Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

LotjaGi3g1v0343400.2

Overview

Field Value
Gene ID LotjaGi3g1v0343400
Transcript ID LotjaGi3g1v0343400.2
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Exocyst complex component 8; TAIR: AT5G49830.3 exocyst complex component 84B; Swiss-Prot: sp|Q9LTB0|EX84B_ARATH Exocyst complex component EXO84B; TrEMBL-Plants: tr|V7BCG0|V7BCG0_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0343400
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:72008407..72014947) extracted from Lotus japonicus Gifu genome v1.2.

TTTAAATTGCGGTCGCGGTGGCAGCTGCGTTGCGGAATTGTGGACAAATGGGAGGTGATACGGTGCCTTCTCAGGCAGAG GACCCTAATGGAGTGGAGCGAGCAATTGTGGTTGCGGACCGCAATTGTGAAATCGTGGCAGTAACCACTTGGTCACAGAT TTACTTCCATATAATCATCTAACAATGTGACATTGGATATGCTTTGTTCACGCCACGCCGCAACAAGTTTTCTTGCTATT CATATTGTCTGTTGTAAAATTTGTAAAACCGATTTTGACAATGGTTTGTTTTTCAGGACATTAAGCAATTATGCACATAT TTAGTGGATCTGAAGAAAGCTTCTGCTGAAGAGATGCGTCGAAGTGTCTATGCTAACTACCCAGCCTTCATCCGGTTAGT TGTGTGTCGGTTTACGCATCTTTGATATGATTGCTTGTTGTTGGTTTGTCTCAATTGTATGAAATTTAGGCTGGCTGTTA AATTTGACAAGGAAGAGATTCGAGGTTTTGAAGTTGAACTGAAAATTGTGTGATGAAAATGAGTAAACAGTATAACCTAC ATATTTACAGAGACACTCATTGAAATATATCTTACTTCAATCAAAGTAGTTCATGATAAATTAACATTGTACTGTGTAGG AATGAGTAAGACAGTTGCAGCAGGTTTTTCAGGTACTGTGTAGGAATGGAACTGTTTCTTAAAATATGATTTATAATATT TATAACAATCAACAACACACAATCAATGATTGGTTTCCACATGAAGCTCATGGCTTCTGTCCCTAATCCCACTGGAACCC TTCAAGCTTTTCTACATTTCAAATTCCCCTCTGATGGACTTGGATTTTCTCAAAGCGTGTGGAGAAACCAAGATAGTATA TGAACTCAACCTTTTAACCATAAACACAAATGGTCTAGTGGAGGTGGTGCTTGACACAGGCCAGTTCTGAGTTTTATTCA CCCTTAGCTTGAGTATCCTTAGTTTTTTTGGCCAGTTCTCACTCTCCATATTTGGAGGCCTGTCCAGACAACTTCCCAGT TTAATTAGTCTGGTTTTTCAAAAACTGGTTTGTGTTTAATGTGTGTGTATATCTTGTGATTCTCCAAAATCCTATAAAGT CCTAATATTTTAGCTGCATCTTCATATATCATCAGAAAATTTTTATCACCTATGATTTGAGCATCTGACACTTCTCATTG TGATTTTATATAGGAGAGTATTTTATACTTTATAATTGGGCCTTAAAAAAGGCAACTGATGTGTTTATAGCTGATGTTAT ATTGATCTCTGTTTTGTATAGTAGTCTATTACTGCAAAACCATTTTAATTTTATTTAGCTGTTTTATCATTGGTCGTGTT TTAAATTTATGTAATATTTAAATGTTACAGAACATCTAAGGAGATATCAGATTTAGAAGGTGAGCTGTCATCTATTAGAA ACCTGCTATCTACACAAGCTACCTTGATACATGGTTTGGCCGAAGGAGTTAACATCGATTCATTATCGATCTCCGATTCC GATGGACTTTCTGCACATGCCTCATCAGATTCTGAAGATAGGGAGACATCTGACCTTGACACATGGTTAGTTGAGTTTCC TGATCTCTTGGATGTTCTCTTGGCTGAAAGGCGAGTGGAAGAAGCTTTGGCTGCTCTTGATGAAGGAGAACGTGTGGTTT CTGAGGCAAAAGATATGAAATCTCTCAAACCATCTGTAATTTTATCGCTACAGAATTCCATTACTGAACGTAGGCAAAGA TTAGCTGATCAGCTTGCTGAAGCTGCTTGTCAGCCTTCCACCCGTGGTGCTGAACTTCGTGCCTCAATCTCGGCCCTTAA AAAACTTGGTGATGGTCCAAATGCTCACAGCTTGCTACTTAATGCCCATCTGCAGCGATATCAGTACAATATGCAAAGTC TTCGGCCATCAAGCACCTCATATGGGGGAGCATACACTGCAGCTCTTGCACAACTGGTATTTTCTGCAGTTTCACAAGCT GCAAGTGATTCATTGGCTATTTTTGGTGATGAGCCAGCTTATACCTCTGAACTTGTGATGTGGGCTACTAAGCAAACAGA AGCGTTTGCTCTTCTGGTGAAAAGGCATGCATTAGCTTCATCAGCTGCTGCCGGAGGTTTAAGAGCTGCTGCAGAGTGTG TTCAAATAGCATTGGGTCATTGCTCATTGTTGGAAGCTCGTGGCCTGGCTCTTTGTCCTGTGCTATTGAAACTTTTTAGG CCTAGTGTCGAACAAGCATTAGATGCCAATTTGAAACGAATTCAAGAGAGTACTGCTGCTTTGGCTGCAGCTGATGATTG GATACTCACATACCCTCCTACAGCTAATCGTCAGACTGGTAGTACACCAGCATTTCAACATAAACTTACAAGTAGTGCCC ATCGCTTCAATTTGATGGTCCAGGTGAGATTTTTTTTGTCTTGATACTGATTCGTCACATAGAATGATATTTGGTTTCAG AAAACAGATGTAGCATTCAATGCGACAGTGTACAAATTTTGTTAGTTTTGTTATCAAGTTGAATCTTTTCTCATCCGGTG CAATGCATGGGTATAGTTATATAAAAGTTAAATTAAAAAATCTCATGAAATTTATTTAATTGATGAAAATTACATTGATA TCTAAAAGTAAATAAAATCTACAAATATTTAAAACTTTTAATTGAAAAGTCTCAAAAAAATGATTTACAAGTATCCTATT ATATTTAATTTTGATTTGGATTATTGAAATTAAAGAAAGTAAAAACCTTTATTCAAATAATTAACTAAGAAATAAATTAG TATCGATTTGATTTTATTTAATATTGAAACTTATGACATATGCCACAATATAAGAAAGACATGTGATTTAACGAGAAGAG AGAATGAGGTCTTAAGTTTATATATTGGAGTGGGTTTGGTCGTTGAAATCATTTCCTGGTCTTTTTTAAATAATATCCAC CTTTGGTATTTGATTTTTCTTAGTTCGTTCAATTTTCTTATTTGGTCTTCTAATCACATGGGGTACTTTTTTCTTGCTGA TATTGAATAGATAATAACCTTCTTACTGAAATAGACATACCAGCCTGCAATTTTACGCTATACCAATTACCAAGTTATAT CTCTGTTTCCCATGTTCACTTTTATTGGCTCTGTATTTGCAATTCACTTTATGTTGAATGTCCTTTATGCTTATACAGGA CTTCTTTGAGGATGTAGGACCACTGCTTAGTATGCAGTTGGGAGGGCAAGCTTTGGAAGGGTTGTTTCAAGTATTTAACT CTTATGTGAACATGCTCATAAAAGCATTACCTGGATCAATGGAGGAAGAAGCAAACTATGAAGATTCTGAAAACAAAATT GTACGGATGGCTGAGACTGAAACCCAGCAGATTGCATTGCTTGCTAATGCCTCATTACTAGCAGATGAACTACTTCCTCG AGCAGCCATGAAGCTCTCCCCCTTAAATCAGGCTCCATACAAGGATGACAATCGAAGAAAAACCTCAGAAAGGCAAAATC GCCATCCTGAACAAAGAGAATGGAGGAGACGACTTGTGGGTTCTGTTGACAGATTGAAAGATACATTTTGTCGACAACAT GCCTTGGACCTAATTTTTACAGAGGAAGGTGATAGTCATCTTACAGCTGACATGTACATAAATGTCGATGGAAATGCAGA GGAAATTGATTGGCTTCCATCTTTAATTTTTCAGGTATTTTGAGAAACCTGATATTTATTTAATTTGTTGCTATTAGTTT CGTGAATGTATTTTAAAGATTTCAAATTTTAATTCTTCAGAGTTAATTTGGAATTTACTTCTTTTAGTTGCTTTTTGTAA TGTGGCTTCTCGGTTCTCTCCATTCTGCTAGCTCTTTTCTTCATCTTAGGGGGAAACATGAGGGGGTAGGTTTACCATTA TCACTTCTGGTATGCTAGGAGGAGAAAGCCTCAGATTCTGATTCTGTGATCCCATGGCTGAGGGTTTAAATATTTTACGG GATCACTAAATTAAATTTATGGTCTGTATATTTATAATTCAAGAATACCCAGACTAATTTCCAGCGTTGGTTAATTTTAC TCAAAATCAACTTTTGTATTCTGAAATGGCTATTTATGGTTCTGAACAAAATTATTTTCTGGAAGAATCTGTTCCTGTTA AAATTTCACTTACAGAAAAGAAAAGTTTCTACTGGCATGGACTGGCTGAGTACAAAAGTGATTTTATTTCACTTACATTA AGTTTTCTTTTGTCTTGTATTATATGCTCTTGGGGTTTAAATGTTCCTTGGTCCACAGAAGGAATTAATAAATTGTGTCT CGTTGCCTATGTACTCATCAACTTTTTTAAATATCAGAGAATTCATATTATGTGTGCATTGTGGTCCTATTTTACACACT GGCTGCATAGTTATATATCTCCTGGTTTAGATATTTATTTTTTTCATGCTCTCATTATTTATTAAAAATTAATGATTTAA ATTGCAGGAGCATTTAACATATGAAGCTCCATCCATTTCCCTAAGTAGACAATTATTTTCTATCTTCGTGCAGATTGATC TGTCTTTCCCATTTATTGCCATCAATGCTAACCGGTATTTGAAATTGATTTTGAAACAGAGTTCATATTAATTTCCACCT TTAAATATCTTTAACCATGGTGTTCTTGCGTTGGATAGTGGATTGAATTGAAAAACTACTATTCTTTATAATTCGTATGA CGAGTGTTGGACTGTTTAATTGATTTTTTTCTTTTTTGCAGTATGAATTATCTTTGTATTTTGCTAAAATCAGAACAAAT TATCTTCTTGCTTCGCAGCAGATTTATATGCTACAATTATTATTCAAGATCTGATGTAACTGTTTGTGCTATTGTCCAGG AGCTTTTCATTAAACTGAACAGAATGGCCAATATAGCATCGGATATGTTTGTAGGGAGGGAAAGATTTGCTACGTTGCTC TTGATGAGACTCACGGAGACTGTTATTTTGTGGCTCTCTGAAGATCAGAGCTTTTGGGATGATATTGAGGAAGGACCAAG GCCTTTAGGTCCTCTTGGTCTTCAACAGGTATGATTTTGGAATTTTTTTACTATTTTATATAATTTTCTTTTAGTTGTGG TTATATAAGTGACAAAAACGCATATGCCAAATAAGAAAGGAATCGGTGCCTTTATAAGCAAATCTGGATGTGAGAATTTT ATTTTAGGGTAAATCTTTCTAAGGCAAGTCTTGTATCATTTAGAGATCAAAGTATTGGCCTTCTGTTCTAATAACTACTT TAAACAGAATTTTTTGTTTAACTAATAAATACTTTCTAATTTAAGTGAGCTGTACCTTAAAATAATTAATTAAAAGATGA TCCAAACTAAACTAAATTTAAAGGCATGGAAATAAGCTACAACAGCATGAGAAATTGTTAATCTACCCCTATATAAGTCC TAATTTTTTAAGGTGAATTAGCTTTGATATGCACCTTCTTTTTAGGAGGTTATGTATCTTCTCAAAAAATTTAATCAAAT TTCTATTAATTAAAACAATCACTACAAAAAAAATTGACATTTCACACACGGTAGGTGCTAGTTACTTTTTTAATTCCATG CAACTTCTGTGTCATAGCTATTTCTTTTTCAAGTTAATCTTTGCTAACCATTCAGATTCTGGTTGCATGATGTGATAACA TTTATTTTTGTATTGGACTGTTGATGTTTTCCAGCACCTCAAGGAAAACTTTTTGCCTCTATATTTGTTATATTATGTAA AATGATTATGTTGTGAGATTGCTGAATGTTTTATACTTAAAAATGTTGAAACCATATGCTTTTACACTAAAATGATTAGC TAGCATGGAAGATCAATAGGTACAAACTTAACAGGACGGAACCTTTTGAACTGCAAAGTTCACAACAGCCATATAATTTT CTTTTGTACATTGTGCAGTTCTATTTGGATATGAAGTTTGTTGTATGTTTTGCCTCCCATGGTCGATACTTGTCAAGGAA TTTGCAACGAATTGTCAATGAAATTATTACAAAAGCAATGACAGCATTTTCTGCAACAGGGATGGATCCATACAGGTAGG CTAGTCCAAATATGTTTTATTCACGTGTCAGTATCAACACTCTCTTTATCATTAAAAAAATTATGTTTTCTCAATGTTTT CTATTCACAAGTGAGAAACACTCTTATTAACACTGTTAACTCGTTTTATGATTGGTCAATTTTTTTAAAGCTCAATACAT TTTTAAAGGGTATTTGACTTTTAAAAAATTAACCAATCGCACCGTGCTGATGAGTGTAAAAAGAAGTGTTGACATTTTCA TTTGGAGATTGAATGTACTTGCTCTTTCTAAGAGGCTAATGTTTGTTGCCATTGCCAGAGAACTGCCTGAAGATGAATGG TTTAATGAAATATGTCAAGATGCCATGGAAAGACTCAGTGGAAAACCAAAGGAAATAAATGGAGAGAGGGACCCTCACAG CCCTACTGCATCTGTGTCTGCACAATCAATTTCATCAGTCAGATCTCATAGCAGTTCATAA
Download Genomic Sequence

CDS sequence (LotjaGi3g1v0343400.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGCGTCGAAGTGTCTATGCTAACTACCCAGCCTTCATCCGAACATCTAAGGAGATATCAGATTTAGAAGGTGAGCTGTC ATCTATTAGAAACCTGCTATCTACACAAGCTACCTTGATACATGGTTTGGCCGAAGGAGTTAACATCGATTCATTATCGA TCTCCGATTCCGATGGACTTTCTGCACATGCCTCATCAGATTCTGAAGATAGGGAGACATCTGACCTTGACACATGGTTA GTTGAGTTTCCTGATCTCTTGGATGTTCTCTTGGCTGAAAGGCGAGTGGAAGAAGCTTTGGCTGCTCTTGATGAAGGAGA ACGTGTGGTTTCTGAGGCAAAAGATATGAAATCTCTCAAACCATCTGTAATTTTATCGCTACAGAATTCCATTACTGAAC GTAGGCAAAGATTAGCTGATCAGCTTGCTGAAGCTGCTTGTCAGCCTTCCACCCGTGGTGCTGAACTTCGTGCCTCAATC TCGGCCCTTAAAAAACTTGGTGATGGTCCAAATGCTCACAGCTTGCTACTTAATGCCCATCTGCAGCGATATCAGTACAA TATGCAAAGTCTTCGGCCATCAAGCACCTCATATGGGGGAGCATACACTGCAGCTCTTGCACAACTGGTATTTTCTGCAG TTTCACAAGCTGCAAGTGATTCATTGGCTATTTTTGGTGATGAGCCAGCTTATACCTCTGAACTTGTGATGTGGGCTACT AAGCAAACAGAAGCGTTTGCTCTTCTGGTGAAAAGGCATGCATTAGCTTCATCAGCTGCTGCCGGAGGTTTAAGAGCTGC TGCAGAGTGTGTTCAAATAGCATTGGGTCATTGCTCATTGTTGGAAGCTCGTGGCCTGGCTCTTTGTCCTGTGCTATTGA AACTTTTTAGGCCTAGTGTCGAACAAGCATTAGATGCCAATTTGAAACGAATTCAAGAGAGTACTGCTGCTTTGGCTGCA GCTGATGATTGGATACTCACATACCCTCCTACAGCTAATCGTCAGACTGGTAGTACACCAGCATTTCAACATAAACTTAC AAGTAGTGCCCATCGCTTCAATTTGATGGTCCAGGACTTCTTTGAGGATGTAGGACCACTGCTTAGTATGCAGTTGGGAG GGCAAGCTTTGGAAGGGTTGTTTCAAGTATTTAACTCTTATGTGAACATGCTCATAAAAGCATTACCTGGATCAATGGAG GAAGAAGCAAACTATGAAGATTCTGAAAACAAAATTGTACGGATGGCTGAGACTGAAACCCAGCAGATTGCATTGCTTGC TAATGCCTCATTACTAGCAGATGAACTACTTCCTCGAGCAGCCATGAAGCTCTCCCCCTTAAATCAGGCTCCATACAAGG ATGACAATCGAAGAAAAACCTCAGAAAGGCAAAATCGCCATCCTGAACAAAGAGAATGGAGGAGACGACTTGTGGGTTCT GTTGACAGATTGAAAGATACATTTTGTCGACAACATGCCTTGGACCTAATTTTTACAGAGGAAGGTGATAGTCATCTTAC AGCTGACATGTACATAAATGTCGATGGAAATGCAGAGGAAATTGATTGGCTTCCATCTTTAATTTTTCAGGAGCTTTTCA TTAAACTGAACAGAATGGCCAATATAGCATCGGATATGTTTGTAGGGAGGGAAAGATTTGCTACGTTGCTCTTGATGAGA CTCACGGAGACTGTTATTTTGTGGCTCTCTGAAGATCAGAGCTTTTGGGATGATATTGAGGAAGGACCAAGGCCTTTAGG TCCTCTTGGTCTTCAACAGTTCTATTTGGATATGAAGTTTGTTGTATGTTTTGCCTCCCATGGTCGATACTTGTCAAGGA ATTTGCAACGAATTGTCAATGAAATTATTACAAAAGCAATGACAGCATTTTCTGCAACAGGGATGGATCCATACAGAGAA CTGCCTGAAGATGAATGGTTTAATGAAATATGTCAAGATGCCATGGAAAGACTCAGTGGAAAACCAAAGGAAATAAATGG AGAGAGGGACCCTCACAGCCCTACTGCATCTGTGTCTGCACAATCAATTTCATCAGTCAGATCTCATAGCAGTTCATAA
Download CDS Sequence

Protein sequence (LotjaGi3g1v0343400.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MRRSVYANYPAFIRTSKEISDLEGELSSIRNLLSTQATLIHGLAEGVNIDSLSISDSDGLSAHASSDSEDRETSDLDTWL VEFPDLLDVLLAERRVEEALAALDEGERVVSEAKDMKSLKPSVILSLQNSITERRQRLADQLAEAACQPSTRGAELRASI SALKKLGDGPNAHSLLLNAHLQRYQYNMQSLRPSSTSYGGAYTAALAQLVFSAVSQAASDSLAIFGDEPAYTSELVMWAT KQTEAFALLVKRHALASSAAAGGLRAAAECVQIALGHCSLLEARGLALCPVLLKLFRPSVEQALDANLKRIQESTAALAA ADDWILTYPPTANRQTGSTPAFQHKLTSSAHRFNLMVQDFFEDVGPLLSMQLGGQALEGLFQVFNSYVNMLIKALPGSME EEANYEDSENKIVRMAETETQQIALLANASLLADELLPRAAMKLSPLNQAPYKDDNRRKTSERQNRHPEQREWRRRLVGS VDRLKDTFCRQHALDLIFTEEGDSHLTADMYINVDGNAEEIDWLPSLIFQELFIKLNRMANIASDMFVGRERFATLLLMR LTETVILWLSEDQSFWDDIEEGPRPLGPLGLQQFYLDMKFVVCFASHGRYLSRNLQRIVNEIITKAMTAFSATGMDPYRE LPEDEWFNEICQDAMERLSGKPKEINGERDPHSPTASVSAQSISSVRSHSSS
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR21426:SF15
1 690 690 0.0 –
Pfam
PF08700
1 40 40 4.2E-5 –
PANTHER
PTHR21426
1 690 690 0.0
IPR033961
SUPERFAMILY
SSF74788
71 304 234 4.66E-58
IPR016159
Pfam
PF16528
79 287 209 2.1E-18
IPR032403
MobiDBLite
mobidb-lite
448 472 25 - –
MobiDBLite
mobidb-lite
452 472 21 - –
MobiDBLite
mobidb-lite
658 692 35 - –
MobiDBLite
mobidb-lite
672 692 21 - –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0000145
Cellular component Exocyst A protein complex peripherally associated with the plasma membrane that determines where vesicles dock and fuse. At least eight complex components are conserved between yeast and mammals.
Subterm of
GO:0006887
Biological process Exocytosis A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle. Exocytosis can occur either by full fusion, when the vesicle collapses into the plasma membrane, or by a kiss-and-run mechanism that involves the formation of a transient contact, a pore, between a granule (for exemple of chromaffin cells) and the plasma membrane. The latter process most of the time leads to only partial secretion of the granule content. Exocytosis begins with steps that prepare vesicles for fusion with the membrane (tethering and docking) and ends when molecules are secreted from the cell.
Subterm of

Genome browser

Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0343400.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…