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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0344700 |
| Transcript ID | LotjaGi3g1v0344700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Coatomer subunit beta; TAIR: AT4G31480.1 Coatomer, beta subunit; Swiss-Prot: sp|Q9SV21|COPB1_ARATH Coatomer subunit beta-1; TrEMBL-Plants: tr|I1KG56|I1KG56_SOYBN Coatomer subunit beta; Found in the gene: LotjaGi3g1v0344700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:72199521..72206511) extracted from Lotus japonicus Gifu genome v1.2.
CAAGAACATCTTAAATGCTGCAATAAATATTGGGCCGGCCATATCACAGAATCCAAATAGTAAACGACGCAAGGCCCAAA AACAAAAAAAAGAAGAAATTGATGAAGAAAATGCGACACAAATGGTGATGTTAATCGTTTCTTTCTTCATTTCAATCTCT CAACTCAGTTTCTCACATCACTCACAACACTCTTTCGAGAGAGAGAGAGCGAGATCTCACAGATCCAGATCTGCATTCTG CTTCACCCTCTTCTCCTCTTTAGTTCTCCCTGGTTCTTCATCTCCAATCCCTAATTCTACAATCTCCACACCCTCTCTCC CCCAATTGCTCATCAGATCTGAAACAAATGGAGAAATCGTGCAGTTTGGTGGTGCACTTCGACAAGGGAACGCCGGCACT AGCCAACGAGATCAAGGAATCTCTCGAAGGAAACGACGTCGGAGCCAAGATCGACGCGCTCAAGAAAGCGATCATGCTCC TCCTCAACGGCGAAACCATCCCTCAGCTCTTCATCACCATAATCCGCTACGTTCTCCCCTCCGAGGACCACACCGTGCAG AAGCTCCTCCTTCTCTACCTCGAGATCATTGACAAAACCGATTCCCGCGGCAAGGTTCTCCCGGAGATGATCCTCATCTG CCAGAATCTCCGCAACAACCTCCAGCACCCTAACGAGTACATCCGCGGTGTCACCCTCCGCTTCCTCTGCCGTCTCAACG AATCCGAGATCATCGAGCCTCTCATCCCTTCGATTCTCTCCAATCTCGAGCACCGCCACCCCTTCGTCCGCCGCAACGCC GTCCTCGCTATCATGTCTGTGTACAAGCTCCCCCAGGGCGAGCAGCTTCTCGATTCCGCGCCGGAGATCGTTGAGAAGTT TCTCTCCACCGAGCAGGACCCTTCCAGCAAGCGCAACGCGTTTCTCATGCTGTTTTCATGCGCGCAGGATCGCGCTATCA ATTACCTTCTCAGCAACATTGAGAGGATCACTGATTGGGGTGAGCAGCTTCAGATGGTGGTGCTGGAGCTGATTCGGAAG GTTTGCAGGAACAATAAGGGTGAGAAAGGGAAGTATATTAAGATTATTATATCATTGTTGAATGCACCTTCTGCTGCTGT TATTTATGAATGTGCTAGTACTCTTGTGTCGCTTTCTTCGGCTCCGACCGCGATTAAAGCGGCGGCGAGCACTTACTGCC AGCTTTTGCTTTCTCAGAGCGATAACAATGTGAAGCTTATTGTGCTTGATCGCCTGAATGAGCTTAAGAGCTCTAACAGG GAGATCATGGTTGAGATGGTGATGGATGTCCTCAGGGCACTGTCCACCCCAAACCCTGATATTAGGAGGAAGACTATTGA TATTGCCCTCGAGCTCATTACTCCTAGGAACATTGATGAGGTTGTTATGATGCTTAAGAAGGAGGTTGTGAAGACTCAGA GTGGGGAGCATGAGAAGAATGGGGAGTATAGGCAGATGCTGGTGCAAGCTATTCATACTTGTGCTATTAAGTTTCCTGAG GTGGCGAGTACTGTTGTTCATCTCTTGATGGACTTCTTGGGGGATTCCAATGTTGCTTCTGCCATGGATGTGGTTGTGTT TGTGCGTGAGATCATTGAGACTAACCCGAAGCTGCGTGTTTCTATAATCACCAGGCTCTTGGATACTTTCTACCAAATCC GGGCTGCGAGGGTTTGTTCATGTGCTCTGTGGATAATTGGTGAGTATTGCTTGTCACTTTCAGAGGTTGAGAGCGGAATT GCCACTATTAAGCAATGTCTTGGTGACCTCCCATTTTATACTCTCACCGAAGATGGAGAAGGTCAGGACACATCAAAAGC CACACAGCAGGTTAACTCAGGCACTGTGTCCTCTAGGAGGCCTGCAATTCTAGCAGATGGGACCTATGCTACCCAAAGTG CTGCTCTTGAAACTGCCATGTCACCACCTACCCTCGTACAGGGTTCGCTGTCTTCTATTGGGAACTTGAGATCACTGATT CTTTCAGGTGATTTTTTTCTCGGGGCAGTAATTGCGTGCACGCTGACAAAACTTGTTCTGAGGTTGGAAGAGGTTCAGAC TTCAAAAGTTGAAGTTAACAAAGCAACTTCACAGGCCTTATTGATCATGGTTTCAATGCTGCAGCTGGGCCAGTCTTCAG TTCTTCCTCATCCAATTGATAGTGATTCTCATGACAGGATTGTCCTTTGCATTAGATTGCTGTGCAACACGGGTGATGAG ATAAGGAAGATATGGCTGCAATCTTGCAGGGAGAGCTTTGTGAAAATGCTTGCTGATAAGCAGCGCCGTGAGACGGAGGA AATTAAAGCAAAGGCTCAAATATCCAATGCACAGCCTGATGATCTTATTGATTTCTACCATTTGAAGAGCAGAAAGGTAT GACTGTGATGGCTATATTTATTTAAGAAGGATATAACTGAATTATTGTTTTATATTCCTTGAAATTGTTCACCTTGCATG CTTCCATCATTGTTAATGATTGAACTTTTTTGCATTTATTTATAGCAATATCTAGTTGTGATATATTATGCATTGCTTGA AACCATGTTGTTAAACTGGCTGTTGTTTCACCTGGGTATAATTCCTGTTAATTTGTAGGAGCATTTGTTTTGTGTTCAGT TAATATGCTTGCTCATCTGGTAATTTTTTCATATGTTCAATCTGTGCATGCTTATAAAGTTATAATTCTTCAGGGCATGA GCCAACTTGAGCTTGAAGATGAGGTTCAGGATGATCTGAAACGTGCTACTGGAGAGTTTACAAAGGATTCAGATGATGCA AATAAGCTCAATCGCATACTTCAGCTCACTGGATTCAGTGATCCTGTTTATGCCGAAGCATATGTAACAGTGCATCATTA TGACATTGTCCTCGAAGTTACGGTCATCAACCGAACTAAGGAGACCCTCCAGAATTTGTGTTTGGAGTTAGCAACCATGG GGGACCTCAAACTTGTTGAGCGCCCACAAAACTATACTCTAGCTCCAGAATCAAGCAAACAGATTAAGGCCAACATCAAG GTTTCTTCAACTGAAACAGGAGTTATATTCGGTAACATAGTTTATGAGACATCTTCTAATGTTCTTGAGAGAACAGTTAT TGTTCTAAATGATATACATATTGATATCATGGATTACATCTCTCCTGCATCTTGTGCTGATGTGGCCTTCAGAACTATGT GGGCTGAGTTTGAGTGGGAAAACAAGGTATACCTCTGTTTTTATTTTCTCAATTGCCATTTTTTAAACCAAAGGTTAAAA AATTATGGTGCTTCCTTTTATTGCTCTTAGGAATCATCTTTCATTGAAATTTTTTGGGAAAAAACTTTCTGGTACGTTAG AGTCATGGTGAGCTTTTTAAATGAGCACTTAATATTTCTAAGTTTATTCTCTTGAAGTTATCATATTTTTTTACATCATT CTGTCTACAATATTTGCATTGATTATGCTATCTTGAAGGTTGAGATAATGGCATTTTATAATTGACGTTGATTTATTCAT TTTAATACTTTTCCATGGTTATTGTTAATGTTGTTGAAGGTATGTTTGTTTACACTGGTGTTTTATCTTGGTAATAATGT GTACCTGATAGGGTAACATGGCTATTGATCAAGCCTCCCTAGGAATAGGCTAGTGGTGATGGATTTAGGTAGTTTGTTAG AATTTCTAGTCTTGATCCTCCATCTAGTCATTGTTCAAAAATCAACATGTTGAGTAGTTATATTATAGTCTATGGCATGC TGCTGGTCTTTCTGTCGTGATTCTGATAACTATGTGTTAGCCTGTGATGGGTTAAGGACTACTGTCTGTTGCTCCTGTAT CTCTTTTTGGGTTCAAATGGGTAAGGTAGATCTTGGTGGGTTTGATTTCATTTAAAGCTAGGTATCATGCTCTAAATTTT CTAGTAGTTTCCTAGTTTATATAGCAGCCATAACGTTATTAACCTATGTTGTCTTCTCTCTGGCTTATGGCCATTGTTGA GTGACTACAGCTACAAGTATAATATCCCAGAGTGTGATATGCTGATATGGAAAAATTTTAAAACTTAGGAATTTGGATAC ACATAGATTTAGCAAGGCATGTTCAAATATCAAAGAACCTCTCTGATCTATTTTATACATGAAAAAAATACTAGGAATTG AGAAGCATTCCCAACGTCACAAAGAATGAAATACAATATTTTTTCAAGCCATACTGAAGCATATTGAACCCTTAAATATC TGGTATCTACAAGAACACCACAAAATATTTTCTTAAAAACTAACTTGCTGAAATGTAGTTTTACTTATATGCTATAAGTT AAATTTAGAATAGGATAAAATATTATCTTTGAAAGAAATAAACAAAATTATGATACTTATCTGCTAAGCAAAGTAAGTTA ACAAACCACTGAGTTGCTAACTAGTAACTAAGCCTGCTAAACAAAGTTAACAAACCACTGAGTTGCTAACTAGTAACTAT GCCTGCTAAACAAGGTTAACAAACCAGAGTTGCTAACTAGTAACTATGCTTAACATCAAACAATAGGAATGGGTAATAAA ATGAAGGAAAATCACTTTTAGGCTTCTATAATGGTTTGATTTGAAGCTTCAGAAGCTGCTCAGGAAAATTAGCTAGGAAG CTAAAAATAAGTATCCAAGTTGGATATGCCGACAAAGAAATGATTGAATCATTACAGATTTGAGCTATACTCACTGTAAT TTTGGAGTTTTCTGCATCGGCTAGTATCAGCTTTCTGTTGATACAGGATGGTTCTTTATTGTCTCAAGTCAAGCCAAATC CTTCTTCTATGCACCCATATCAACATGTCAATCTTTTAGATGTACTTAGTACTTAGTAATACAAGTATGATACCAAAATC GACACAACATCGGAAGTTATAACTTATAACATAAGCATGAATGTGTACTTGGGCAAGAAACACAACAACTTGATGATGTG TCTGATTCTTTTATTAACATTACTATGTTTTAGGTTGCTGTAAATACAGTATTGCAAGATGAGAGGGATTTTCTGAGCCA CATCATCAAGTCAACTAATATGAAATGCCTGACCCCACCGTAAGTTCTCCAACTCTGCCTGGTTCTAATTTCACTCATGA AAGGTTATCTGTATCACTTTTGAACACAACACTTTCTGGTAATTATTGTGTCTGTATGCGCTCCGCCATGTTTTCCTGAG CATCTACTTCCTGGATTTTATTTTTCTGTGCTTTTTGAAGTTAAATGTTTTAAATTGAGTTTGAAAAATAACTCTTAAAA AGTTTATATCTTCTTGAATCTTCATCAGTGGCATTTACTCATGAATAGTCAATGTCGACTAGATAAGCTTTCCAATGCTG ATGTTTTCTGCATCTTTGCCACTTATTTGCCAATCTATATCTTTAATGAACCCAAATTTTAACATTGCTTATTCAAATTG GTAAAACATTCTAATTTGTCTTTGTCAGGGACATGAGATTTATTTTTGACAAATACTTCCCTTACAACATCATTGTAACA AATTGTAAACTAATCGTGGATTCATTAATATTTTAACATTTCATGTAATTGATATGTCGTGCTTTGTTACATTTTGATTT GATGTTATATCTTGATTTGACCAAGACCAAGGCGTGTGATTAATTTGGTTTTCATTTCTCTTTTCAGATCTGCATTGGAA GGGGATTGTGGTTTCCTAGCTGCAAACCTTTATGCTAAGAGTGTCTTTGGGGAAGATGCTTTAGTGAATGTGAGCATTGA AAAGCAAGCAGATGGTAAGTTGAGTGGATACATCAGGATAAGAAGTAAAACCCAGGGAATCGCCCTCAGTCTTGGGGATA AGATAACTTTGAAACAGAAAGGAGCCGCTTGATAGGAGCAAATGCCCCATTTTCTCTTATGCTTCCTTGCTTGTATGTCT TCTTATCAACTCTGTGCAGCTTCTGGTGGCAGCTAACTTCAAGCTTGATTATTGCTTCAGATTCTTGTGGCTTTGGTAGC AGCCAACTCGTTAGTATTAATTTTCTCTTTTGAGGTTCCATTTTTGTCTGTATTCTTTCCTTGGATGTTACTTAAGAAAA ATCCTTATTACCCATCTTTTATTTTTCTATACATGAATTTGGGACACCGTATATTGATATGAGAATCAATCATTGACTAT TTGTTCTGGCAGCCCGTAATGATAACGGTAGTTTTTATGTGAATTATTAGTTCCATAGCAGTCATGAATAAATTGTAATT TTGATTTGCCTTTTCCCGCGTTCTTTTTTTGTGTTTCTCCTTAATTAGTACCTTCAAATATCACTAGTTGTTAGTATTCT GGCATTCTGCATAATTAGGGTTTTAAGGTTATCATCCTTCATCACTTTGGGAACTTAAGACATACGATTCTCAAATTTCT AGTTCTTGTCTCCCATCATATAGGTTAGGGGTTTGTTCCTTGACAATAGATATGGAACATATTTTGTGACAAGTTGTCTA TTGCTTAGTGTGAGCACTTGTGACATTCACTGTTATCGATGGTAGCTAGTCTTCGTATTTTGAAGCATAAAGGTTATTAC CTCCTTGAGTATGTTCACCCAAGCATGAATTGAGGTATAGATTAAGCTTCAACGGATATCTATAAGGTAGCAGCAAGAGG CTTTGATACCAAATGATATGAATTGGAGCTCCATTCCCCATGGTTTTTTAAACATTTTGGTACCTCCTTAAAGTAGTCAC CAATGAACAAAATGAAAGTGAATAGGAATGGAGGTGCCACTATCTTCACGATCTAAAAAAAAATGTAGATGAATGATAAC TCAAGGTAGATGAGATTATGAGAAGGTACAAGGGCTTTTACATCTTTGATTTTTAAAAGAAAGAGGTCTCACAAGAGATT TACTGTTGAAAACTTGAAGAATTTCCTCTAAACTCACGTAATTCAACTATGAATTATCATCAAAGTTGTGGAAATATACA AAGCATCATCCCATATACAGGGATGTGGCGC
CDS sequence (LotjaGi3g1v0344700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGAAATCGTGCAGTTTGGTGGTGCACTTCGACAAGGGAACGCCGGCACTAGCCAACGAGATCAAGGAATCTCTCGA AGGAAACGACGTCGGAGCCAAGATCGACGCGCTCAAGAAAGCGATCATGCTCCTCCTCAACGGCGAAACCATCCCTCAGC TCTTCATCACCATAATCCGCTACGTTCTCCCCTCCGAGGACCACACCGTGCAGAAGCTCCTCCTTCTCTACCTCGAGATC ATTGACAAAACCGATTCCCGCGGCAAGGTTCTCCCGGAGATGATCCTCATCTGCCAGAATCTCCGCAACAACCTCCAGCA CCCTAACGAGTACATCCGCGGTGTCACCCTCCGCTTCCTCTGCCGTCTCAACGAATCCGAGATCATCGAGCCTCTCATCC CTTCGATTCTCTCCAATCTCGAGCACCGCCACCCCTTCGTCCGCCGCAACGCCGTCCTCGCTATCATGTCTGTGTACAAG CTCCCCCAGGGCGAGCAGCTTCTCGATTCCGCGCCGGAGATCGTTGAGAAGTTTCTCTCCACCGAGCAGGACCCTTCCAG CAAGCGCAACGCGTTTCTCATGCTGTTTTCATGCGCGCAGGATCGCGCTATCAATTACCTTCTCAGCAACATTGAGAGGA TCACTGATTGGGGTGAGCAGCTTCAGATGGTGGTGCTGGAGCTGATTCGGAAGGTTTGCAGGAACAATAAGGGTGAGAAA GGGAAGTATATTAAGATTATTATATCATTGTTGAATGCACCTTCTGCTGCTGTTATTTATGAATGTGCTAGTACTCTTGT GTCGCTTTCTTCGGCTCCGACCGCGATTAAAGCGGCGGCGAGCACTTACTGCCAGCTTTTGCTTTCTCAGAGCGATAACA ATGTGAAGCTTATTGTGCTTGATCGCCTGAATGAGCTTAAGAGCTCTAACAGGGAGATCATGGTTGAGATGGTGATGGAT GTCCTCAGGGCACTGTCCACCCCAAACCCTGATATTAGGAGGAAGACTATTGATATTGCCCTCGAGCTCATTACTCCTAG GAACATTGATGAGGTTGTTATGATGCTTAAGAAGGAGGTTGTGAAGACTCAGAGTGGGGAGCATGAGAAGAATGGGGAGT ATAGGCAGATGCTGGTGCAAGCTATTCATACTTGTGCTATTAAGTTTCCTGAGGTGGCGAGTACTGTTGTTCATCTCTTG ATGGACTTCTTGGGGGATTCCAATGTTGCTTCTGCCATGGATGTGGTTGTGTTTGTGCGTGAGATCATTGAGACTAACCC GAAGCTGCGTGTTTCTATAATCACCAGGCTCTTGGATACTTTCTACCAAATCCGGGCTGCGAGGGTTTGTTCATGTGCTC TGTGGATAATTGGTGAGTATTGCTTGTCACTTTCAGAGGTTGAGAGCGGAATTGCCACTATTAAGCAATGTCTTGGTGAC CTCCCATTTTATACTCTCACCGAAGATGGAGAAGGTCAGGACACATCAAAAGCCACACAGCAGGTTAACTCAGGCACTGT GTCCTCTAGGAGGCCTGCAATTCTAGCAGATGGGACCTATGCTACCCAAAGTGCTGCTCTTGAAACTGCCATGTCACCAC CTACCCTCGTACAGGGTTCGCTGTCTTCTATTGGGAACTTGAGATCACTGATTCTTTCAGGTGATTTTTTTCTCGGGGCA GTAATTGCGTGCACGCTGACAAAACTTGTTCTGAGGTTGGAAGAGGTTCAGACTTCAAAAGTTGAAGTTAACAAAGCAAC TTCACAGGCCTTATTGATCATGGTTTCAATGCTGCAGCTGGGCCAGTCTTCAGTTCTTCCTCATCCAATTGATAGTGATT CTCATGACAGGATTGTCCTTTGCATTAGATTGCTGTGCAACACGGGTGATGAGATAAGGAAGATATGGCTGCAATCTTGC AGGGAGAGCTTTGTGAAAATGCTTGCTGATAAGCAGCGCCGTGAGACGGAGGAAATTAAAGCAAAGGCTCAAATATCCAA TGCACAGCCTGATGATCTTATTGATTTCTACCATTTGAAGAGCAGAAAGGGCATGAGCCAACTTGAGCTTGAAGATGAGG TTCAGGATGATCTGAAACGTGCTACTGGAGAGTTTACAAAGGATTCAGATGATGCAAATAAGCTCAATCGCATACTTCAG CTCACTGGATTCAGTGATCCTGTTTATGCCGAAGCATATGTAACAGTGCATCATTATGACATTGTCCTCGAAGTTACGGT CATCAACCGAACTAAGGAGACCCTCCAGAATTTGTGTTTGGAGTTAGCAACCATGGGGGACCTCAAACTTGTTGAGCGCC CACAAAACTATACTCTAGCTCCAGAATCAAGCAAACAGATTAAGGCCAACATCAAGGTTTCTTCAACTGAAACAGGAGTT ATATTCGGTAACATAGTTTATGAGACATCTTCTAATGTTCTTGAGAGAACAGTTATTGTTCTAAATGATATACATATTGA TATCATGGATTACATCTCTCCTGCATCTTGTGCTGATGTGGCCTTCAGAACTATGTGGGCTGAGTTTGAGTGGGAAAACA AGGTTGCTGTAAATACAGTATTGCAAGATGAGAGGGATTTTCTGAGCCACATCATCAAGTCAACTAATATGAAATGCCTG ACCCCACCATCTGCATTGGAAGGGGATTGTGGTTTCCTAGCTGCAAACCTTTATGCTAAGAGTGTCTTTGGGGAAGATGC TTTAGTGAATGTGAGCATTGAAAAGCAAGCAGATGGTAAGTTGAGTGGATACATCAGGATAAGAAGTAAAACCCAGGGAA TCGCCCTCAGTCTTGGGGATAAGATAACTTTGAAACAGAAAGGAGCCGCTTGA
Protein sequence (LotjaGi3g1v0344700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEKSCSLVVHFDKGTPALANEIKESLEGNDVGAKIDALKKAIMLLLNGETIPQLFITIIRYVLPSEDHTVQKLLLLYLEI IDKTDSRGKVLPEMILICQNLRNNLQHPNEYIRGVTLRFLCRLNESEIIEPLIPSILSNLEHRHPFVRRNAVLAIMSVYK LPQGEQLLDSAPEIVEKFLSTEQDPSSKRNAFLMLFSCAQDRAINYLLSNIERITDWGEQLQMVVLELIRKVCRNNKGEK GKYIKIIISLLNAPSAAVIYECASTLVSLSSAPTAIKAAASTYCQLLLSQSDNNVKLIVLDRLNELKSSNREIMVEMVMD VLRALSTPNPDIRRKTIDIALELITPRNIDEVVMMLKKEVVKTQSGEHEKNGEYRQMLVQAIHTCAIKFPEVASTVVHLL MDFLGDSNVASAMDVVVFVREIIETNPKLRVSIITRLLDTFYQIRAARVCSCALWIIGEYCLSLSEVESGIATIKQCLGD LPFYTLTEDGEGQDTSKATQQVNSGTVSSRRPAILADGTYATQSAALETAMSPPTLVQGSLSSIGNLRSLILSGDFFLGA VIACTLTKLVLRLEEVQTSKVEVNKATSQALLIMVSMLQLGQSSVLPHPIDSDSHDRIVLCIRLLCNTGDEIRKIWLQSC RESFVKMLADKQRRETEEIKAKAQISNAQPDDLIDFYHLKSRKGMSQLELEDEVQDDLKRATGEFTKDSDDANKLNRILQ LTGFSDPVYAEAYVTVHHYDIVLEVTVINRTKETLQNLCLELATMGDLKLVERPQNYTLAPESSKQIKANIKVSSTETGV IFGNIVYETSSNVLERTVIVLNDIHIDIMDYISPASCADVAFRTMWAEFEWENKVAVNTVLQDERDFLSHIIKSTNMKCL TPPSALEGDCGFLAANLYAKSVFGEDALVNVSIEKQADGKLSGYIRIRSKTQGIALSLGDKITLKQKGAA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 549 | 549 | - | – | |
| PIRSF | 1 | 950 | 950 | 0.0 | ||
| PANTHER | 1 | 948 | 948 | 0.0 | ||
| Gene3D | 10 | 488 | 479 | 4.2E-96 | ||
| SUPERFAMILY | 16 | 639 | 624 | 6.08E-82 | ||
| Pfam | 21 | 466 | 446 | 2.5E-92 | ||
| Phobius | 550 | 571 | 22 | - | – | |
| Phobius | 572 | 950 | 379 | - | – | |
| Pfam | 670 | 808 | 139 | 3.7E-59 | ||
| Pfam | 815 | 942 | 128 | 5.5E-58 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Structural molecule activity | The action of a molecule that contributes to the structural integrity of a complex or its assembly within or outside a cell. | ||
| Cellular component | Cytoplasm | All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. | ||
| Biological process | Intracellular protein transport | The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell. | ||
| Biological process | Vesicle-mediated transport | A cellular transport process in which transported substances are moved in membrane-bounded vesicles; transported substances are enclosed in the vesicle lumen or located in the vesicle membrane. The process begins with a step that directs a substance to the forming vesicle, and includes vesicle budding and coating. Vesicles are then targeted to, and fuse with, an acceptor membrane. | ||
| Cellular component | Membrane coat | Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules. | ||
| Cellular component | COPI vesicle coat | One of two multimeric complexes that forms a membrane vesicle coat. The mammalian COPI subunits are called alpha-, beta-, beta'-, gamma-, delta-, epsilon- and zeta-COP. Vesicles with COPI coats are found associated with Golgi membranes at steady state. |
Expression pattern of LotjaGi3g1v0344700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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