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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0328900 |
| Transcript ID | LotjaGi3g1v0328900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Pectinesterase; TAIR: AT5G51490.1 Plant invertase/pectin methylesterase inhibitor superfamily; Swiss-Prot: sp|Q9FHN5|PME59_ARATH Probable pectinesterase/pectinesterase inhibitor 59; TrEMBL-Plants: tr|A0A1J7GRS1|A0A1J7GRS1_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0328900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:69623746..69628545) extracted from Lotus japonicus Gifu genome v1.2.
GGGTAGAAAAGGGTTAAACAAAACATTTTTTGTTTAACCATTGTATATGGTCTAACTAGGATAAAATACAATCCAAACAA AATAAAAATACAAAAATAATCCTCAAACCCTGATCTTAAAATAAAGGTTTTAAACAAATAACTTATAAACTCTCAAGAGT TTTCCCAGCTAGCTTTGATTTAGACCATAGTCCCCTCAAGCTCTCCAAAGCTTCCAAATCATCATTGGGAACACATGTTC AACAAGAAAGAAAGCAACCTACCAATATCATTACCAAGACACCAATATAAAAATGAAAACCATTATGTTGGAACGCTTAC ACACATCAATATGTTAGCACTGTCATCAAGATCATGTTTTGTCAAAATCATTCATATTTTCCTACTGTTGTTTATTCTGC AAGCTACTAGCACATGGGTTTCCCTAAAATTTCAAATATGCTTGAACAAAACGCATACGCGTACAAGCTTACCAGGTGAA AATGGCGTTCAAAGGAACTTTTCCTTCACCTATGCTTGAAGAAGTCTGCTCAAAGCAAAGATAATATATACAATTTTCTT TAACAGCATCATACATGCATCTGAAACAACAACACAATTAACTTCAGCAAAACTCAAGGATTTTAATTCCTCAAAATCTT TGTTCAATTGTGTGTTCTGATAGTTAGCCGTCACCGATCAGTGCATTGATAACTAAGGAAGCTTCAGGTATTGTTGCTGT GTGATCACAAAACACTTGTTCCTGCAATTAATTACAATTAGACTTCTAACTAGCTGCTATCTTGAGATATTAAGCAAGCT CACTTGCAAATTGAAGCAATCAATAAGTAATATTATTTTTTCTATCTGATAAGATTTTATTCCTCTTTAATTCTTTCTTG CAATTGCATTCATGTCTTGTATCTGTGTCATTCTCATCATCATTTTCAATTTAATAAGCCCACACACGTTTTTGGCCTCT GCAGTAGTCCACCAAAGAAATGTATATATATAGCTGCTTAGCATACAAAACCAATTAACAAACAAAAAACATCATACATA GATTGGTGGTGCAACTCAACTCAACTCAACTCTTATTATTGTTTCTCTCTTATTCTTTTTCTAAACTACAAAGTGCAATT ATGGGAAATATATTCCTCACACTCTTATTGTTATCTTCAATTTTCTCAATAGCCTCATCCAGAAGAGGTCCTTCCTCCAG CAACATAGATTGGTGGTGCAAACTAACCCCACACCCTGAACCTTGCAAGCACTACATTACTCAAATCAACCCCCATTCCA AAATCAAACACAAAAATGAATTCCGGGGAATGCTTGTACATTTGGCATTAAAACTAGCACTTGGCATGCAAAGGGAAGCA CATGTTACTCTACAAAACATGGAGACAAAGAAACACAGAACTGTACATGGTGATTGTTTGAAGCTGTATGGAAACACCAT CTTTCATCTCAATCGCACCCATCACAGCCTTCATCTGGAGAAAGGGTCTTCACCAGATGATACACAGACTTGGCTCGCAA CATCTCTCACAAATATCAGAACATGTGGAACAGGGGCTGTGGAACTCAATGCTCAAGATTTCATGTTTCCAACAGAGAGC AGCAATGTCACTCAGATGATAAGGAACGGCTTAGCCATCAATGCGGATTTCATGAAATATAAAGAATCAGCGGCTAAAAA TTACACCTCGGAAACAGAAAGAACGTTTCCCAATTGGTTTTCCGGGCATGAGAGGAAACTGTTGCAGTCTTCTTCCGTAA AGGCAAATTATGTGGTGGCAAAAGATGGTTCAGGAAACTTCAAGACTGTCCAAGGTGCTCTGAATGCAGCTGCGAAGAGA AGATATAAAACAAGGTTTGTGATACATGTGAGGAAAGGGGTGTATAGAGAGAATATTGAGGTTGCTGTGAAGAATGATAA CATCATGCTTGTTGGTGATGGGATGAAAAACACCATAATTACCAGTGGCAGAAGTGTTCAAGCAGGTTATACTACGTATA GCTCAGCCACAGCAGGTGAGAGATGTTCCAACACCTTTCTATTTCAATTTTCACAATTACTTGCTTGAGTTATTATTTTT TGTCACTACATAGTTTTTATCCATGGCCCTAGCCTCACCACATCTTCCCTAACTACTAGTTTGAGTTCTCTCTCTTTTGA ATAGAGGGTTTTAAGGAGGATACAAAATTCAATTATGAATCATAGAAGTTCATACAAAAATGATTATTCTTTTAGAATCA ATTGCATAACGATTTCTAAACATATTCAAAAAAAAAATGCAGGCATAGATGGACTCCACTTCATTGCACGTGATATTACC TTCCAAAACATTGCGGGTCCTCAAAAGGGTCAAGCTGTAGCGCTCCGATCAGCCTCAGACCTCTCAGTCTTCTACCGATG TGCCATTTTAGGTTATCAAGACACCCTCATGGTTCACGCACAACGCCAATTTTATAAACAATGCCAAATATATGGTACTG TGGACTTAATATTTGGCAATGCCGCCGTGGTTTTTCAGAACTGCAAGATTTTCGCAAAAAAGCCTTTAGATGGCCAAGCA AACATGATCACGGCTCAAGGACGAGATGACCCATTCCAGAACACTGGAATCACCATCCACAATTCTGAAATCAGGGCAGC ACCGGACCTCAAGCCTGTCGTTAACAAGCACAACACCTTCTTGGGCAGGCCCTGGCAGCAGTACTCAAGAGTGGTGGTCT TGAAAACTTTCATGGACACCTTGGTGAGCCCGTTGGGATGGTCTTCGTGGGATGATACTGATTTTGCTCTTGACACTTTG TATTATGGAGAGTATGAGAACTCTGGACCTGGTTCGTCGGTGACAAATAGAGTACAATGGCCTGGGTTTCATGTGATAAC AAGTCCAGCTGAAGCTTCACGGTTCACCGTTAATGGACTTCTTACGGGCTCCATGTGGTTACCTGAAACAACTGTGCCAT TTACCTCTGGTCTTTGATCTCTGCGTTATAACCACTACCTCAAAAAAACTACCACTTTACTATGACAATTACATTTAATT ATTTGAAATTGTTTAGATGTAGTTATTGTAAAGAACATGTACAATATTCTTTTGTACATAGCGAGTGTAATTATCCATGT CTTTGTGTGTATTAATTTTTTTTTTTTTGAAAGCAGAACTCCTGACAAAACTTGAGAACAAACTCTCTCAAGTGAGTAAT ATGTAGAACAGAACTCCTGACAAAACTAAAAGCTTGATATACTAAGAGTCACCCACCATTATAAATCCTGACAAAACTAA AAGCTTGTAATACCAGAACTCCCCAAAAATTCAAACCATACCAATTTTTTTGACAATATATACCTAACCCCACCAACAGA TTGTAAAAGAGACACCACCAACATCTCTAGGATAGACACTCCATGTAATTTAGATTACAACTTAAGTTCTACAAATCATG TCTTAGGTATTCAAACAACAAAGCCACAAACATAGATATCATCTTGTTCGGCCTTAAACTAAAACCCCATAGGATTCCAC TGGCATTCCAAGGATTGAAGAACTACAACACAGTTCATACTCCTTAACAATACATCCTAATTTTAAGGTCATGATACTCC AAAGTTCCTAAGAATATCAAAACAACCAATAGCAGAAAATCCAATTTCCAAGTCTCTCAAAATAACCAATTGGACTAAAC CACAAATGAACCATAACATTCTCTTTAGCGCGAAATCGAGATCTTCAACTTAGTTTCAATATGCCTACTTCGATTGAATT CTTACTTTAACAAGTAGCCCAAAAACTCAAAACCAACTCTTCCCATGGGTCAAATCACATACTTAACAATAATCACATTG AGTCTATCATGTATTTAAGTATTATCAATATCTCGAAACTAAACCTCAAAATTGCGTCTTGATGACTCACATAGATCAAT GCCAAAAAAGAATCAAAATAATGAACTCCAAACCTTACATGTAATTCAGATTACAACTTAAGGTCTACAAATCGCTTCAT AGGTATTCAAACCACTAAGCCACAAACATCGATATCATCTTGTTCAGCCTTAAACTTAAACCCCATAGTAATCCACTATT GCATCCCAAGGATTGAAGAACTACAACTCAGTTTACACTCCTTAACAATATATTCTAATTTTAAGTTCATGATACTCCCA AGTCTCTCAACATAATAAATTGGACTAAACCACAAATGAATCATAACATTATCTTTAGCGCGTAACCGAAACCTTCAACT TAGTTTCAATATGCCTACTTGGATTGAATTCTTACTTTAACAAATAGCCCAATAACTCACTCATCTCTTCCCATTGGTCA AATCACACACTTAACAATAATCACATTAAGTCTATCATGTATGAAGAACCTTATAATGTTATAAGACTAACCCCTTCTAT TTTTTGGTATATGCTTAAACTCAACCTCGTGTCAGTGTTTGGTGGTAACTATCCCCTAAAAGTCTAAAGTCTACGGTTAT AACTTAATAAAAAATTCAAAAACAAAAGCAATTAACTTCCCAATACAGTCAACAAGAATGAACTTCAACATTAATAAGCA AAGAAAAATAAAAAATAAAAGCAATTAACATCCCAATATATTCAATTAAAAATGAACGTCAATAATTAAAAAGCAAAAAA AAAAGTGTATTGAGTGCACTCACCTTGTTCAGGTGTGAAATTGGAAGTGGTATTCTTATGAATCAAATTTGGTGACATCA CGCAAGATCCCAGTCTAATGAACTGCCAATAGAAAAATTATATTAACATAGAATTCCAAAGGAAAACAAACGGAAAATTA
CDS sequence (LotjaGi3g1v0328900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGAAATATATTCCTCACACTCTTATTGTTATCTTCAATTTTCTCAATAGCCTCATCCAGAAGAGGTCCTTCCTCCAG CAACATAGATTGGTGGTGCAAACTAACCCCACACCCTGAACCTTGCAAGCACTACATTACTCAAATCAACCCCCATTCCA AAATCAAACACAAAAATGAATTCCGGGGAATGCTTGTACATTTGGCATTAAAACTAGCACTTGGCATGCAAAGGGAAGCA CATGTTACTCTACAAAACATGGAGACAAAGAAACACAGAACTGTACATGGTGATTGTTTGAAGCTGTATGGAAACACCAT CTTTCATCTCAATCGCACCCATCACAGCCTTCATCTGGAGAAAGGGTCTTCACCAGATGATACACAGACTTGGCTCGCAA CATCTCTCACAAATATCAGAACATGTGGAACAGGGGCTGTGGAACTCAATGCTCAAGATTTCATGTTTCCAACAGAGAGC AGCAATGTCACTCAGATGATAAGGAACGGCTTAGCCATCAATGCGGATTTCATGAAATATAAAGAATCAGCGGCTAAAAA TTACACCTCGGAAACAGAAAGAACGTTTCCCAATTGGTTTTCCGGGCATGAGAGGAAACTGTTGCAGTCTTCTTCCGTAA AGGCAAATTATGTGGTGGCAAAAGATGGTTCAGGAAACTTCAAGACTGTCCAAGGTGCTCTGAATGCAGCTGCGAAGAGA AGATATAAAACAAGGTTTGTGATACATGTGAGGAAAGGGGTGTATAGAGAGAATATTGAGGTTGCTGTGAAGAATGATAA CATCATGCTTGTTGGTGATGGGATGAAAAACACCATAATTACCAGTGGCAGAAGTGTTCAAGCAGGTTATACTACGTATA GCTCAGCCACAGCAGGCATAGATGGACTCCACTTCATTGCACGTGATATTACCTTCCAAAACATTGCGGGTCCTCAAAAG GGTCAAGCTGTAGCGCTCCGATCAGCCTCAGACCTCTCAGTCTTCTACCGATGTGCCATTTTAGGTTATCAAGACACCCT CATGGTTCACGCACAACGCCAATTTTATAAACAATGCCAAATATATGGTACTGTGGACTTAATATTTGGCAATGCCGCCG TGGTTTTTCAGAACTGCAAGATTTTCGCAAAAAAGCCTTTAGATGGCCAAGCAAACATGATCACGGCTCAAGGACGAGAT GACCCATTCCAGAACACTGGAATCACCATCCACAATTCTGAAATCAGGGCAGCACCGGACCTCAAGCCTGTCGTTAACAA GCACAACACCTTCTTGGGCAGGCCCTGGCAGCAGTACTCAAGAGTGGTGGTCTTGAAAACTTTCATGGACACCTTGGTGA GCCCGTTGGGATGGTCTTCGTGGGATGATACTGATTTTGCTCTTGACACTTTGTATTATGGAGAGTATGAGAACTCTGGA CCTGGTTCGTCGGTGACAAATAGAGTACAATGGCCTGGGTTTCATGTGATAACAAGTCCAGCTGAAGCTTCACGGTTCAC CGTTAATGGACTTCTTACGGGCTCCATGTGGTTACCTGAAACAACTGTGCCATTTACCTCTGGTCTTTGA
Protein sequence (LotjaGi3g1v0328900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGNIFLTLLLLSSIFSIASSRRGPSSSNIDWWCKLTPHPEPCKHYITQINPHSKIKHKNEFRGMLVHLALKLALGMQREA HVTLQNMETKKHRTVHGDCLKLYGNTIFHLNRTHHSLHLEKGSSPDDTQTWLATSLTNIRTCGTGAVELNAQDFMFPTES SNVTQMIRNGLAINADFMKYKESAAKNYTSETERTFPNWFSGHERKLLQSSSVKANYVVAKDGSGNFKTVQGALNAAAKR RYKTRFVIHVRKGVYRENIEVAVKNDNIMLVGDGMKNTIITSGRSVQAGYTTYSSATAGIDGLHFIARDITFQNIAGPQK GQAVALRSASDLSVFYRCAILGYQDTLMVHAQRQFYKQCQIYGTVDLIFGNAAVVFQNCKIFAKKPLDGQANMITAQGRD DPFQNTGITIHNSEIRAAPDLKPVVNKHNTFLGRPWQQYSRVVVLKTFMDTLVSPLGWSSWDDTDFALDTLYYGEYENSG PGSSVTNRVQWPGFHVITSPAEASRFTVNGLLTGSMWLPETTVPFTSGL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_EUK | 1 | 20 | 20 | - | – | |
| Phobius | 1 | 3 | 3 | - | – | |
| PANTHER | 1 | 529 | 529 | 1.5E-285 | – | |
| PANTHER | 1 | 529 | 529 | 1.5E-285 | – | |
| Phobius | 1 | 20 | 20 | - | – | |
| SignalP_GRAM_NEGATIVE | 1 | 18 | 18 | - | – | |
| Phobius | 4 | 15 | 12 | - | – | |
| TIGRFAM | 4 | 175 | 172 | 4.2E-17 | ||
| Phobius | 16 | 20 | 5 | - | – | |
| Phobius | 21 | 529 | 509 | - | – | |
| SMART | 24 | 173 | 150 | 2.1E-15 | ||
| Gene3D | 25 | 178 | 154 | 1.7E-8 | ||
| SUPERFAMILY | 27 | 177 | 151 | 5.62E-19 | ||
| Pfam | 28 | 173 | 146 | 4.3E-17 | ||
| CDD | 31 | 179 | 149 | 2.03472E-19 | – | |
| Gene3D | 209 | 529 | 321 | 1.2E-123 | ||
| SUPERFAMILY | 212 | 528 | 317 | 1.43E-103 | ||
| Pfam | 217 | 514 | 298 | 2.2E-132 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Enzyme inhibitor activity | Binds to and stops, prevents or reduces the activity of an enzyme. | ||
| Molecular function | Pectinesterase activity | Catalysis of the reaction: pectin + n H2O = n methanol + pectate. | ||
| Biological process | Cell wall modification | The series of events leading to chemical and structural alterations of an existing cell wall that can result in loosening, increased extensibility or disassembly. |
Expression pattern of LotjaGi3g1v0328900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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