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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0350100 |
| Transcript ID | LotjaGi3g1v0350100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Cinnamoyl-CoA reductase; TAIR: AT1G15950.1 cinnamoyl coa reductase 1; Swiss-Prot: sp|Q9S9N9|CCR1_ARATH Cinnamoyl-CoA reductase 1; TrEMBL-Plants: tr|I1KGT7|I1KGT7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0350100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:72823661..72828554) extracted from Lotus japonicus Gifu genome v1.2.
GTTTGCATCTCCCATCCATCTATAATTCCTCTCTCTTTAATTAGTCCTTCTATCTAATATTAATCAAGTGGGAACAAATG GAGATCCCTGTTGATACTTCATCAGTTTCCGGCCACACCGTGTGTGTCACCGGCGCTGGCGGGTTCATTGCCTCCTGGCT GGTCAAACTTCTCTTGGAGAAAGGCTACATCGTTAGGGGAACCGTGAGAAACCCAGGCATGATACATACGATTATGCACA CATAGGATGTGCATGTTTACATGACATGATGTCTTTTCCTGCATGTTATAAATTTATTTTATTTAACGTTGTTTAGATTA ATTACTTATGTTATTTCTAACATGGAGAATACGTTATGCTTGGATTTTGGTTATCATCAGATGATCCAAAGAATGGTCAC CTGAAAGAGTTGGAAGGAGCCAGGGAGAGGCTAACTCTACATAAGGCTAATCTCCTTGATCTTGATTCTCTTAAACATGT CTTTCATGGTTGCGATGGTATCTTCCACACTGCCTCTCCTGTCACTGAAAACCCTGTGAGCTCTCTTTCTTATCCCTAAT AAAGATGTAGTTATGATAGCTGCACACACCAACACACATGCACTTCATTTTCTTCCTATGTTATATCACATTATAAACCA TTTTTCTTTTAAACCTATGGTGATCCATGTTAAATTAAAGCTAGTTCACTTAGAACCATATCTTACAACTAACATTCAAT ATATTTATTTATAATATGCACCTTAGGTGCAAAAACTAATTTACAGATTTGTTATTTTAACTAATGAACTATGTTTTTCT TGATTCACACAACAGATAAAATTGTATATTCATCACTTTTTTCTTCTCTTCATTTCTTAATTCTTACTCTAAATATCTAA GTACTCATTGGATGTGCACAACAATTTTCAACAAGAAGTATAGACAAATATTAGTTGCATAAATTAGAAATGAGAGAAAT GATTTACCGGGTCATCATGACGTACGGATCCATAAATTTTAGTCATGAGAGCAATATACACATGTAATCAAATTTGTAAT ATTAAAAACATAAGATATATCTATTAAAAATTTAAAAATATATCATAATTATTCTCAATGAGTTTTCTTACGTTAGAGAC TTTGCACAACCTTTTTTCTTTTCAAAGCTATGGAATATTTCTCTTTCGATACAAGTAATTAAGAAAATCAGTTAATCATT TATCTCTTATATAATTTTGCATGAATTCTTAATAATATTCATAGCGGAAAAATATTTTCAACCATTGTAGTCATTATTAT CCTATGAGTACACTTTCTTGATGAAGAAGAGATGAGTGAGGCTGAGATTAGGAGAACTCTCAGCTATGTGTAATCAGAGA AAAAGAAAAGAAAATGAAGAACTATACTATGAGACAGAGAAAAAGAAAAGAAAATGAAGAACTAAGCTATGAGACAGTTA GGTGAGAAAGATGAAATCAACTTTGAACAAAGAAAAGGTTGGATGGTCACGAGAATGTGGTTTTCATGTGCTAGTTTGAG AATAAATTACTACCGTTATTTGATCATGAAAGATCGAGCTTAAAACATAAAGTCATATGAAAAAAGTCTCATGTCATTTT TAAGTGGTTACGAGAATATCACATAACTATTAAATTATTTTAATCTTGATTATTCATAATCAATTCCAGCGGTCTCATAT CATTCTCATGTTCTCACCTAAAAATCTCATTTTTATAAGATACATTCCTTAATGATTATAAATTTATAATGTTAAAAACA TTTCACTCATCAGCCGTGATTTTAATATTTGTATTTATATATGTTATTTACAATATATATTTTTTTATACTAAAATCATT AATAAACTCGTTTTATCTTAGTTCGCGGTAGTCGGTAGACATAGTCATATATAACCAAAATGTTAAGATATATATCAATA AATTAGTATTCTGGCATTTGGTTAAATGATTTTCTTATAAAAATAATGGTTATATTTATAATAACATAAGAAAATATTTT TTAATGAATTAAAGGATTGTATATTGTTAGTATAAAATTTATTACATACACATGTAACTGTTCATTTTTTTTTACACTAA GGCAAAAGAATTGCAAGCAAACATCAACTTCTTGTAGTAGAACTTTTCTGTTTGAGTTTAATTAGAAAAGAATAATGAAA ATCATAAAAATAAAAATCTATTACTACTGTTTTCGTCATAGATTTGTAGTAATAGATTTTCGTCATAGCTTGCTTGTACA ATTCAAGTAAAACGGTTTTCCACCGTTCATATCGATTAAACTCTAACGTACATATGTTTAATACTACACCACATGGTCCA GCTTGGTAATTCGTGTAGCTAGCATGTGATGAATCAATTGATTCTGCCCAAAACTCATAAAAATGTTTTAATTTGATAGG CGGCATTTTTTTTATAGGCGGCATTTTTTTTTTTAATTTGGAGTGAGTAATGAGCCATCTCGATCATTAATTTGGTGCAG AGACTCTATTAATGAGTACTTATTGATTCAATGAATGAGTAAATAGTTAAATCATTTAGATGCCATTTGGTAAAAATCAC CCGTGTTTCTTATTACTGCGCTCTCTCTGTTTCATAAAGATTGTTATTTTAGACATTCTTTTGATATTTTAAAATGTTTG TTGTATTAAAAAGTAAACGCATTTTATGCTAATTTTTTCTACTTATAACTCATTTAATAAATTTTCTCTCACTTATCACT TCTCATATCAATCAACTATAACTTTTATTTATTAACTACATTCTTCTCTATCAAAGTATAATTTAATTGTTGCACATAAT ACTAGTAAAATTAATTAAGAGTAATATGTAACATTATACTATCAATAAATGTCATTTTAGTCTTTGTGCCACAACTTTAA CTACCATCATCTTCTTTTGTAAATTAAAATATTAATAATAGTCTTTGAAAATATTTTTACCAAAAAAAATTGTAAATATA TTAATATGATATTTTCTTTTGTAAAATTGTCACATATTTATGTTAATCTTTGCAAAACAATAAATTAAATGAACTCAATG GAATAATTTTTTTCATATATATGTAAATATTGGTTGTTGAGTAGTTTTTTATGCTTAATCAAATATTAAAAATGGCGGAA TTATATCTATAGTTAAATTTATGGTTATTGTTCAAATGAAATTGTTTTGTTCTGAACTTACTGTATACAGTACACAAAAC AATAATGTTCTATTCCATATTATTTCATTTGGTTCTTTCGTGTTGTTACCAAACTCTACCATAAACTACTTTTATATAGA TAAACCACTTTTATATAGAGAGAGTACATCAAGATGGACATAATTTTATTTTATTTTTGGTCAAAGATGGACATAATTTT AGAATATTGACAACAATAAATCAATATTTTTTAAATCCATAAACCCAATACACTTCACGGCCCAGCTTCATAAAACTACC ATGTGATACAGCTTAATCCAACCCCAAAAAAAACTCTTAAACTAAGTAAGCCCACCAGTTTCGAAAAAAAAAACTCTGCT TTCTTTGTCAGCTTGATTTTATGTAACGGTTGACAGGTCACTAACTAAGATGAATGAATCCTTTAATTGTGGCTCTCAGG ATGAGATGTTGGAGCCCTCAGTGAATGGAACCAGGAATGTGGTCATGGCAGCTGCAGAAGCAAAAGTGAGACGATTGGTG TTCACTTCATCAATTGGCACAGTTTATATGGACCCCTATAGGAGCAGGGATGTAGTGGTTGATGAATCATGCTGGAGTGA TCTGGAGTACTGCGAGAACACCAAGGTTTCCTTTATCTCTTAATTAGTGATCAATGCTCCTTAATTAATGTCAACAATTT GTATATTTAAATGATGGTTAATTTGCAGAATTGGTACTGCTATTGGAAAACCGTGGCTGAGCAAATAGCATGGGATGCAG CAAAAGTAAAAGGAGTAGACTTGGTTGTGGTGAACCCTGTAATGGTTATTGGGCCATTACTACAACCCACTCTCAATGCT AGTACAATTCACATCCTCAAGTACCTTACTGGCTCTGCTAAAACTTATGTGAATGCTACTCAGGCTTATGTGGATGTTAA GGATGTTGCATTAGCCCACGTTCTTGTGTATGAGACACCATCTGCTTCTGGCAGATATCTTTGTGCTGAAAGTTCACTGC ATCGTGGTGAACTCGTTGAATTTCTCGCCAAATATTTCCCTGCGTATCCAATTCCTACCAAGTAAGTGTTTGATCAACTG AGATTCAACTATTTCAGCTTTGATTCCTCCCTTAAAAAACTTAACAATTTGAATAATAACTGATATGGCAAGTCAAAAAA GTTGTTTGCCATCCATAGCATGCACCATAAGAAAAAAAAAAGAATCTGGGGGTGAGAATGACCTTTACTTTCAATATCTT GAATGAAACATATTATTGATCACATGTGCAGGTGTTCAGATAGAAAGAACCCGTGGGTCAAGCCCTACAAATTTTCAAAT CAGAAGCTAAAAGACTTAGGATTAGAATTCACACCAGTGAAGCAAGTTCTGTATGACACCATTAAAAATCTGCAGGAGAA AGGCTGCCTTCCTGTCCCCATAAAGCAAGACGACGCTTACATTGCAGCTAGGCTGTGAGTTCAAGTCAGAACAAAGTGGT AGCTTTTGTTGGAAATTTTGAAGCTATGTCTTAATTAATCAAATCCTGTTAGACACGAGATCATAGCATCTTCAGTAATT CCCACATATATAATTATATCATAATGTTGCTTGAGGGAGAGAGATTCATGCTTTTGAGCTCCTCACAGAATCTTAGTAAG TGATAGAGACTGCTATCTTCATCATAATCATGTAGAATGTGTTTTAAGTTCTGTAATGGAATAACAAGTCACAAATTCAT CAATTGGCTAAATA
CDS sequence (LotjaGi3g1v0350100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGATCCCTGTTGATACTTCATCAGTTTCCGGCCACACCGTGTGTGTCACCGGCGCTGGCGGGTTCATTGCCTCCTG GCTGGTCAAACTTCTCTTGGAGAAAGGCTACATCGTTAGGGGAACCGTGAGAAACCCAGATGATCCAAAGAATGGTCACC TGAAAGAGTTGGAAGGAGCCAGGGAGAGGCTAACTCTACATAAGGCTAATCTCCTTGATCTTGATTCTCTTAAACATGTC TTTCATGGTTGCGATGGTATCTTCCACACTGCCTCTCCTGTCACTGAAAACCCTGATGAGATGTTGGAGCCCTCAGTGAA TGGAACCAGGAATGTGGTCATGGCAGCTGCAGAAGCAAAAGTGAGACGATTGGTGTTCACTTCATCAATTGGCACAGTTT ATATGGACCCCTATAGGAGCAGGGATGTAGTGGTTGATGAATCATGCTGGAGTGATCTGGAGTACTGCGAGAACACCAAG AATTGGTACTGCTATTGGAAAACCGTGGCTGAGCAAATAGCATGGGATGCAGCAAAAGTAAAAGGAGTAGACTTGGTTGT GGTGAACCCTGTAATGGTTATTGGGCCATTACTACAACCCACTCTCAATGCTAGTACAATTCACATCCTCAAGTACCTTA CTGGCTCTGCTAAAACTTATGTGAATGCTACTCAGGCTTATGTGGATGTTAAGGATGTTGCATTAGCCCACGTTCTTGTG TATGAGACACCATCTGCTTCTGGCAGATATCTTTGTGCTGAAAGTTCACTGCATCGTGGTGAACTCGTTGAATTTCTCGC CAAATATTTCCCTGCGTATCCAATTCCTACCAAGTGTTCAGATAGAAAGAACCCGTGGGTCAAGCCCTACAAATTTTCAA ATCAGAAGCTAAAAGACTTAGGATTAGAATTCACACCAGTGAAGCAAGTTCTGTATGACACCATTAAAAATCTGCAGGAG AAAGGCTGCCTTCCTGTCCCCATAAAGCAAGACGACGCTTACATTGCAGCTAGGCTGTGA
Protein sequence (LotjaGi3g1v0350100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEIPVDTSSVSGHTVCVTGAGGFIASWLVKLLLEKGYIVRGTVRNPDDPKNGHLKELEGARERLTLHKANLLDLDSLKHV FHGCDGIFHTASPVTENPDEMLEPSVNGTRNVVMAAAEAKVRRLVFTSSIGTVYMDPYRSRDVVVDESCWSDLEYCENTK NWYCYWKTVAEQIAWDAAKVKGVDLVVVNPVMVIGPLLQPTLNASTIHILKYLTGSAKTYVNATQAYVDVKDVALAHVLV YETPSASGRYLCAESSLHRGELVEFLAKYFPAYPIPTKCSDRKNPWVKPYKFSNQKLKDLGLEFTPVKQVLYDTIKNLQE KGCLPVPIKQDDAYIAARL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 5 | 339 | 335 | 5.0E-140 | – | |
| SUPERFAMILY | 8 | 318 | 311 | 1.1E-69 | ||
| PANTHER | 10 | 328 | 319 | 4.8E-192 | – | |
| PANTHER | 10 | 328 | 319 | 4.8E-192 | – | |
| CDD | 15 | 302 | 288 | 1.00634E-160 | – | |
| Pfam | 15 | 246 | 232 | 9.0E-27 | ||
| Coils | 54 | 74 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Molecular function | Coenzyme binding | Interacting selectively and non-covalently with a coenzyme, any of various nonprotein organic cofactors that are required, in addition to an enzyme and a substrate, for an enzymatic reaction to proceed. |
Expression pattern of LotjaGi3g1v0350100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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