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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0336900 |
| Transcript ID | LotjaGi3g1v0336900.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | methyl esterase 12; TAIR: AT4G09900.1 methyl esterase 12; Swiss-Prot: sp|Q940H7|MES12_ARATH Putative methylesterase 12, chloroplastic; TrEMBL-Plants: tr|G7IYE3|G7IYE3_MEDTR Methylesterase; Found in the gene: LotjaGi3g1v0336900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:70734605..70740306) extracted from Lotus japonicus Gifu genome v1.2.
TAGAAAAACATGTTACTGTTTGGTTAGGTTGAGATTGAAAGCAATAGAGAGAGAGAGAGAGAGAGAGAAAGATAATGAGA ATTAGCATTGAAATGATGAAATCAAGTATCGTGTCGTTGAATTGAAACCCTGAAAAAAAGCATTTAATAACCTCTAAAAT CAGTTGAGTCTTCGTTTCATTCATTCTCATATTTCTTTCTTTATTTTTATTTATTTTTCTCGCATTTATTCCAACAACAA CTCCTTCACTCAACAACTCTCCCAACCACGGAAAACGACATACCCAGAACGAAAAATCGTGACTTTCTTCAATTTCCAGC AATTTTGTGTGGAAAAATTGAGTTTGGAAATCATGGGTAATCGTTTTGTGTGCATGACGAAGAAGGACTCCAAAGAGATT GGATCCAGAAGCAAGAGAATGGGTGGTGGTGGTAGATCACAGAGGAAGATGATGACTGAAGAAGACTTGCATCTTCAAGC ACTTTCCATGGCCCTTCAGCAGCATCAATTGTCTCAGAGGTTTGAAGGTTCCATGTCTAGGAGAATTGGTTCCACTAGCT CTAGAAGGAGAACTTTACCTGATTCAGTTCCAGTCAACAACAAGCAGGTTTGTGTTTTTAAGTTTGATTTTGTGGGTTAT TGATTGAAAAGTTTTGATTTTTGAATGATTTGAGCAGAGTTAGAAAGTGGGTTATCATGATTGAGATCCTTGAGTGGTGT TGGGTAGAAGTGAAAACTACTAATGAATGTGGAAACATGTTTGAAAAGTTTGCATTAGAAAAAGAAATCAAGGGTTGCTT TTTTGGGCCTAAAAAGGTGTATCTAGAAAAGTACAGGGCCAATTCACTGTGTTATGAAAAGAAGATGGGATTTGTTTATG ATTAATTGCCTGTATTTTGTACTGGTTTACATACCCCACTTCCCTGACTTGTGTGGGATGTGGTGCCCAGGGTTGACTCC ACTAAATACTAATGCTTTTTTTACAAAAGTTATTCTTAAGAATCATGGGAAAAATGCTTTTTTTTTTCTGCTATTTTAGA AGAGTATAGCACAATTGTGTATGGGGAAAGTTTAGGCTTTTGGCATTACTTCAGCCATTATTTTTATGAGCATTCTCACC ATTGGTACTTTTGTTGAAATCATCATCTATTGTGCATGTTTGAATTAACTTCTTTTTCGTCAGAATCAATTCTCAAACCC AGACCCTACTCACAAAAGTTTATCCCCATAATGGATTCTAATTTTAGACTCAATTGTGTGTGTGGAAGGATTTCCAAACA TGCACTTAATTCTTATATAGCGGGATTGCTTGTGATTTAATATAAAATTAGTCCTTCTTTTAAGGCATCTTTGAGAAGTT TGAGTTTATGCACAGAATTATATTTAATATATTCTTGAGTGTTGCAAATATTAGCATGGACCTAGAGTTGAAAGGAAATG AGTAATAAGTAAATATACTCTTCAGTCTTGTATTTTCACAAAAGATTGGTTAACTAACTTTGTTAGCCATGTGTCGGAAA TTATTTATAGAGTATAACAATACTGTTTTAGTGCATGTTTGAAATTTTTTCTATAATTGATTCTAAAGCTAAAATAAATT CTGGGGAGAAACTTCTGTGAGTAGCTTCTGGAAACCAAAATTGATTATGAGAAAAGAGAAATTGATCCAAACATGCTATT AATTCTTTTCGATTGTGCATGTTAGAATATGCTTCCCTCCTGAATTTTATTCCAAATATCCCTGATCATTGCCAGCCATA TCATGTTCAGGTTCCAGAAGATCTGGAGAACATTAAAATAAAGAAGTTTGTATTAATCCATGGAGAAGGTTTTGGAGCAT GGTGTTGGTACAAGACTGTTGCCTCTCTAGAAGAAGCAGGACTGCTTCCTGTTGCCTTAGATCTTACAGGTTCTGGAATT GATCTCACAGACACCAACAGTGTCACTACATTGGCAGAATATTCAAAACCTTTAACTGTTTATCTTGAAAACCTTCCTGA AGATGAAAAGGTTCGGATATGTGAATTGAAAATATATTTGACTTTAAGCTTGTTATGGTCTTGCATTCTGTTATATTTCA TGCAAAATGGAAACTTGCAGGTTATTCTTGTTGGTCATAGCATTGGTGGTGCTTGCATTTCTTACGCGTTGGAGCATTAT CCACAGAAGATCTCAAAAGCAATTTTCCTGTGTGCTACAATGGTGACCGATGGCCAAAGGCCTTTTGATGTTTTTGCTGA ACAGGTACCTACTAGCTTCTTCATTTACTTATGCTAAGAGTTGAAATCTTCAAGGTTCATAGTACTATAAATGGTGAATA AATCCTCAAATCAATCTTCAATTAGTTAATAACAATACATGCTAGAACATTGCCAACTATACTTTTTTAGCAATTGTGTT ATCATGTGGAACATAATATCACAAATCTACTATCACACAATTATTTTAATTTCACAACTTGGATTCAGTGGTTATAGTTT GAAGTCTTAGTCAACTTTCCAGTGAATATTTTGTTGATCTAATATGCTGCTCTGCGACCATGATTTTTCTGCCTTGGTAA TTAGTTTATTTTTAGCTGAAAACACTTTATTGTGAGAGTAAAAAAACTTTGAAAAGCTAAATGCCTGCTCAGCCTCAGTT TGAGAAAATATTTTCTCTTTTCAAAGTTTTTTTAATATTTGAAAAACTCTGAAAACAATTACAATTTTTTTTTACGATTT TCTTTACAAATATTTGAAAATAGGAAATTAAGTGAAACTAAGGTAGCATTTTTGTAATTAAAGTGAAATTAAAAAATAGA AACAAAACGTTTTGAGATTAAAAGTTTTAAAGTTTCTGAGGATGAAAAGCACTTCTGGGATTTTGAAACAATGCATATTC AAATGTGCTCATAATTAGAGTGGTACTGGAATATTTTCTTACTATACATATATAGCTTCTACCAAAGGAAAAGTTCTGTT TGATGCATTTTCATTTCTGAATCTGCATTTTTTTTCCTTCTAATTTCACTTTGTTTTGCATTTTGCTTGGAAGATTTGAT AATTGTTCTCACAAACTATGCTGCAGCTAGGATCTGCTGAACGTTTTATGGAAGAATCGAAGTTTCTGATATATGGGAAT GGTAAAGAAAAGCCCCCAACAGGATTTATGTTTGAGAAAGAGCAGATGAAAGGGTTATATTTTAACCAATCCCCAACAAA GGTATGCAGGATTTGAGTCTAATCTTTGTCCATCTAAATGTTTTAGCTCTGTCTCTTGACTGTGCATTTAAATTAGCTAC GTAAAGCTGTATAACCTGTGATAAATAGTAAAGTTGGGAGCTAAAAAACTCTTTCGTTAATTTTTTCTCCTGGTTTCATT CTCTCTCTCTCTCTCTCTGTCTATCTCTTATTTTTAGCACATGTTTGGGGTTGAAAGACAAAAATATTGTATAGAACTTT TTGTAAAATCGTAATTTCAAATATTAAAAAATACAAAAGAAATAACGGTTTCATCTAAGACTAAGTATAACTGTACTGAT AAGTACGTGAAGTGGAAAGCTTGTTGCCTTGATTAGGGTATATATAATCATCACATTATTTGTTGCCTTCAAGAGACACA TGCTTGTTGAACAAATTTTCCAAAATGATTTTTAGTTTTTTGTGAATCCTTGGAAGTATATCTGTCCAAGCCTCCAAGGT ATTTGTTTTGTTTAGATTGGGTGATGATTCTTGGATCTGATTTTTAGTATTGTATAGGTGGGAACTATTCCTTTATCTGG AGGGCTTTCTTTCCTTAATAATTTGGTTTGTCATACGAGTCACCCGTCTAAAGCTATTAGTCAATTCAAGATTCCAATTT TTATTGGGCTTTCACTTAGATGAGACCTGAATGATAGAGAAAGCATTGTGATTCAATCCCTTTTGCTTTACTTGATTCTG CCCACTTTTATTCCTTTATCAAGATAACAGAATATGGCCTTTTTAAGTCTTCTGGTATCTTTTCTTGTGATTCGAACTTT CCATTTCTTTCTCATTTTCTTTAATTGCCCATTTGAAAATCTGAAATCCCTCTAAGCCTCTAAGGTCAAGTCTTTTTTAT CCACAACAGCAATTAATAAGACCAATAAAATGACGTGCTTCTAATTTATAGGCTCTCCCTCAGTGGTTCTGGTTCTCCCC TCACACTTATTTTACATTAAGGTCAAGTTCAGAAACAGAAGTCTGTCTATTTTTGTTTGGTATCTGCATGAATCTTGGGT GTGCCACCTCACTTTGGAGCAGTATCTCTTAGTTTGCTTCAAGGATTTGGAATGGGACTAAAATTTGGTGGCAGTGCACT ATGTTTGCAGTCCTGTGTTTGTTTTGGTTAGATAAAAATGCCCATTTTTTTTAGGGCCTCGGTTGCCCCTAGTTTCATTT TGGAGGTAGGGTTATTGCTCCCACACTGAGCTGTTTCAGGGGAGTTGCAATTACTGATATGCAGATGGACTGAACATCCT TGTTGCATTCTTGATTACATCTTTGTTTGCATCTCTTTCCTTGTTCTTGTCTTCATTTTTCTATTTTGGAGGATGTCTTA TCCTCCCTGTTGTCCTACTTGATTTCTTCTAACAATCTTCTAATGTTCTTGAATGTTATCTAAACTACTTGATGCTTTTT TTTGCTGACATAAGAGCGTGATTGACCAATAACAGAAAGATACACTGTTATTAGATTGTAACTTAATTTCCAGCTAGACT TCATATATTGTAACTTACATGGTACATTACAGGATATTGCTTTAGCCATGGTTTCAATGAGACATAGCCCTCTTGGTCCA ATCATGGAGAAGCTGTGTTTATCTCCTGACAAATATGGTGCTGGCCGCCGATTTTACATTCAAACCCTCGATGATCGTGC GCTTTCACCGGATGTGCAAGAGAAGCTAGTGAGGGAAAACCCACCTGAGGGAGTTTACAAAATCAAAGGCAGTGATCACT GTCCATTCTTCTCTAAGCCACAATCTCTCCACAAAATTTTGGTGGAAATAGCTCAAATTCCATAGCTAAATGGTCACCAT GATTTGTTTTTATCTTTCCACCCCCAACTTACATTAAAGAGTAGAGTTGCTATGGCATTTATTGACCATCATATATGGAA CCCCAATTGGGAGAGGTATTTTTTATTTATTTTTATATAATCATGAAATATAATAGAGGAAGGGAGCATGATTTCATTGC CTTTGAAACAACATTAGTATTCAACTAGTAAGTATAAGTAACTTCTGTAAGCCTTGTTATTTTTTTCCGTGCTTATTGTA TATAGTAATAGTAATAGTAATATTAATTTTTGTACTTTACATTTTGGCTTTGACAACTAATTTTTATTTTTATTACATAG TAAAAAGTGCAAAGGCTTCGAGTTTGAGGTTTGTGGGATGAACCTCACATTCACATTTTCTCTATTATGGGATGAACAAA GTCATGAGTCACGTCTTTGTTACTCTCACGATATGTGAGGAGTCAAGCTATTTTCCAAACACAACGATTGGAAACAATAA TTTGCAACAATCAATAGTTCATTCCTATCCAAATCTTGTTATAAATTCCATGAGAATACTCTTCAGTGATCACATCATTA TTTAATTTTCTCTCGTAGAGCTTCATGTAAGTAGATAATTCAACTACCATTTTCCCTATACGTCTCTTCTTTAGCATAGA AAAGGAGCATGAAAGAACATAT
CDS sequence (LotjaGi3g1v0336900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTAATCGTTTTGTGTGCATGACGAAGAAGGACTCCAAAGAGATTGGATCCAGAAGCAAGAGAATGGGTGGTGGTGG TAGATCACAGAGGAAGATGATGACTGAAGAAGACTTGCATCTTCAAGCACTTTCCATGGCCCTTCAGCAGCATCAATTGT CTCAGAGGTTTGAAGGTTCCATGTCTAGGAGAATTGGTTCCACTAGCTCTAGAAGGAGAACTTTACCTGATTCAGTTCCA GTCAACAACAAGCAGGTTCCAGAAGATCTGGAGAACATTAAAATAAAGAAGTTTGTATTAATCCATGGAGAAGGTTTTGG AGCATGGTGTTGGTACAAGACTGTTGCCTCTCTAGAAGAAGCAGGACTGCTTCCTGTTGCCTTAGATCTTACAGGTTCTG GAATTGATCTCACAGACACCAACAGTGTCACTACATTGGCAGAATATTCAAAACCTTTAACTGTTTATCTTGAAAACCTT CCTGAAGATGAAAAGGTTATTCTTGTTGGTCATAGCATTGGTGGTGCTTGCATTTCTTACGCGTTGGAGCATTATCCACA GAAGATCTCAAAAGCAATTTTCCTGTGTGCTACAATGGTGACCGATGGCCAAAGGCCTTTTGATGTTTTTGCTGAACAGC TAGGATCTGCTGAACGTTTTATGGAAGAATCGAAGTTTCTGATATATGGGAATGGTAAAGAAAAGCCCCCAACAGGATTT ATGTTTGAGAAAGAGCAGATGAAAGGGTTATATTTTAACCAATCCCCAACAAAGGATATTGCTTTAGCCATGGTTTCAAT GAGACATAGCCCTCTTGGTCCAATCATGGAGAAGCTGTGTTTATCTCCTGACAAATATGGTGCTGGCCGCCGATTTTACA TTCAAACCCTCGATGATCGTGCGCTTTCACCGGATGTGCAAGAGAAGCTAGTGAGGGAAAACCCACCTGAGGGAGTTTAC AAAATCAAAGGCAGTGATCACTGTCCATTCTTCTCTAAGCCACAATCTCTCCACAAAATTTTGGTGGAAATAGCTCAAAT TCCATAG
Protein sequence (LotjaGi3g1v0336900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGNRFVCMTKKDSKEIGSRSKRMGGGGRSQRKMMTEEDLHLQALSMALQQHQLSQRFEGSMSRRIGSTSSRRRTLPDSVP VNNKQVPEDLENIKIKKFVLIHGEGFGAWCWYKTVASLEEAGLLPVALDLTGSGIDLTDTNSVTTLAEYSKPLTVYLENL PEDEKVILVGHSIGGACISYALEHYPQKISKAIFLCATMVTDGQRPFDVFAEQLGSAERFMEESKFLIYGNGKEKPPTGF MFEKEQMKGLYFNQSPTKDIALAMVSMRHSPLGPIMEKLCLSPDKYGAGRRFYIQTLDDRALSPDVQEKLVRENPPEGVY KIKGSDHCPFFSKPQSLHKILVEIAQIP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 31 | 31 | - | – | |
| PANTHER | 51 | 347 | 297 | 4.6E-179 | – | |
| PANTHER | 51 | 347 | 297 | 4.6E-179 | – | |
| MobiDBLite | 59 | 81 | 23 | - | – | |
| MobiDBLite | 59 | 83 | 25 | - | – | |
| Gene3D | 92 | 346 | 255 | 7.1E-57 | ||
| Pfam | 98 | 335 | 238 | 2.2E-18 | ||
| SUPERFAMILY | 98 | 344 | 247 | 4.63E-30 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0336900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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