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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0352300 |
| Transcript ID | LotjaGi3g1v0352300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Cinnamoyl-CoA reductase; TAIR: AT2G33590.1 NAD(P)-binding Rossmann-fold superfamily protein; Swiss-Prot: sp|Q9SAH9|CCR2_ARATH Cinnamoyl-CoA reductase 2; TrEMBL-Plants: tr|I3T0N0|I3T0N0_MEDTR Uncharacterized protein; Found in the gene: LotjaGi3g1v0352300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:73191966..73195549) extracted from Lotus japonicus Gifu genome v1.2.
AAAACATGTAAACTCAAATAAGTTCTTCTGAATGGGGTTTAATTTTGTTTTCCATTCATCAAACATGACATTTTGTTTAA AAGAAACATGTATCAAGCAAATGTGTGACGTCTTTATTTTAAATGGACAATACAATACATGCCTTGAATTTTCTAGAATA TCAATTATCCATACTCTGACGCAGGACAAACAAATTCAGACAATTTTCTAGTACTTCTCTTCCTACTTTGTTCTGCTCTG TGAGGTGAAGAAACGGTGAAATGGCTTCGGTGGCTAAGAAGGTGTGCGTTACTGGTGCTGGAGGATTCGTAGCCTCTTGG CTCGTTAAGCTTCTCCTTTCCAAAGGATACACTGTTCATGGAACTGTCAGACAACCCGGTACTACTTTTTGATTTTCATT CCCTTTCACATCATCCATTTTTCTCAGTGACATTTTATCAAACAGTGTATCTGTGACCAGGAAGTCCCAAATATGAACAC TTGCTGAAACTGGAGAAAGCTTCTGAGAACCTCACTCTCTTCAAGGCAGATCTCTTGAATTATGAATCTGTTCACTCCGC AATTCTTGGATGCACTGCTGTTTTCCATGTTGCTAGCCCTGTACCCTCAACTACATCATCCAATCCTGAGGCAAGCAACA TGCAATTTTTTATTTTATTTCTTAAATTAACTTCTATTTTTTTAAAATAAATTATGGAATGTTTTCTTCTCTGAAAAATT AATTTCATAGATTTACTGAGATCTTGTAATTAAGGTGTGTAATTGGCCCCATTTAAAAGAATTTATTTGAGTTTAGTTTC ATAAGCGCTTATAGAAGTGTTGGTGAAGGTTTATACCCCGATTGGGAGAACTTATTTGAACTTATCTGATAGCATAAGCG CTTGTGCTAGTGTTTGAGAGAGCTTATGCAAACAACTTATAGTCTACCATAAGCTGTTTTGTGCTTATGTGGCTTTCAAT TTAGTTTAATAAATTTTTTAAAATAGCTTATGAATAAGCGCTTATGGCCTCTTATGACCATAAGCGCTTAATTAAGCTGT TTTCCCAAACGGGGTAACTATGAGTTGTTTTTAGCTTATTTTAGTACTTTAGACTAGCTTATGCAGGGCCAGTCCCGACA TTTTGGAGGCCTTGGACAAATAATAAAAATGGACCCCTAATAATTTTAACGTTCGAAATTTCATCAGAACCACTAGACCA GCTCAAGTCATTAATAACATCTTGAACATTAATTATTATAACTAAATTTTATTTTAGGAGAAAGTTTAATGGGAATATTT TTTTTTGGGCCCCTTCTTTTTTGAGGCCCTGGGCTGTGGGCCTGCTTGCAAAGGCCCAAGGTCGGCCCTGAGCTTATGAA AGCGCTAATTTCCATAAGCGCTTAATTAAACTGATTACCCAAACGCATCCTGAATATTAATAGACATTTGTTTATGCAGG TAGAAGTGATTGAGCCAGCAGTGAAGGGAACTGCTAATGTACTTGAAGCTTCTCTTCAAGCTAAAGTGGAACGAGTTGTC TTTGTATCATCTGAAGCTGCTGTCTGCATGAGCCCTAATTTACCCAAAGATAAAGTGATTGATGAGTCCTATTGGTCTGA TAAAGATTACTGCAAGAAAACTCAGGTGTGTGACATTTTGTTACATTAGTCGTGCTTATGTCAAGTCAAGTTTTTCTTCA ACCATGTTGTGTCATGTAACTAACTCACATTTCAATTTCACGTATGATCAGAACTGGTATTGTTATTCCAAGACAGAGGC AGAGGAGCAGGCCCTCGACTTTGCAAAAAGAACTGGGCTTAGTGTTGTAAGCATTTGTCCTACCGTAGTATTGGGGCCAA TTTTACAGTCCACTGTTAATGCAAGCACCTTGATTCTCCTCAAACTTTTAAAAGGTGCCCACTCATGCCCTATTGTCAAT TTCTAACCTTCATTGCACAAGTGGTGTTTGATTTTTGGTGTACAAGACAGATTCAAAAGTTGGAAATTTATTTGGTAATG GTATCCTGTCTACTCATCATGATTATGCCCTCCATGGGGATTTTGCTCTGCATCACTTGTTTCCCTGCTCCAAATACTTT TAAATGATGCCATATGTTTTGATTTATAGTCAAGTTTTAACATAGTTCTCAAACAAAAAAATGTTTTTCATGTTTTTGGG CTTGTCTTTCTTGATTGTTTGAAGCTGAAGGTTCTGACTCGATGGAGAACAGGCTCAGTTGGATAGTAGATGTTGGAGAT CTAGTTGATGCAGTACTTTTGGCTTATGAGAAGCTTGAGGCAGAAGGGAGATACATATGCACTTCACACCCTATCAAGAA ACGGGATTTGGTGGAGAAATTAAAGAGCATATATCCCTATTACAAGTACCCTACAAAGTAAGCTTCATTTCCCCATGATC TATAAAACTTTAAATTGAGGGAAAATTCTGAAGAAGTACTCATAAACCAAGCCCCAACCTAAATGTCTTGTTTGAGAGTT GCTTAAATGCTCCAACTTGTTGTATTTGGCCAAAGTTCTTTAAGAATATTGTTTGACAGTTACTTGTTTACTGGTAGATC CAATTCTTGTCACTAGTATCAATAAATGTATGAGATATGCAAAACATGTGAAAGATATAAGTGGTTTGTTTTTAATTGAA AATGAAAAAAGTCTCTAACTAATAAGGAGTGTATATAAAGAAGCTTACTTATTAAGCAAGTTCTTGAGAGATATAAATCC CAGTATTAGGAAATTGTTTGAGTGATGAAAAATGAGAGAGAGAAAACTGCAATCAATGTTGTGGAGTGTTTGCAACTTCA TTCATAATAGTTTCATTGACGAAGGGCTTATTAGTAGTGGGTGAGGGTTCGCAGCTTGACGATTGCTAATAGTGAAGATT CACTCATCTCTGTTTCAAACAAATAGATGTATTTATGATAAGATCTAATCAATGTGTGTGTATGTTTCATAGTTGCATTC TTATATTTATTTCATTGTTGGCAGGTTTACTGAAGTGGATAGTTACAGAAGGTTGACCTCAGAGAAACTGCAGAGGTTGG GTTGGAAGTCCAGGCCATTGGAGGAAACACTCATTGATTCGGTTGAGAGCTATAGAGAGGCTGGACTCCTGCAATCAGAA TAAATTTGGTTTGTTATATATCATTCTCCCTATTGGGAGGCTGTGCTCCTGGAATCAATAAATGTGACTTGTTGTTTAAG CATCTCCCTATTGTAAGGGATCCTTCAGTTGCTACATCTGCTTGTTCTGGATAATGAGTATGATTGTATTGTATGACCAC GAAGTGCTTTTAAATTTGGGAACTAAAAAGAGGGAAGGCAAGCATTCTTAACTATTAGCATACTTATTTATAATATTTAC TAGTGTTTTTTACTCGCGCGTTGCTCGGGAAATATGTCGTTGCTCGGGAAATATGTCTATTGTATTTGATACATTAATTA ATACTTTGATTATTAAAATATATTAAACAACGAATGAAATAGAAAAGTCAGAATTGATGAGTAAAGTGGAGATAAAGACT TCTCTTCTAAGCCCGATTGAGACCAAGAGGAACTTGTTTCACATTCTTTGTAAATATGAAGACG
CDS sequence (LotjaGi3g1v0352300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTTCGGTGGCTAAGAAGGTGTGCGTTACTGGTGCTGGAGGATTCGTAGCCTCTTGGCTCGTTAAGCTTCTCCTTTC CAAAGGATACACTGTTCATGGAACTGTCAGACAACCCGGAAGTCCCAAATATGAACACTTGCTGAAACTGGAGAAAGCTT CTGAGAACCTCACTCTCTTCAAGGCAGATCTCTTGAATTATGAATCTGTTCACTCCGCAATTCTTGGATGCACTGCTGTT TTCCATGTTGCTAGCCCTGTACCCTCAACTACATCATCCAATCCTGAGGTAGAAGTGATTGAGCCAGCAGTGAAGGGAAC TGCTAATGTACTTGAAGCTTCTCTTCAAGCTAAAGTGGAACGAGTTGTCTTTGTATCATCTGAAGCTGCTGTCTGCATGA GCCCTAATTTACCCAAAGATAAAGTGATTGATGAGTCCTATTGGTCTGATAAAGATTACTGCAAGAAAACTCAGAACTGG TATTGTTATTCCAAGACAGAGGCAGAGGAGCAGGCCCTCGACTTTGCAAAAAGAACTGGGCTTAGTGTTGTAAGCATTTG TCCTACCGTAGTATTGGGGCCAATTTTACAGTCCACTGTTAATGCAAGCACCTTGATTCTCCTCAAACTTTTAAAAGCTG AAGGTTCTGACTCGATGGAGAACAGGCTCAGTTGGATAGTAGATGTTGGAGATCTAGTTGATGCAGTACTTTTGGCTTAT GAGAAGCTTGAGGCAGAAGGGAGATACATATGCACTTCACACCCTATCAAGAAACGGGATTTGGTGGAGAAATTAAAGAG CATATATCCCTATTACAAGTACCCTACAAAGTTTACTGAAGTGGATAGTTACAGAAGGTTGACCTCAGAGAAACTGCAGA GGTTGGGTTGGAAGTCCAGGCCATTGGAGGAAACACTCATTGATTCGGTTGAGAGCTATAGAGAGGCTGGACTCCTGCAA TCAGAATAA
Protein sequence (LotjaGi3g1v0352300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASVAKKVCVTGAGGFVASWLVKLLLSKGYTVHGTVRQPGSPKYEHLLKLEKASENLTLFKADLLNYESVHSAILGCTAV FHVASPVPSTTSSNPEVEVIEPAVKGTANVLEASLQAKVERVVFVSSEAAVCMSPNLPKDKVIDESYWSDKDYCKKTQNW YCYSKTEAEEQALDFAKRTGLSVVSICPTVVLGPILQSTVNASTLILLKLLKAEGSDSMENRLSWIVDVGDLVDAVLLAY EKLEAEGRYICTSHPIKKRDLVEKLKSIYPYYKYPTKFTEVDSYRRLTSEKLQRLGWKSRPLEETLIDSVESYREAGLLQ SE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 2 | 322 | 321 | 2.9E-112 | – | |
| SUPERFAMILY | 6 | 318 | 313 | 5.29E-64 | ||
| PANTHER | 7 | 319 | 313 | 1.0E-142 | – | |
| PANTHER | 7 | 319 | 313 | 1.0E-142 | – | |
| CDD | 8 | 297 | 290 | 5.24645E-135 | – | |
| Pfam | 8 | 245 | 238 | 1.0E-28 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Molecular function | Coenzyme binding | Interacting selectively and non-covalently with a coenzyme, any of various nonprotein organic cofactors that are required, in addition to an enzyme and a substrate, for an enzymatic reaction to proceed. |
Expression pattern of LotjaGi3g1v0352300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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