACTTCGGGGTCAATAAAGAGCTGAGTGATG CATCAAACAAAGCATGGCTTGATAAAATGAAAAGTCTATTTATAAGTAAGGGTTCAGGTTTTTCTTCAAGGAGTGTGATA ACTGGAGATGGGTACAAGAGGACAAATGAAGTAGGAATTCCGCTTGAAATTGCCCAGAGGATAACATTTGAAGAGAGAGT AAACTTGCATAACATGTGTTTTTTACAGAAGTTGGTTGATGAAAATTTGTGTCTCGCCTACAAGGAAGGTGTGTCAACAT ATTCACTGAGGGAGGGCTCAAAGGGGCACACATATCTTAAGCCTGGCCAGATAGTGCATAGAAGGATTATGGATGGGGAC ATCGTCTTCATTAACAGACCACCTACAACCCACAAACACTCATTACAAGCACTTGTGGTCTACATCCACGATGATCACAC GGTGAAGATAAATCCACTGATTTGTGGGCCTCTTGGAGCTGATTTTGATGGGGATTGTGTCCATTTATTTTATCCACAGT CACTTGCTGCTAAGGCTGAAGTAGTGGAATTATTCTCGGTGGAGAAACAGCTCCTCAGCTCTCACAGTGGTAATCTGAAC CTGCAATTATCCACAGATTCCTTATTGTCACTGAAGATGTTAGTGAAGAAAGGTTTTATGGATAGAGCAGCTGCTAATCA ATTGGCAATGTTTCTTTTCTTGCCTTTGCCACGACCTGCTTTGCTGAAGGCCGGTTCTGGTGATTCTTATTGGACATCCA TCCAAATTTTGCAGTGTGCTTTGCCTTTATCTTTTGATTGTACTGGGGGACGTTACTTGATTAGGCAGAGTGATATCTTA GAATTTGATTTGAGTAGGGATGTTCTTCCTGCAGTTATAAATGAAATAGCAGCGTCAGTGTTCTTTGGGAAGGGTCCTCA AGAGGCACTGAATTTCTTTGATGTGTTACAACCGGTTTTGATGGAAAGCATATTCAGTAATGGATTTAGCGTTGGCTTAC ATGATTTTTCAATATCTGGGGCCGTGAAAAGGGTTACAGACAGAAACATAGGGAAAGTTTCCCCGCTGTTGTATCAGTTG AGGTTTATATATAATGAGTTGGTGGCACAGCAATTAGAGAAGCACATGCAAGACATTGAACTTCCTGCTATAAAATTTGT TTCAAAATCATCCCGACTTGGGGATATGATTGATTCCAAAAGTAAATCAGCTCTTGATAAGGTGACACAACAGATAGGGT TCCTTGGGCAGCAACTCTTTGTGCGAGGGCGACTGTATTCCAAGGGGTTGTTGGAGGATGTTGCGTTACATTTTAAATTA AAATGTTACTATGATGGAGATGGTTATCCCTCAGCTGAATATGGATTACTCAAAGGTTGTTTTTTCCATGGTTTGGACCC ATTTGAAGAGTTAGTACATTCAATTTCCACAAGAGAGATAATGGTTCGCTCTTCAAGAGGATTGTCTGAACCTGGAACTT TATTTAAAAACTTGATGGCCATCCTTCGGGATGTTGTAGTTTGTTATGATGGAACTGTGCGAAATGTATGTAGTAATTCC ATCATTCAGTTTGAGTATGGGGTAAAAGCTGGAGACAAAACTCGGTACTTATTCCCTGCTGGTGAGCCTGTAGGTGTCTT GGCAGCAACATCAATGTCTAATCCTGCTTATAAGGCAGTCCTTGATGCTAGTCCTAGCAGCAGTTGTTCATGGGAATTGA TGAAGGTAATATTATTTTTTTCTTTGCAAATAATGGACATCTTTTTCTTCATATCTCAGGAATAGATTTTAGTGTCGAGT TTGTTAATCCACACATTTTATCTTCAGGAAATACTTCTCTGCAAAGTCAATTTTCGAAATGAACCAATTGACCGCCGAGT AATTTTGTACTTGAATGACTGCGATTGTGGAAGGAGGTATTGCCGAGAAAATGCAGCATATATAGTTAAAAATCAATTGA GAAAAGTCAGCCTGAAGGACACAGCTGTGGATTTCATTGTTGAGTAA
CDS sequence (LotjaGi3g1v0318900.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGGATAATCCAACTTCAAGTGTTTTAGATGCGGAAGTAGTTGGGATTCGATTTGGTATGGCTACACGCCAGGAAAT TTGTACAGCATCGATAAGTGACTCCTCAATTAGTCATGCTAGTCAGCTGTCAAATCCATTCCTTGGGCTGCCCCTTGAAT ATGGAAGATGTGAATCTTGTGGTACTTCTGAAGCAGGAAAATGTGAAGGCCACTTTGGATATATTGAGCTTCCAATTCCA ATATATCATCCTAACCATGTTAGTGAATTGAAGCGGGTACTGAGCCTGATTTGCTTAAACTGCTTAAAAATGAAGAAAAC CAAGTTTCCTTCTTCAAGCAGTGGTTTGGCACAGAGGTTATTATCTCCCTGCTGTCAGGATGCTAATGCTGCACAAGTTT CTATACGGGAAGTCAAAACAGCCGATGGAGCTGGTTACTTAGTACTGAAAGTATCTAAGTCAAAGATGCATGATGGTTTT TGGAGGTTTCTAGACAAGTATGGCTATCGTTATGAGGGCGATCATACTCGAGCTTTGCTTCCTTGTGAGGTGATGGAAAT TATCAAGAGATTTCCCCTAGAAACCAAGAAAAAACTGGCTGGGAAAGGATATTTTCCTCAAGATGGATATGTGTTGAAGT ATCTTCCTGTACCACCAAATTGCTTGTCTGTGCCTGTTGTTTCTGATGGCGTCAGTGTCATGTCTTCGGATCCTTCCATG ACATTTCTGAGAAAATTGCTCAGGAAGGTTGAAATCATCAGAAGTTCTAGATCTGGTGAACCAAACTTTGAGTCTCATGA AGTGGAAGCAAATGACTTACAGTCAGTGGTTGACCAGTATCTTCAAATTAGGGGCTGTGCTAAACCTGCCCGTGATATAG AAACACACTTCGGGGTCAATAAAGAGCTGAGTGATGCATCAAACAAAGCATGGCTTGATAAAATGAAAAGTCTATTTATA AGTAAGGGTTCAGGTTTTTCTTCAAGGAGTGTGATAACTGGAGATGGGTACAAGAGGACAAATGAAGTAGGAATTCCGCT TGAAATTGCCCAGAGGATAACATTTGAAGAGAGAGTAAACTTGCATAACATGTGTTTTTTACAGAAGTTGGTTGATGAAA ATTTGTGTCTCGCCTACAAGGAAGGTGTGTCAACATATTCACTGAGGGAGGGCTCAAAGGGGCACACATATCTTAAGCCT GGCCAGATAGTGCATAGAAGGATTATGGATGGGGACATCGTCTTCATTAACAGACCACCTACAACCCACAAACACTCATT ACAAGCACTTGTGGTCTACATCCACGATGATCACACGGTGAAGATAAATCCACTGATTTGTGGGCCTCTTGGAGCTGATT TTGATGGGGATTGTGTCCATTTATTTTATCCACAGTCACTTGCTGCTAAGGCTGAAGTAGTGGAATTATTCTCGGTGGAG AAACAGCTCCTCAGCTCTCACAGTGGTAATCTGAACCTGCAATTATCCACAGATTCCTTATTGTCACTGAAGATGTTAGT GAAGAAAGGTTTTATGGATAGAGCAGCTGCTAATCAATTGGCAATGTTTCTTTTCTTGCCTTTGCCACGACCTGCTTTGC TGAAGGCCGGTTCTGGTGATTCTTATTGGACATCCATCCAAATTTTGCAGTGTGCTTTGCCTTTATCTTTTGATTGTACT GGGGGACGTTACTTGATTAGGCAGAGTGATATCTTAGAATTTGATTTGAGTAGGGATGTTCTTCCTGCAGTTATAAATGA AATAGCAGCGTCAGTGTTCTTTGGGAAGGGTCCTCAAGAGGCACTGAATTTCTTTGATGTGTTACAACCGGTTTTGATGG AAAGCATATTCAGTAATGGATTTAGCGTTGGCTTACATGATTTTTCAATATCTGGGGCCGTGAAAAGGGTTACAGACAGA AACATAGGGAAAGTTTCCCCGCTGTTGTATCAGTTGAGGTTTATATATAATGAGTTGGTGGCACAGCAATTAGAGAAGCA CATGCAAGACATTGAACTTCCTGCTATAAAATTTGTTTCAAAATCATCCCGACTTGGGGATATGATTGATTCCAAAAGTA AATCAGCTCTTGATAAGGTGACACAACAGATAGGGTTCCTTGGGCAGCAACTCTTTGTGCGAGGGCGACTGTATTCCAAG GGGTTGTTGGAGGATGTTGCGTTACATTTTAAATTAAAATGTTACTATGATGGAGATGGTTATCCCTCAGCTGAATATGG ATTACTCAAAGGTTGTTTTTTCCATGGTTTGGACCCATTTGAAGAGTTAGTACATTCAATTTCCACAAGAGAGATAATGG TTCGCTCTTCAAGAGGATTGTCTGAACCTGGAACTTTATTTAAAAACTTGATGGCCATCCTTCGGGATGTTGTAGTTTGT TATGATGGAACTGTGCGAAATGTATGTAGTAATTCCATCATTCAGTTTGAGTATGGGGTAAAAGCTGGAGACAAAACTCG GTACTTATTCCCTGCTGGTGAGCCTGTAGGTGTCTTGGCAGCAACATCAATGTCTAATCCTGCTTATAAGGCAGTCCTTG ATGCTAGTCCTAGCAGCAGTTGTTCATGGGAATTGATGAAGGAAATACTTCTCTGCAAAGTCAATTTTCGAAATGAACCA ATTGACCGCCGAGTAATTTTGTACTTGAATGACTGCGATTGTGGAAGGAGGTATTGCCGAGAAAATGCAGCATATATAGT TAAAAATCAATTGAGAAAAGTCAGCCTGAAGGACACAGCTGTGGATTTCATTGTTGAGTAA
Protein sequence (LotjaGi3g1v0318900.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEDNPTSSVLDAEVVGIRFGMATRQEICTASISDSSISHASQLSNPFLGLPLEYGRCESCGTSEAGKCEGHFGYIELPIP IYHPNHVSELKRVLSLICLNCLKMKKTKFPSSSSGLAQRLLSPCCQDANAAQVSIREVKTADGAGYLVLKVSKSKMHDGF WRFLDKYGYRYEGDHTRALLPCEVMEIIKRFPLETKKKLAGKGYFPQDGYVLKYLPVPPNCLSVPVVSDGVSVMSSDPSM TFLRKLLRKVEIIRSSRSGEPNFESHEVEANDLQSVVDQYLQIRGCAKPARDIETHFGVNKELSDASNKAWLDKMKSLFI SKGSGFSSRSVITGDGYKRTNEVGIPLEIAQRITFEERVNLHNMCFLQKLVDENLCLAYKEGVSTYSLREGSKGHTYLKP GQIVHRRIMDGDIVFINRPPTTHKHSLQALVVYIHDDHTVKINPLICGPLGADFDGDCVHLFYPQSLAAKAEVVELFSVE KQLLSSHSGNLNLQLSTDSLLSLKMLVKKGFMDRAAANQLAMFLFLPLPRPALLKAGSGDSYWTSIQILQCALPLSFDCT GGRYLIRQSDILEFDLSRDVLPAVINEIAASVFFGKGPQEALNFFDVLQPVLMESIFSNGFSVGLHDFSISGAVKRVTDR NIGKVSPLLYQLRFIYNELVAQQLEKHMQDIELPAIKFVSKSSRLGDMIDSKSKSALDKVTQQIGFLGQQLFVRGRLYSK GLLEDVALHFKLKCYYDGDGYPSAEYGLLKGCFFHGLDPFEELVHSISTREIMVRSSRGLSEPGTLFKNLMAILRDVVVC YDGTVRNVCSNSIIQFEYGVKAGDKTRYLFPAGEPVGVLAATSMSNPAYKAVLDASPSSSCSWELMKEILLCKVNFRNEP IDRRVILYLNDCDCGRRYCRENAAYIVKNQLRKVSLKDTAVDFIVE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 2 | 926 | 925 | 0.0 | – | |
| PANTHER | 2 | 926 | 925 | 0.0 | – | |
| Gene3D | 4 | 111 | 108 | 1.4E-7 | – | |
| SUPERFAMILY | 13 | 854 | 842 | 1.3E-147 | – | |
| Pfam | 40 | 281 | 242 | 1.8E-12 | ||
| SMART | 208 | 507 | 300 | 9.8E-50 | ||
| Pfam | 325 | 478 | 154 | 1.2E-32 | ||
| Gene3D | 326 | 473 | 148 | 5.7E-40 | – | |
| Gene3D | 353 | 408 | 56 | 5.7E-40 | – | |
| Pfam | 482 | 627 | 146 | 1.0E-8 | ||
| Pfam | 756 | 848 | 93 | 3.2E-7 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). | ||
| Molecular function | DNA-directed 5'-3' RNA polymerase activity | Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template, i.e. the catalysis of DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo'. | ||
| Biological process | Transcription, DNA-templated | The cellular synthesis of RNA on a template of DNA. |
Expression pattern of LotjaGi3g1v0318900.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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