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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0346400 |
| Transcript ID | LotjaGi3g1v0346400.4 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein kinase; TAIR: AT2G38620.4 cyclin-dependent kinase B1;2; Swiss-Prot: sp|P25859|CKB11_ARATH Cyclin-dependent kinase B1-1; TrEMBL-Plants: tr|A0A0B0NVI6|A0A0B0NVI6_GOSAR Cyclin-dependent kinase B1-2-like protein; Found in the gene: LotjaGi3g1v0346400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:72413695..72416557) extracted from Lotus japonicus Gifu genome v1.2.
ATGGAAAACTACGAGAAACTGGAGAAGGTAGGAGAAGGCACATACGGCAAAGTCTACAAAGCCAAAGAGAAATCCACCGG CCAAGTCGTCGCTCTCAAGAAAACCCGTCTCGAGATGGACGAAGAAGGCGTCCCTCCGACCGCCCTCCGCGAAGTCTCCC TCCTCCAGATGCTCTCCCAATCCATCTACATCGTCCGCCTCCTCAAAGTCGAGCACGTCGACAAAACCCCCAAAAACAAC AACCACCACCCCTCCGCCGCCGCCGACCACCCTCCTCCGCCGTCTAAACCCCTCCTCTACCTCGTCTTCGAGTACCTCGA CACCGATCTCAAGAAATACATCGATACCTACCGCAAGGGGCCAAACCCTAGGCCGCTTCCGCCTACTTTGATTCAGAGTT TTCTGTTTCAGCTCTGTATGGGTGTTGCGCATTGTCATAGTCACGGTGTTCTCCACCGCGATCTCAAGCCGCAGAATCTT CTGCTTGATCAGCAGAAGGGGATTCTCAAGATTGCTGATCTTGGGCTTGGTCGCGCTTTTACTGTTCCTCTCAAGAGCTA TACTCATGAGATTGTTACTCTCTGGTATAGGGCGCCGGAGGTTCTTCTCGGTTCGACGCATTACTCCACCGGTGTTGATA TGTGGTCTGTTGGTTGCATTTTTGGTGAGAATTCACACTCATTCCTTTCAATTCGCGACATTATAGGGTTACATTAGGGA TTGCTATTAGGTTATGAACTGTGGGAAAGTAATTAGGTTTTGATATGGATTTTAACATTTGGGGGGGATTATTATTGTCA ATTGGGAAATTCAGGGTGTTTGCAACATTATCTAAACTTTTACTGCATAAGGGTTTGTTGGGAAAATCAGAGTCTCTACT TTGATGCTGGCGAAATTACACTTATTCATTGTTTTGTTATGTAGCTGAGATGGCGAGAAGGCAAGCTCTGTTTCCGGGGG ATTCTGAATTCCAGCAGCTCCTTAACATTTTCAAGTATGTCACTGACTCTGCTCCATTGTTATCAAATAGCGGCACCACT ATAGCGTAGCGGATTTTTGGCTAATTGCGACGCCGCTATTGCCTACTATAGCGTGCTATTTGCCGCTAAATAGCGGCCGA AATAGCAGATTTTTGGCTCACCACGATGGTCCGCGATCGCGATTTGACTACACTGCTTTGCTCAGTGCTTGCATTGCATA TTTGTAGGAATCTATGTTTTTTCAATTTTATTTTAAGGGGGTTTTCATGATTTTTTTATTTTTTTTACATTCTACCTCAT ACATCTGCTTGCTTGATACTGAGTATTCGTTTTTTATCTTGAGAGTGGGAGGGTAAAGGTTGAGTAGGTAAGAAAAATAA ATGTGAATGAAATATTGATCTTGTTGCAATGTATGGCTAGAATGCAAATAAGTTGAGTGAAAAAGTCAGCCATGTGGGTA TCCTATAGGAAAAAGATTTGTAGATCCTATATACACATGGAATGAGAGTGATGGGAGAGGAAAAAAGAGAAGTGAAAGAT GTAGTATGTGTTATAGCATGATGGGAAAAGAGAGATTGAAAAATAAACGAGAGGTGGATGAAAGGTGAAAATAGGTAGGT GTCTAGATATCAAAGTTATACCGTTTATATATATTGGAAGAATGTGCCCACCTACCTTTTGGATGGATCCACCACTCTAG GGGAGATAGGAAGGAAAAGTGAGTTTGTACTTTGTATTATTTATGCTACCTTTGATTAAAAAAAAAACACTTTTATTTCA AACCATTGGGAGAGATGGATTTTGATTAAAACTGCTGACGGAAATTCAAAGTAGTGTGAAAATGAGAAATTGACGTGAGT GTAAAAGGATGAGTGAATAAATATCAAAATTCTTTTTAGATCTCATATTTCCATCTGTTTCATACGTTTTTTTCCATTCT AAACTCAACTGTGCTGGTGTTTGATTTACTAACTGTGGTCTAATCCTTGAAGGGTTTTGGGTACTCCAACGGAAGAGCAA TGGCCAGGAGTTACTTCGCTGCGTGATTGGCATGTGTACCCTCGGTGGGAGCCTCAGACATTGGCAAGGGCTGTGCCCTC TTTAGGACCTGAGGGTGTGGACCTTCTCTCGGTCAGTATTCCTCTTTAACTTAAAATTTGCTTTATGTTTGTGAGTTGAT AAAATATGCCTCTTAAGAACAAGTCAACATAACAGAAACACTTGGAACAAGAAAAACATCAAATCATAATGGATTCTCTG TATCTTTTTTCTGCTCTGAGATGAACCAACAAAATCATTCTATGAGACCTTTGAAAATGCATTTGAAATGGAAGATTAGG CTCCTTTAATTACCTATGTAGCATAGATGTTCTGCACTTCTTCATTTTGATCCCAATATATCATTTCCATTTTTAAGACA CTCAAACCTTAACCGAACTGCTGTGTACACCCTATTTTTCCTTTTATCTCTCTTTCTATCACATTATATCATATATTACT TGTTTCTCTTCACTTCCTTCCTTTCTTTCTTTATCTAATATGATTGTCTACACCGAAAGTGGGTGTCTATGAAACCACAT GATAATTACTCGACCATGCATAGTAGGCATGTGCCTTAGGCTGCATTGAAGTGTTGGTCTGAATTTATGATATGATATGA TTATGTATATTCTAATTCATCTAACTAGACTGCACGCCGCCTTCACTTCACTTTCACCATGTTCAGTAATGTGTGTTCTT TTTCTTCCCCACCAAACTGAGAGTAATTGTATGCAATTATACACCTGCAGAAAATGCTCAAGTACAATCCTGCTGATAGA ATTTCTGCCAAAGCAGCACTTGATCATCCCTACTTTGATACTCTTGACAAGTCTCAATATTGA
CDS sequence (LotjaGi3g1v0346400.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAAACTACGAGAAACTGGAGAAGGTAGGAGAAGGCACATACGGCAAAGTCTACAAAGCCAAAGAGAAATCCACCGG CCAAGTCGTCGCTCTCAAGAAAACCCGTCTCGAGATGGACGAAGAAGATACCTACCGCAAGGGGCCAAACCCTAGGCCGC TTCCGCCTACTTTGATTCAGAGTTTTCTGTTTCAGCTCTGTATGGGTGTTGCGCATTGTCATAGTCACGGTGTTCTCCAC CGCGATCTCAAGCCGCAGAATCTTCTGCTTGATCAGCAGAAGGGGATTCTCAAGATTGCTGATCTTGGGCTTGGTCGCGC TTTTACTGTTCCTCTCAAGAGCTATACTCATGAGATTGTTACTCTCTGGTATAGGGCGCCGGAGGTTCTTCTCGGTTCGA CGCATTACTCCACCGGTGTTGATATGTGGTCTGTTGGTTGCATTTTTGCTGAGATGGCGAGAAGGCAAGCTCTGTTTCCG GGGGATTCTGAATTCCAGCAGCTCCTTAACATTTTCAAGGTTTTGGGTACTCCAACGGAAGAGCAATGGCCAGGAGTTAC TTCGCTGCGTGATTGGCATGTGTACCCTCGGTGGGAGCCTCAGACATTGGCAAGGGCTGTGCCCTCTTTAGGACCTGAGG GTGTGGACCTTCTCTCGAAAATGCTCAAGTACAATCCTGCTGATAGAATTTCTGCCAAAGCAGCACTTGATCATCCCTAC TTTGATACTCTTGACAAGTCTCAATATTGA
Protein sequence (LotjaGi3g1v0346400.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MENYEKLEKVGEGTYGKVYKAKEKSTGQVVALKKTRLEMDEEDTYRKGPNPRPLPPTLIQSFLFQLCMGVAHCHSHGVLH RDLKPQNLLLDQQKGILKIADLGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTGVDMWSVGCIFAEMARRQALFP GDSEFQQLLNIFKVLGTPTEEQWPGVTSLRDWHVYPRWEPQTLARAVPSLGPEGVDLLSKMLKYNPADRISAKAALDHPY FDTLDKSQY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 48 | 48 | 1.3E-14 | – | |
| SUPERFAMILY | 1 | 244 | 244 | 2.7E-79 | ||
| ProSiteProfiles | 1 | 241 | 241 | 31.849 | ||
| PANTHER | 1 | 42 | 42 | 8.9E-139 | – | |
| PANTHER | 1 | 42 | 42 | 8.9E-139 | – | |
| SMART | 4 | 241 | 238 | 1.2E-65 | ||
| ProSitePatterns | 10 | 33 | 24 | - | ||
| PANTHER | 43 | 249 | 207 | 8.9E-139 | – | |
| PANTHER | 43 | 249 | 207 | 8.9E-139 | – | |
| Gene3D | 49 | 249 | 201 | 3.2E-68 | – | |
| Pfam | 55 | 241 | 187 | 1.7E-46 | ||
| ProSitePatterns | 78 | 90 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi3g1v0346400.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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