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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0334900 |
| Transcript ID | LotjaGi3g1v0334900.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Cytoplasmic membrane protein; TAIR: AT1G33490.1 E3 ubiquitin-protein ligase; Swiss-Prot: sp|Q00534|CDK6_HUMAN Cyclin-dependent kinase 6; TrEMBL-Plants: tr|I3SS18|I3SS18_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0334900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:70477493..70486971) extracted from Lotus japonicus Gifu genome v1.2.
TAGTGTGCAATCCAATCCATGTAATCATCCAAATTGGTTGCACGTGGATGGTGGCGGTGGCAAATGGCAATGCCTTTCTT TGTCTACTGTTCCTTTAACCTTGACATCAAATTCATACTACCCAATAATCCAATCAAAGATTCTCTGTTTCTTTCTTTGT TTTCCATAATAATCAATCAACTATAGTTCTAAAATTCTTTTATGCACCACAATAATACTATATAATTATTCAGAGTTGGG GTTTCTTGTGGTGAGAGAAAAACTCTGATTCTGATCTCAATTTACTGGACTACCCTTCAGAGTTGAATGTTAAAGTTCTA AACTTTGCCCAAAGATGGCGATTGGGAAGATGGGAATAACCGATTGGTTCCACAGGAAGATCACTGATCCCCTTCTTTCC ATTATTCGCCGGTAAAGTTCTAACCTTTTCACTTTTTTAGCTCTGATCTACTATTCTTTTGTTGTTAATCACTGTTAGCT GTGATGATTCATCTGCAAAATTTAATTTTTTTTTTCTTTAGCTTTGGTTTTCCAGTGCAAAGATCTGTTTCAAAAGTCTC CAATGGTTAGCTTTTTGAAGTCTGTTCTTCATTTCAATTACCCTTTAAATAAATTTGGAATTTGAAGTATAATTTATTGG GTATATGGTGTAAAGAAAGAGAAAAAAAAAGTTATTGTAGCTAACAACTTATTGATGTTAGTTTTGTTCCCAAGTTGTTG CTGTTGTTGTATCTGTAGTGTTATTTATTTTCTTCATTTTTTGGGCAGCCATGTGTGTTCTTATGCTGAAAAGTAAAATA TGAAATGGGTTTTTATGGAACAGAAGTTGTCATGTTTTGGAATGAGTTGTTTTCATTAGGCTTCTAAAGAGTAAAGACTG ATGTGGTTAGATAAATTTGCTATTTTTTTTTCAGAGGAGCTGAGCCTAACCAGTTGGCTTTTTCTGCTGCTCTTGGCATT ACATTTGGAGTATTTCCTATATGTGGTATGTTGTAACTAACCCACTTTGAATTATATTGTCATTTATGTTAGGAATCCAT TCCAATGAAGCAGAGGATCTTTATATTCATCATGTTGTCAGTTGTGTACTTGAATTTCTACTCTTGGAACTGAGATCTTA TTGATTTCACACATGTTGATTGAATATTATACTCTTTGATGTCCAGCATATATGCTCAACAATTTACAAATTTCAATTGA TTTTCCCAAGTTTTAATGGGGATACATGTGTCACAATAGTGGAGAGTGGAGACCCTTTACCTTTACATTGTCTTTGAATG AAATGAAGAGTTGAAGAAACTGTGAACAACTTCTACAACAACAACCAAGCCTTTTACAGTGTTACCAATTACCAATAAGT GGTGTCAGCTACCTAGATCATACACTTTCATAATGTCCTGTCATTTATTAAGTTTAAAGATAAACCATTGACCTCTAAAT CTTTCTTAATTGATAAGTATGATTATAAGTTGAACATGTAAAATGCCCTAAACTTAGCCACGCTTACAGGCTTGGTCTAT TTCCCAATTATGAAAATTGATTGCTCCTTGGACTACTGCCTTTCTTTGTCAGAATTTTCCTTAAAAGTGATTTCCACCAG ATTACTGTCTTCATTCATCCTGATTACCGTCTTTGATTAGGTTTTCAGTTTGCTCTCTCACATCATTCATATGTTTTCTA TGAGGTTTGAACTTTGAACTGTCAATTTTCAGTTAACTAGTCTTGCATAACCATATCTAGGTAACCATGGTTTAGTATTG GTAGCCATCTAGCTAACATAAGCTCAAAACCGTATCTCATTTAATATGGATGAGCAACTTCGTATTTAAATTAAATCTAA ACCGAGTTAATTTACCAAACCAAATGCATCACCAAACATTCAAAAGAAGGAAAGTACGCTGTTGATTAGATATCTGAGAA AGCATACTGACATGAAATGCAGCAGTTCTTCTACAATTTGTTAAACATGCTAATGTTTCTTAAATAGGTGTCACTGTATT CCTCTGTGCAATGGCTATTGCATTGCTTGGATCATATTGCCATGCTCCAACTGTGATGCTTGCTAACTTTGTTGCTACGC CAATAGAGTTGAGGTAATATGCATTCAATGCTATCCATGCATCTTACTTTCTATCTCTATTCTCTAATTCTCTATGATGA ATGTTTGTACTTGTACTTTGTTGATCATGTTACAATCAAGATATTTTGTGCAAATATATTGTAAAGTACTTCTTTATGGC TCAATCTTTGTTAGGAGGGAGTCTTTTTTTTTTTCCTTTTAAATTTGTCACGGAAAACATATATTTTCCAATCAAGGTGT GTCAGAGAGGCTCCTGATAAGTGTATCAAACGGTCTTGATTGGTCCATGTAGCCAACCTTTTCTAGTGGAATAGGGTTTG AATATTGATGTTGCATCCTAGGAGTTCAGAGTTAAGGAGATTTGGACAATTAGTATGGTGTTAATTGGGTTAGTACGGAA AGAATGTTTATACTTTTAAGAAAGAGTTTCTCATAGGAAATCCATTCTGCATCAATTTTATTGTGCAAGTTGTGAGCCCT TAAAAACAATGAGAACATGCATAAATTTTTAATTATGCTCATATGTCTTTTCATGCCCCTATTTTCTCTTGTGATAGACA TTTATGTTCTTTTACTTATTTACACGGAAATGTTGTTTTGTTTCATAATTGGTTAGATTACATGTGCATTTCTATGTTGA TATTATTCTAGTGGGCATCAGCAGCATTGATATTGCTAATTAAAGATTTATTTGAAATTTCAGTCTGGTTGTACCCTTTC TACGCTTTGGTGAAGTTATCTCTGGTGGACCTCATTTCCCTTTGACATCTGATGCTTTAAAGAAAGTTTTTACTGGTCAA GCTTCACGTGAAGTCTTATTAAGTGTTGCCCATGCGGTAGGTACCATGTTCCATAGTATTTTCTTATATGCATTTATCTG AAGAAGACTGATCGTTCTGTGCATATAGATGTGTACATGAAATATAAAATCAAAACATCCATTTCTTTCTCCTTTTCCTA GATCTGCCTTTTCACGCAAGTTAAAGTTTGAGCTTTTAAGTCCTTCTCTGCCTTCCCTGGATTGAGGAATGGTGTTAAAA ATGGAGAGTGAACCTTTTTCCCAGGTTCTTTTTTAAATAGTAGTTACTCCAATGGGGAGTCACAGAGGAGGCAATCTGAT GCCGGACAAGCCAAGTACTGATTACGTTGATGTGTTGGGATGACAGAGTAGTTGGGGAAAAAACAGGGTAGAGGGTGAAG AGTCTGGAGACAATGAGAAAGGACATCTCAAATAATGAGAAAAAACAAGTGAAAACATGATTATAATTCACTTTTCAAAC TGAAATATTGATGGCATATTGAAGTTATGATTTAGGCAACAAAAACTGCAATTCTAAAGGCATAATCATGTCAATATTCT GGTTTAATCATCTCAGCATAACAAAAACGTTATAAACTATAGTTGCGTAGGGTTATTAGGATTTAATATGGTCTTTTAGT TTAAATTAAATTTACTTTCAATCTTAGTGAGTTTTTGTTTTGTATGCCATTCCCTTGTTAAGTTCTATATCCGTGGTTGT GTCTGTTATTTAGTTGGTAATAAATTTTGTTTTATTGCTTAGATTTTTCTGATGGATTTAGTATTAGTAAAAAGTCTCAA TCCTTACAGAATTAGGAGTTTGTAATTCTGTTCCCATCTGGTGCGTCGTAAGTGAGGTTGATTCAAACCTTTTCATTTTT ACGAGTTAAGTGAGTTGATATGTCTTGCTTGTATCATATGGTGATGCTTAAGAAACACTTTTGTTTAAGTCTAGGTTAAT ATAAATAATTTCTTCTCAACTTATAGTATATGTCTTCAAATTTTTATCCCTGCCCGGACTTGCTTCTGTCAACTTCATTT ACGATTTCTCTTTAAAATCTCTATCTTCTTCTTTGTTGAGTCTCTAGAACCCCTTATAGATAATACCTAGTTACCTACTA TCACTGCAGGTACTATTCAATGCACTCAAACGGGCAATATTTTATTTATGCGTTATATAAGCATTTTCTTTTGAAATTCT TAGAACTAATTATTATAGACAACAGTTATGCACTATGGGATTGACTTTTACCTCTTAATCTTCTTTGTGATACTCTGACT ATTAATCTTTCTATGCATGCGACCCTACCATACTGTATTTTGGTGTGCTTTTGTACCAAATAGTGCAGAAATCAACATTT TCTGAAATTCATATTCTCCCTTTGGGTGGGGTTGGAGGGTTAGCTTCCTTATATAGGATCTGGCATTTCATTAGATGAAG GGTTTGAAGTAAAAAATTGTTTATGTTGTAAATGTTATGGATCAGATGATGCCAGTAATTAATATCCCGTCACTGAATTA GTGACCTCTATATACTGGCCACTAATGCGTGACCCTTTGGGATTTGTTCAAAGTGAGAAGAAATGGTGTAGTTACACGCT AGCAGATCCTTTATTGTCTTGGGATTTAGGAATTCAATGGATCGTTACCAAGAAATACACTGGCTAAGATGTGCATAGAG CAATCCTTTCAGATAGTTTATTTTTGGAGTTAGGCCTAGCCAAAATTCCAAGACCATGTAGCGTTGAAGGACCTAATGGA GCTACTTGAGGCCATTAATAGCTTCATCTGAATCATAGATGGTTGTTTGGTTTCATATTCACATTACAAGTCCTGGACCA ATATAAGGGTGAGAACACAAGTTCGAACCCCGGGAAAGTCATTTGTTGGGAGAGATGGCTACAGTTTTCTGAACGGGTGG GAACATCCGTCAAAGACAAAAAAATAAAAATAGAAAAAATTACAAGTCCTGGAGCATCATGCAAGGATTGAGAGGTTCCC CTCTGTGGAATGCTTAAATCTGGCTGCTTGTAATATTACATCTAGCAATATGCCACTGATTGTCTCTAATTTTTTCTTAC TCATTTCTAATATCATGTAATTCTCTGGCTCAATAATTAGCTTGATTCATTTTCCCTTTTGCAATGAAGTTTACATGCTT GATTTCCTTTTGAAAGTTTATACAATGATCAAATATGAATAATTATTTGTTTATTGAACTTTTGCAGTTATTAGGGTGGC TGGTTGCATCACCTTTTATTTTGGGAACTCTGTACATAGTACTATTACCATGCTTCAAATTTTTGGTTCAGAAATTCTCA ACTGTTCCTTTAAGTCCGAAGAAGCCTCTTCTCCATCCACACTCAGAAATAAGCCTGAAGGTAAGGGATGTTTGAGAAAA CAATTTCACAGTCACTGTATCTGCTTAGTGAGAGTGATCATCAATCATTCATAGGTTCTTTTGTGACATAACTTGTACAT AACAAACAAAAGCGTGTCACTGTTTGTAACGCTAAGATTTACTTTGTGAAGTATGTGATGTGATTATCAAGAATAGTAAG CATTGGCAAATATATAATTAATGCTCTCATTTTTATTAAAATTGTTGTTTATTTTCCTATTATATCATATATCTCTCTTA TTATGAATAATTTCATAAAAAGTGGGTAAAATAATTAAGAATTGTGTGAACTTAGAAATATAATTGGTATGCACCAAAAA AAAAAGATATATAATTGGTAAGATACAATGTTGTCAAATTGCCGTGAGGTCAAAATTCGCAATTTCATTTAGCGGATAGC GTTGTGGGCAAATAGCGGTAACCACATAGCGGTTAAAATAAGTAAAATATTATATAAAAAACAGCTCTTATCACAAGTTG TTTGTGCAAATAAAAATCTGCTACATAATAACAATTAAAATAAGGCATGTATTGCAATGCATAAAATCATCATTCTTAAT AGCAAAATGTTAAATATTCAAGGCTGCCACCGGCTCAAATCAAACGACTAAAGACTTAAAACAACAGAATTTAAACTCAA GTCTCAAAATAGTAAAAGGTAAATGCAACAAAAGACAGTTCAACTCATTATCCTCTTCCTCCTCCCAGAATTTTCATCAC CCACATCATCAGAGAGTGAAACATATCCTTCTAACTTGTATTTACGTGTCCTCCAAATCATTGTCTAATATCTCTTCTTC TTCCTCTTCAACAACCACCACCTCTTTTCCTTTCTTGGAAGCACCTTTCTTCTTCTTAGATGAAGTATCTGCAGCAGTTG GGACCTCTTTTCTTTTTCTAGTTCTTCGCCTAGTGTTAATAGTAGGCTCTCCAATTCCTGAAGCTTGGTAAACAACATCC CAAGTGAGGTCATCATTCGGAAATACCCTATCATTTTCAGCATCATTTCCATCCTCATCCATCGTCCCCACTAGCCATTC ATTGCTCTTATCAATGTCATCCAAGGAGATAGGGTCCAACTCATCTCTAATATTGTACCTTCTTACTAGTGCTTGATTAT ACTTGACAAACACCAAGTCCTCAAGTCTCTTATGCTCAAGCTTATTTCTTTTCTTTGTATGAATCTATAAAGACGCTAAG GTAATAAAATTAAAATTTGAAGTGACATGTTAAAAGTTAACAAATACAAGAATAAATATTAGCAAATAGTGGAGTTGAAG AGCTTACTTGTTCAAGCACACTCCAATTGTGTTCACACCCAGAAACACTGTAAGCCAAACTTAAGATCTTTATTGCCAAC CGTTGCAAATTCGGTGTTGATTTTCCATACATTCTCCACCATTGAGCTACAAAAGCAGAAGTCCAAATATATGTGAAATG TTATGCAATGCAATTGCATTAACATATAAAAATATTCAATTGTGCTCACCTGGTGCAATTGCGCCCCTTTGTTCAATTGC AAATCTAGTTCCAAACATGCCACCACCAGATTTGTAAATTGGTAGCTCTGTAAGTATCTTCTTCCTTAGTTCATCAGTAG GCGACAACCTTTCTACACAGTCATAGATCCCTTTCTGCACTCAAAATCATAGTCCAATTATAGATCATTATAGTAGTACT CTGGGTTCAGGAAGTGATCAGCAGCATGCAATGAGCGATGTAGTTGACTATTCCACCTATTGTCTATGATTTCTCATATA TTTCCATATTTGTTGTTGTCGTCACCAAGGGAAGCTCTGATTGCTTCTTTGGCCATATCCATAGCCTCATAGATATAACC CATAGCAAGTTTCTTCTCGATGTCCGCTAGGCGTAGTACAGTGGACCCATGACCTTGAGTGTATAAGGAAAAAAGAAAGG GAAAAAAAAAGTTTCAGAATTGAAAACAGATTGTTGTCCAAAACAGTAAAATGTGAAGAAAAATAGAAAAACAGAAACAA CAAAATTACCTTTAGTGTAAAACAAACATTGTTCCAGAAAGAGTTCATAAAAACAGTTTTTGTTGCTTCCTTGCTTTTTT CCTCTTTGGACAACTTGTTAGTTGTCTAATTGTTTGACACAAACATCTTCCTCGGATTTCGTTTCTCCTTCTGTAATCTT TTCAATGTAAGATAGGATGTAACAGAATGTCTTACCAATTCTCTTTTCTTGGTATAGAACCTCAACAAGCTCAATGTACT AGAGTAACCGTAGATGTAACCAACAAGAGATATGGCTCTTTGCATTGTTTTCTTTATGAGAGCGATCTTTCCAATGTCTT CCAAAATAAAATTTATGCAATGAGTTCCACATGGTGTCCAATATAAGTTAGGTCTTTTTTGTTCTAGCATCTTTTCCGCA CTCACATAGTTGCGGTCATTGTCGGTTATAACCTGAACTACATTCTCTTCCCCAACTTCACCAATTATGGAGTCAAACAG CTCATTTCTCACCAGTTTTCACAAAATCAGAGGCATCAACCAATTTCAAAAACATTGTTCCAGCTGAACAATTCACCATG AAGTTAATAACTGATCTTTGTTTTCAATCAGTCCATGCATCGGACATAATAGAGCAACCAAATATTTTCCATTGCTCTTT CTGGACCTTCAACAAATCCTTAGTGTACTCTACTTCCTTTGTAAGAAGTGGAACTTGTATGTCATGATATGAAGACGCTT TTAAATGAGGTCTGAAGCTTCCAACAGTCGCAAGCATGTCATGAAAGCTTTGCAACTTAACTATGTTAAAAGACAAGCCC ACTTGATACCAAAAGCGGGCAATATACTGATGAACTCTTGTTGTAGCCTTCTTATCACATGAGGCTCTTATATTTTCCTA CCTTAACTTCTCATTCTTCTTCTTTGCAATGGAACTTCTGGTTTTCGGAGGTACAAATCAATTTGGCCCTTAGGAACCTT TTTCTTTTTATTTTCTCTCTGAGGGCTAGTTGCAATCTCGAGTTCTTCATCCATAGCACGTTCTTCATCACTATCACCGC GGTAGCAACCATTGTCAAGAATATCAAGGAGAACCCTTTCATATGCTTCGATGTCTTTTATTCTTTTCCTTCAAGATTCC CCACAATTCATCTCGGACCTCTTTCGAACACTTAGGACAAGGTGTGACATTTCCTTTCTTCCCCATCAAGTGCTCCTTCG TTCTTGTAATTCCACCCTTTGTGATTTTAGCACAGAAATTGCAAACACATAGACTAGTATCATTCTCATCGAATGGCTTA CAAAATTTCCATCCAGGGTCAGGCCTTTGAGGTGCTGCAAGAACTGGGGTTGAATTGGAACCTTGTGCAGAGGTTTCAAA ATAAAACATTACACGTTAAGATAAAATAGTACAGGAACAAAAGAAGAATCGGAGGAAGAAGAATAATAGAAAAGAAAAAG AGAAGATGACACCGACTGTGAAAAAAAGTAGTAACTGAGAAGAAAACCGTTAAACTAGCCATAAGATACATTTGAAGATA TTACAAGTTAAGAGAAAAGGAAGAAGAAACATTTGAAATAAACAAACAACGGGAAACAGAGAAAAAGAAAATAGTGAAAT ATAGAAGAAATATTTCAAAAAACAAAGCATAAGTTTCAAACAAAAAAACTGATCATACGAAAAATAGAGTATGACGTTTC TTCTACTCACCTGAAACTTTAAGAAGGTGTGCTACTGTGTTGTAGCCTAGGTCTCTAAGAAGGAGAATGAGGAAAAGAGT TCGAAGGAGAGGAAAGGAGAAGGAGAATTTGGAAGCTTTTCAATTCTCCCATCAATCTTCTTCACGATGAAGCATTAATA TAGAAAAAGAGTTAATAGGGAATTAATTGGGGGAATTAGTCGGTGGCCCATTAGTAAAGAAATACCATATTTAAAAACCC TCAAAAATGAAAAAAAAAAACATTCAGATTCCTAAAATTCCACTATTTCTGAATCTGAAAAAACGCCGCTTTGGCATTCT CGCGATGGCCACTATGTCGCGGTGAGACTAAACACTAATAAGATAATAATTAATATTGGCTTGAACTTGTATTGTAGTAT TTCCTCTGTTTGTAATATTTTGTAGTTTTAGTTTTGGTGCTTGCTGTGGTGCCTCCTCACAGTTGGAGGTGTGGTACCTC CGCCTCGTTGGACCAGTAGAATATAACCACTTATTAAAT
CDS sequence (LotjaGi3g1v0334900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGATTGGGAAGATGGGAATAACCGATTGGTTCCACAGGAAGATCACTGATCCCCTTCTTTCCATTATTCGCCGAGG AGCTGAGCCTAACCAGTTGGCTTTTTCTGCTGCTCTTGGCATTACATTTGGAGTATTTCCTATATGTGGTGTCACTGTAT TCCTCTGTGCAATGGCTATTGCATTGCTTGGATCATATTGCCATGCTCCAACTGTGATGCTTGCTAACTTTGTTGCTACG CCAATAGAGTTGAGTCTGGTTGTACCCTTTCTACGCTTTGGTGAAGTTATCTCTGGTGGACCTCATTTCCCTTTGACATC TGATGCTTTAAAGAAAGTTTTTACTGGTCAAGCTTCACGTGAAGTCTTATTAAGTGTTGCCCATGCGTTATTAGGGTGGC TGGTTGCATCACCTTTTATTTTGGGAACTCTGTACATAGTACTATTACCATGCTTCAAATTTTTGGTTCAGAAATTCTCA ACTGTTCCTTTAAGTCCGAAGAAGCCTCTTCTCCATCCACACTCAGAAATAAGCCTGAAGGTAAGGGATGTTTGA
Protein sequence (LotjaGi3g1v0334900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAIGKMGITDWFHRKITDPLLSIIRRGAEPNQLAFSAALGITFGVFPICGVTVFLCAMAIALLGSYCHAPTVMLANFVAT PIELSLVVPFLRFGEVISGGPHFPLTSDALKKVFTGQASREVLLSVAHALLGWLVASPFILGTLYIVLLPCFKFLVQKFS TVPLSPKKPLLHPHSEISLKVRDV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 32 | 32 | - | – | |
| PANTHER | 2 | 184 | 183 | 3.9E-94 | – | |
| PANTHER | 2 | 184 | 183 | 3.9E-94 | – | |
| Pfam | 16 | 158 | 143 | 9.4E-13 | ||
| Phobius | 33 | 63 | 31 | - | – | |
| TMHMM | 43 | 65 | 23 | - | – | |
| Phobius | 64 | 129 | 66 | - | – | |
| TMHMM | 72 | 94 | 23 | - | – | |
| Phobius | 130 | 152 | 23 | - | – | |
| TMHMM | 130 | 152 | 23 | - | – | |
| Phobius | 153 | 184 | 32 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0334900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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