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LotjaGi3g1v0346400.1

Overview

Field Value
Gene ID LotjaGi3g1v0346400
Transcript ID LotjaGi3g1v0346400.1
Related isoforms 3
Lotus japonicus genome version Gifu v1.2
Description Protein kinase; TAIR: AT2G38620.2 cyclin-dependent kinase B1;2; Swiss-Prot: sp|Q38774|CDC2C_ANTMA Cell division control protein 2 homolog C; TrEMBL-Plants: tr|A0A1J7HW96|A0A1J7HW96_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0346400
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:72413354..72416909) extracted from Lotus japonicus Gifu genome v1.2.

CTTTGTCGCGTTGTCTTTATCACTTCTATGCCCCGCTAATTCCTTAACAAGACAATCTTTTTGCATTATCCATTCCTATT TAGATTGAAGAGGTTCCTTCAAATATCATATCGCGTATCTCTATTTATTTGGCATGATGTATTGACCTTCCTCTTTTCAA ATTTTCTTTATATAACTATTCTGAAACGGCACAACGTTTGGAAATTTGAAAAACAGAAGGGCGCTCTCACACTCCAGATC CAAAACTGCCCGTTATACCCACCCACCGCTCCTCTCCCTTTTCATTTCACTCTCCGCTCCTCTTCTTTTCTCTCTGCATT TTCTCTGAATCGATTCCAGAAATGGAAAACTACGAGAAACTGGAGAAGGTAGGAGAAGGCACATACGGCAAAGTCTACAA AGCCAAAGAGAAATCCACCGGCCAAGTCGTCGCTCTCAAGAAAACCCGTCTCGAGATGGACGAAGAAGGCGTCCCTCCGA CCGCCCTCCGCGAAGTCTCCCTCCTCCAGATGCTCTCCCAATCCATCTACATCGTCCGCCTCCTCAAAGTCGAGCACGTC GACAAAACCCCCAAAAACAACAACCACCACCCCTCCGCCGCCGCCGACCACCCTCCTCCGCCGTCTAAACCCCTCCTCTA CCTCGTCTTCGAGTACCTCGACACCGATCTCAAGAAATACATCGATACCTACCGCAAGGGGCCAAACCCTAGGCCGCTTC CGCCTACTTTGATTCAGAGTTTTCTGTTTCAGCTCTGTATGGGTGTTGCGCATTGTCATAGTCACGGTGTTCTCCACCGC GATCTCAAGCCGCAGAATCTTCTGCTTGATCAGCAGAAGGGGATTCTCAAGATTGCTGATCTTGGGCTTGGTCGCGCTTT TACTGTTCCTCTCAAGAGCTATACTCATGAGATTGTTACTCTCTGGTATAGGGCGCCGGAGGTTCTTCTCGGTTCGACGC ATTACTCCACCGGTGTTGATATGTGGTCTGTTGGTTGCATTTTTGGTGAGAATTCACACTCATTCCTTTCAATTCGCGAC ATTATAGGGTTACATTAGGGATTGCTATTAGGTTATGAACTGTGGGAAAGTAATTAGGTTTTGATATGGATTTTAACATT TGGGGGGGATTATTATTGTCAATTGGGAAATTCAGGGTGTTTGCAACATTATCTAAACTTTTACTGCATAAGGGTTTGTT GGGAAAATCAGAGTCTCTACTTTGATGCTGGCGAAATTACACTTATTCATTGTTTTGTTATGTAGCTGAGATGGCGAGAA GGCAAGCTCTGTTTCCGGGGGATTCTGAATTCCAGCAGCTCCTTAACATTTTCAAGTATGTCACTGACTCTGCTCCATTG TTATCAAATAGCGGCACCACTATAGCGTAGCGGATTTTTGGCTAATTGCGACGCCGCTATTGCCTACTATAGCGTGCTAT TTGCCGCTAAATAGCGGCCGAAATAGCAGATTTTTGGCTCACCACGATGGTCCGCGATCGCGATTTGACTACACTGCTTT GCTCAGTGCTTGCATTGCATATTTGTAGGAATCTATGTTTTTTCAATTTTATTTTAAGGGGGTTTTCATGATTTTTTTAT TTTTTTTACATTCTACCTCATACATCTGCTTGCTTGATACTGAGTATTCGTTTTTTATCTTGAGAGTGGGAGGGTAAAGG TTGAGTAGGTAAGAAAAATAAATGTGAATGAAATATTGATCTTGTTGCAATGTATGGCTAGAATGCAAATAAGTTGAGTG AAAAAGTCAGCCATGTGGGTATCCTATAGGAAAAAGATTTGTAGATCCTATATACACATGGAATGAGAGTGATGGGAGAG GAAAAAAGAGAAGTGAAAGATGTAGTATGTGTTATAGCATGATGGGAAAAGAGAGATTGAAAAATAAACGAGAGGTGGAT GAAAGGTGAAAATAGGTAGGTGTCTAGATATCAAAGTTATACCGTTTATATATATTGGAAGAATGTGCCCACCTACCTTT TGGATGGATCCACCACTCTAGGGGAGATAGGAAGGAAAAGTGAGTTTGTACTTTGTATTATTTATGCTACCTTTGATTAA AAAAAAAACACTTTTATTTCAAACCATTGGGAGAGATGGATTTTGATTAAAACTGCTGACGGAAATTCAAAGTAGTGTGA AAATGAGAAATTGACGTGAGTGTAAAAGGATGAGTGAATAAATATCAAAATTCTTTTTAGATCTCATATTTCCATCTGTT TCATACGTTTTTTTCCATTCTAAACTCAACTGTGCTGGTGTTTGATTTACTAACTGTGGTCTAATCCTTGAAGGGTTTTG GGTACTCCAACGGAAGAGCAATGGCCAGGAGTTACTTCGCTGCGTGATTGGCATGTGTACCCTCGGTGGGAGCCTCAGAC ATTGGCAAGGGCTGTGCCCTCTTTAGGACCTGAGGGTGTGGACCTTCTCTCGGTCAGTATTCCTCTTTAACTTAAAATTT GCTTTATGTTTGTGAGTTGATAAAATATGCCTCTTAAGAACAAGTCAACATAACAGAAACACTTGGAACAAGAAAAACAT CAAATCATAATGGATTCTCTGTATCTTTTTTCTGCTCTGAGATGAACCAACAAAATCATTCTATGAGACCTTTGAAAATG CATTTGAAATGGAAGATTAGGCTCCTTTAATTACCTATGTAGCATAGATGTTCTGCACTTCTTCATTTTGATCCCAATAT ATCATTTCCATTTTTAAGACACTCAAACCTTAACCGAACTGCTGTGTACACCCTATTTTTCCTTTTATCTCTCTTTCTAT CACATTATATCATATATTACTTGTTTCTCTTCACTTCCTTCCTTTCTTTCTTTATCTAATATGATTGTCTACACCGAAAG TGGGTGTCTATGAAACCACATGATAATTACTCGACCATGCATAGTAGGCATGTGCCTTAGGCTGCATTGAAGTGTTGGTC TGAATTTATGATATGATATGATTATGTATATTCTAATTCATCTAACTAGACTGCACGCCGCCTTCACTTCACTTTCACCA TGTTCAGTAATGTGTGTTCTTTTTCTTCCCCACCAAACTGAGAGTAATTGTATGCAATTATACACCTGCAGAAAATGCTC AAGTACAATCCTGCTGATAGAATTTCTGCCAAAGCAGCACTTGATCATCCCTACTTTGATACTCTTGACAAGTCTCAATA TTGATGATGACTCTAGTCAGAAGGTTTTGTGCAGAGGCAACTGTTAAGCAATATCATGTCAGTTAATGAAAATTAATTCT TGGCGTGGCATTGTGTTTAAGAATCTGTCGAAATGGTGTTATGTAATATTTTGTCATCATCTTGGTGATTGTAACAGTTT ACTTTTGGGGCATTACATTGCCATGGTCTCTATTTTGAACCCTTGAACTTTATGCTCCTCTAAAGTTGTATTATCTGTTG AACATGGATGGGCTTGTCCATGAGTGTGCCATTAACCAAGTCTATGCTTAATACTTTTAAAGGTTTTATTTTTGGCAAAA TATTTTCTGTTTTATTTCAGTCATCAATTATATCAA
Download Genomic Sequence

CDS sequence (LotjaGi3g1v0346400.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGAAAACTACGAGAAACTGGAGAAGGTAGGAGAAGGCACATACGGCAAAGTCTACAAAGCCAAAGAGAAATCCACCGG CCAAGTCGTCGCTCTCAAGAAAACCCGTCTCGAGATGGACGAAGAAGGCGTCCCTCCGACCGCCCTCCGCGAAGTCTCCC TCCTCCAGATGCTCTCCCAATCCATCTACATCGTCCGCCTCCTCAAAGTCGAGCACGTCGACAAAACCCCCAAAAACAAC AACCACCACCCCTCCGCCGCCGCCGACCACCCTCCTCCGCCGTCTAAACCCCTCCTCTACCTCGTCTTCGAGTACCTCGA CACCGATCTCAAGAAATACATCGATACCTACCGCAAGGGGCCAAACCCTAGGCCGCTTCCGCCTACTTTGATTCAGAGTT TTCTGTTTCAGCTCTGTATGGGTGTTGCGCATTGTCATAGTCACGGTGTTCTCCACCGCGATCTCAAGCCGCAGAATCTT CTGCTTGATCAGCAGAAGGGGATTCTCAAGATTGCTGATCTTGGGCTTGGTCGCGCTTTTACTGTTCCTCTCAAGAGCTA TACTCATGAGATTGTTACTCTCTGGTATAGGGCGCCGGAGGTTCTTCTCGGTTCGACGCATTACTCCACCGGTGTTGATA TGTGGTCTGTTGGTTGCATTTTTGCTGAGATGGCGAGAAGGCAAGCTCTGTTTCCGGGGGATTCTGAATTCCAGCAGCTC CTTAACATTTTCAAGGTTTTGGGTACTCCAACGGAAGAGCAATGGCCAGGAGTTACTTCGCTGCGTGATTGGCATGTGTA CCCTCGGTGGGAGCCTCAGACATTGGCAAGGGCTGTGCCCTCTTTAGGACCTGAGGGTGTGGACCTTCTCTCGAAAATGC TCAAGTACAATCCTGCTGATAGAATTTCTGCCAAAGCAGCACTTGATCATCCCTACTTTGATACTCTTGACAAGTCTCAA TATTGA
Download CDS Sequence

Protein sequence (LotjaGi3g1v0346400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MENYEKLEKVGEGTYGKVYKAKEKSTGQVVALKKTRLEMDEEGVPPTALREVSLLQMLSQSIYIVRLLKVEHVDKTPKNN NHHPSAAADHPPPPSKPLLYLVFEYLDTDLKKYIDTYRKGPNPRPLPPTLIQSFLFQLCMGVAHCHSHGVLHRDLKPQNL LLDQQKGILKIADLGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTGVDMWSVGCIFAEMARRQALFPGDSEFQQL LNIFKVLGTPTEEQWPGVTSLRDWHVYPRWEPQTLARAVPSLGPEGVDLLSKMLKYNPADRISAKAALDHPYFDTLDKSQ Y
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR24056:SF429
1 321 321 3.7E-175 –
SUPERFAMILY
SSF56112
1 316 316 7.96E-92
IPR011009
PANTHER
PTHR24056
1 321 321 3.7E-175 –
Gene3D
G3DSA:3.30.200.20
1 107 107 1.0E-26 –
SMART
SM00220
4 313 310 1.1E-95
IPR000719
Pfam
PF00069
4 313 310 2.2E-65
IPR000719
ProSiteProfiles
PS50011
4 313 310 43.58
IPR000719
ProSitePatterns
PS00107
10 33 24 -
IPR017441
MobiDBLite
mobidb-lite
75 94 20 - –
Gene3D
G3DSA:1.10.510.10
108 321 214 4.8E-68 –
ProSitePatterns
PS00108
150 162 13 -
IPR008271

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0346400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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