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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0367600 |
| Transcript ID | LotjaGi3g1v0367600.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein NRT1/ PTR FAMILY 1.2; TAIR: AT1G52190.1 Major facilitator superfamily protein; Swiss-Prot: sp|Q9M817|PTR6_ARATH Protein NRT1/ PTR FAMILY 1.2; TrEMBL-Plants: tr|A0A1J7HW89|A0A1J7HW89_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0367600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:75373428..75377745) extracted from Lotus japonicus Gifu genome v1.2.
AAAAAATCTTGATTGGAAGATTGGGGACCCCTTGAATTCGGGTCCGTGCACTATAGTATTATGAAGAGTTGTACTAGTGT TCAAGAGTCCACTCTCTTCTCTTGAATTTTTCTTTTCTTGCCATCATGAAGAACTCATCAGCAATGGAGAAGGAAGTAGT GGAGATTTCTCAAAATGAAATGGAAATGGCTTCCCAAAACATTTCACAAAAACCACAAAGAAGCAAGGGTGGCCTTGTCA CCATGCCTTTCATCATAGGTAAAACAAAACTCACCCCACATCATCATCACAAAGAATTAACATGGATTATATTGTATGTG ATCATGTCATTTAGTTTGATGTTGTTGTTAATGTTGGTGTGAGTGCAGCAAATGAAGCACTTGCGAATGTGGCAACAATT GGTCTTCTTCCGAACATGATATTGTATTTGATGGGGAGTTACAACATTCATATGGCCAAAGCAACTCAGATCAACCTTTT GTCATCCGCAGCAACCAATGTCACGCCTGTGTTGTGTGCTTTCATTGCTGATTCTTATCTGGGTCGATTTCTCGTTGTCG GCTTAGGTTCCATAGTTACTCTCCTGGTATTTCTTTCTTCTCATCCTACTTTCTTGTTTTTCAGATTCCTTTGTGTGTTG AGTTTTGATAATTCTCGAGATCAATTTAGGCCCTTATCTTGTCACTTTTGCCTTTTCATATAATTATTCTCATACTTGTA CACCACGATAAAAAATGAAAAGGGATTGAAAGACCCGAATGGTGTGGACACGCAGAGTGAGATAAGAAGAGAAGAATAGA AGGGATAAATGTGATATGTTAGGCGATAGAGAAAAAATGAGGTTTATCATGTATGAAAAGTATCACTACTGACCCAAGGA GAAGTGTCAACACAAGTGGCCTCAACCCCTACAGGTGTTGGCTGCCCCAATGAACTTTCTTCAAGAAGCAAAGTGTTATG TAGGTCAAGTTTGGATGTAGAAAACCATTGTTTCTAAGACCCTTAGATCGCCCCGTAATGAAAACTGTCCGTACTGCAAT AGAATAGAAGCAGACACTTCTTGGCCAGGTTGCCCCTAGGGGACATGGCCACATTGGGTCACCCTTATGGCTTCACCACT TTTCTTACTAACACTCTATTTTATTAGTTGAAATTCATGTGATGAGACTTATGTGAAAAAGAGTGTGAAAGTGAGTTCCG CTAACATTTTCGAAACAAATATGCAACCCAATCAATTGGATAAAGAAAACTCATGTTTCTGTTCATGCCTATTGGAAGTA GGAAGTACCATATGATACTTATGAACATGAAAGAATGACTCAAGGCTAAAGAACCCTCTAGCTTGGGCTTTCGCCCCTCA CATTATCAAAAAAAAAAAAAAACCCCTCTAGCCCTCTAGATAGATTAGAAGATAATACTTTTTAAAGAAAGGATTAAAGA ATAGTAATGTGCTAGTTTTAGTTCTATTGCTCATCAGTAATAAATTAACCGCATGTCATATGCTAGTTCTGAAAACTCAT TAGTACTAGTTTAGCAATTGGAATGATCAGTAAAATAGTCAATTGCATTTAGGCTTTGAGTGGTGGCCGGTGGGCTGTCT AGTCTATGGCAAATGATCCGAATTTCGCTCGAATTTATATCAATGAAACAAAAATGGATGATTCAGCTTGTCAGAATTCA GGCACTTGAGATTTTTTTTTAATCCATCGGAAAACTAGACAAAACAAACACAAAACACTAAATAATAGAAAAAGAATCCC TCGTCAGAAGCACTTCCAGTTCTGCATGTGGACTCTCTAGAATAAATTAATTTTGAGATAAAAAAATAATACTACATTAA GGGCTTTTATTAAATTATTTATTCTAAGTAACTTTTGTGGTGTACTCTATGTGATTGTTAATATACTTTTTCGATGAATT ACGAGGGGATTGTTAACACTTAATATACTTAAAAATAAGAGTTGAAAACCTTTTTATAGATCATAAGTGTATTGTCTCCT TTATCTATGTTATTATATTACAAATTGTTTTACAGAGCTAGCTTTTTTAGTTTTAGTTATAAGTTTAAGTATACTAAAAA TATTTAATAATTTTACTATGAATTTTATAATTGAAAAGTATTAAATATAATTATATAATAGAATAAATACAGAGCTTACA AATAAATATTTTATTTAACTTATTACTTAATAAAAGAAGTTTTGCTAATTTAATCTCAATTAAGAATTTAGTATCATTGA ATTTAAAAAAATAATTTAGTATTATTGATTTTATCATAACATATGACACAAGTCTCTAATATCTAACAATCATTTTCGTT TCTCGAAACAATTCTATCAAGAGAAGTCACAACTTTTTTCCTTTGTCACAGGGAATGGCGCTCTTGTGGCTAACAGCCAT GATACCACAGGCACGCCCTTCTCCTTGCAACTCAGCAACAAAAACATGTAAACCAGCAACAACTAAGCAAATGACAATGT TAATCTCTTCCCTTGCTCTCATGTCAATTGGAAAAGGTGGCCTTTCATGCTCTCTGGCATTTGGCGCAGACCAGGTCAAC AGAAAAGACAACAACTCCAATAAACAGAGAGCCTTGGAAATATACTTTAGTTGGTATTATGCTTTTGTAGCTATTTCTGT CATAATTGCTCTCACAGGAATAGTTTATATCCAAGATCATCTTGGATGGAAATTGGGTTTTGGAGTTCCTACAGCACTAA TGCTCTTGTCAACTATCTTTTTCTTCCTTGCTTCTCCACTTTATGTGAAGAATCAAATACAAGATAGCTTGATCACTGGC TTTGCACGCGTAATCGTCGTGGCCTATAAGAACAGGAAACTTCCATTACCAGCAGGGAACTCAGCTGGAATACTGTATCA TCGTAAGAAGGACACGAATCTTGTTGTTCCAACTGATAAATTGAGGTTAGATTGAATCACATTTCTGTAGTCATTGTTTT TCTTTTGCGCATGTTTGGAAACTCATTCAAAAACCACGGTGAAGCCCAAATCATGGTTCTACCCACCATCATTTTGGGTT TTCAAACGAGTTTCCAAACATGCACGTACTCTCCAGATGAAATTAATGACATTGAACTTTTAGAGATGCTTAATTTCTTT TGTAGGTTTCTGAATAAAGCTTGCCTCATTAAAGACCATGAAAAAGATATAGCCTCTGATGGGTCACCCTCTAATCCATG GAGTCTATGCACAATAGATCAAGTAGAAGAACTAAAAGCCATTATCAAAGTTATTCCACTGTGGTCTACGGGTATCATGA TGGTCCTTAACATTGGAGGTTCATTTGGAGTGTTGCAAGCTAAATCCATGAACAGACACATCACTCCAAATTTTGAAGTT CCACCAGGTTCTTTTGGTGTGATCATGGTGATTACAATATTTCTATGGGTGACTCTTTATGATCGTGTCATCATTCCTAT AGCATCAAAGCTCAGAGGCAAACCAGTTAGGATCAGTGCCAAGACAAAAATGGGAATTGGGTTGTTTTTCTCTTTTCTTC ACCTTGTAACCGCAGCTATTGTCGAGACTATGAGGCGAAAAAGAGCAAGCACTGAGGGATATATCAATGATACTCATGCT GTGTTAAATATGTCTGCAATGTGGCTTGTTCCTCAACTTTTCTTGGGTGGCTTGGCAGAGGCATTCAATGCAATAGGCCA AAATGAGTTCTACTACACAGAGTTTCCCAAAACCATGTCAAGTGTTGCATCATCTCTTCTGGGATTGGGAATGGGGGCAG GAAATGTGATGTCTAGTTTGGTATTCAGTATTGTGCAAAATGTTACTAAAAGAGGGGGAAAGGAGGGATGGGCTGCAGAT AATATTAACAAGGGTCACTATGACTGGTACTACTGGGTGCTTGCTGCATTGAGTGTTGTAAATATATTTTATTATCTAAT TTGTAGCAAGGCTTATGGACCTACTGTTGATCAAATATCCAAGGTGACAGATGAAAATGGTTCAAATGAAGACAATGGCT TGAAGGAGAAAGAGTCAGGATGAAAAGGAAAAGGAAGACAAGTTGAAGTTTATTTTAATATTTTGATCAGCGGCAGCTGC ATATATCTATGACTAGGCTATTAATGAACTGAACTTACATATAAACTATGCCAGAATGTAATAAGGTATATTTGCTCTAT AGTGAATTGTTATATTCTAAAATCAGGTCTTTCAAAGTCTAACCTAACCTAACTCAACTTATTTTGTATGACCCCTAGTT GCAAGGTTGCATGGAGAATGTCATGTTTATGGTATTATGGTTGTTCACCACAAGAGTGGCATTCCCTGTAAAAGAAGC
CDS sequence (LotjaGi3g1v0367600.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGAACTCATCAGCAATGGAGAAGGAAGTAGTGGAGATTTCTCAAAATGAAATGGAAATGGCTTCCCAAAACATTTC ACAAAAACCACAAAGAAGCAAGGGTGGCCTTGTCACCATGCCTTTCATCATAGCAAATGAAGCACTTGCGAATGTGGCAA CAATTGGTCTTCTTCCGAACATGATATTGTATTTGATGGGGAGTTACAACATTCATATGGCCAAAGCAACTCAGATCAAC CTTTTGTCATCCGCAGCAACCAATGTCACGCCTGTGTTGTGTGCTTTCATTGCTGATTCTTATCTGGGTCGATTTCTCGT TGTCGGCTTAGGTTCCATAGTTACTCTCCTGGGAATGGCGCTCTTGTGGCTAACAGCCATGATACCACAGGCACGCCCTT CTCCTTGCAACTCAGCAACAAAAACATGTAAACCAGCAACAACTAAGCAAATGACAATGTTAATCTCTTCCCTTGCTCTC ATGTCAATTGGAAAAGGTGGCCTTTCATGCTCTCTGGCATTTGGCGCAGACCAGGTCAACAGAAAAGACAACAACTCCAA TAAACAGAGAGCCTTGGAAATATACTTTAGTTGGTATTATGCTTTTGTAGCTATTTCTGTCATAATTGCTCTCACAGGAA TAGTTTATATCCAAGATCATCTTGGATGGAAATTGGGTTTTGGAGTTCCTACAGCACTAATGCTCTTGTCAACTATCTTT TTCTTCCTTGCTTCTCCACTTTATGTGAAGAATCAAATACAAGATAGCTTGATCACTGGCTTTGCACGCGTAATCGTCGT GGCCTATAAGAACAGGAAACTTCCATTACCAGCAGGGAACTCAGCTGGAATACTGTATCATCGTAAGAAGGACACGAATC TTGTTGTTCCAACTGATAAATTGAGGTTTCTGAATAAAGCTTGCCTCATTAAAGACCATGAAAAAGATATAGCCTCTGAT GGGTCACCCTCTAATCCATGGAGTCTATGCACAATAGATCAAGTAGAAGAACTAAAAGCCATTATCAAAGTTATTCCACT GTGGTCTACGGGTATCATGATGGTCCTTAACATTGGAGGTTCATTTGGAGTGTTGCAAGCTAAATCCATGAACAGACACA TCACTCCAAATTTTGAAGTTCCACCAGGTTCTTTTGGTGTGATCATGGTGATTACAATATTTCTATGGGTGACTCTTTAT GATCGTGTCATCATTCCTATAGCATCAAAGCTCAGAGGCAAACCAGTTAGGATCAGTGCCAAGACAAAAATGGGAATTGG GTTGTTTTTCTCTTTTCTTCACCTTGTAACCGCAGCTATTGTCGAGACTATGAGGCGAAAAAGAGCAAGCACTGAGGGAT ATATCAATGATACTCATGCTGTGTTAAATATGTCTGCAATGTGGCTTGTTCCTCAACTTTTCTTGGGTGGCTTGGCAGAG GCATTCAATGCAATAGGCCAAAATGAGTTCTACTACACAGAGTTTCCCAAAACCATGTCAAGTGTTGCATCATCTCTTCT GGGATTGGGAATGGGGGCAGGAAATGTGATGTCTAGTTTGGTATTCAGTATTGTGCAAAATGTTACTAAAAGAGGGGGAA AGGAGGGATGGGCTGCAGATAATATTAACAAGGGTCACTATGACTGGTACTACTGGGTGCTTGCTGCATTGAGTGTTGTA AATATATTTTATTATCTAATTTGTAGCAAGGCTTATGGACCTACTGTTGATCAAATATCCAAGGTGACAGATGAAAATGG TTCAAATGAAGACAATGGCTTGAAGGAGAAAGAGTCAGGATGA
Protein sequence (LotjaGi3g1v0367600.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKNSSAMEKEVVEISQNEMEMASQNISQKPQRSKGGLVTMPFIIANEALANVATIGLLPNMILYLMGSYNIHMAKATQIN LLSSAATNVTPVLCAFIADSYLGRFLVVGLGSIVTLLGMALLWLTAMIPQARPSPCNSATKTCKPATTKQMTMLISSLAL MSIGKGGLSCSLAFGADQVNRKDNNSNKQRALEIYFSWYYAFVAISVIIALTGIVYIQDHLGWKLGFGVPTALMLLSTIF FFLASPLYVKNQIQDSLITGFARVIVVAYKNRKLPLPAGNSAGILYHRKKDTNLVVPTDKLRFLNKACLIKDHEKDIASD GSPSNPWSLCTIDQVEELKAIIKVIPLWSTGIMMVLNIGGSFGVLQAKSMNRHITPNFEVPPGSFGVIMVITIFLWVTLY DRVIIPIASKLRGKPVRISAKTKMGIGLFFSFLHLVTAAIVETMRRKRASTEGYINDTHAVLNMSAMWLVPQLFLGGLAE AFNAIGQNEFYYTEFPKTMSSVASSLLGLGMGAGNVMSSLVFSIVQNVTKRGGKEGWAADNINKGHYDWYYWVLAALSVV NIFYYLICSKAYGPTVDQISKVTDENGSNEDNGLKEKESG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 47 | 47 | - | – | |
| PANTHER | 11 | 591 | 581 | 0.0 | ||
| PANTHER | 11 | 591 | 581 | 0.0 | – | |
| SUPERFAMILY | 38 | 569 | 532 | 3.79E-18 | ||
| CDD | 40 | 572 | 533 | 0.0 | – | |
| TMHMM | 42 | 64 | 23 | - | – | |
| Phobius | 48 | 67 | 20 | - | – | |
| Phobius | 68 | 78 | 11 | - | – | |
| Phobius | 79 | 98 | 20 | - | – | |
| TMHMM | 79 | 98 | 20 | - | – | |
| Phobius | 99 | 103 | 5 | - | – | |
| Phobius | 104 | 124 | 21 | - | – | |
| TMHMM | 105 | 127 | 23 | - | – | |
| Pfam | 107 | 537 | 431 | 1.4E-73 | ||
| Phobius | 125 | 197 | 73 | - | – | |
| TMHMM | 153 | 175 | 23 | - | – | |
| TMHMM | 195 | 217 | 23 | - | – | |
| Phobius | 198 | 217 | 20 | - | – | |
| Phobius | 218 | 228 | 11 | - | – | |
| TMHMM | 227 | 249 | 23 | - | – | |
| Phobius | 229 | 249 | 21 | - | – | |
| Phobius | 250 | 343 | 94 | - | – | |
| Phobius | 344 | 365 | 22 | - | – | |
| TMHMM | 345 | 367 | 23 | - | – | |
| Phobius | 366 | 384 | 19 | - | – | |
| TMHMM | 382 | 404 | 23 | - | – | |
| Phobius | 385 | 405 | 21 | - | – | |
| Phobius | 406 | 425 | 20 | - | – | |
| TMHMM | 425 | 444 | 20 | - | – | |
| Phobius | 426 | 445 | 20 | - | – | |
| Phobius | 446 | 464 | 19 | - | – | |
| TMHMM | 464 | 486 | 23 | - | – | |
| Phobius | 465 | 485 | 21 | - | – | |
| Phobius | 486 | 505 | 20 | - | – | |
| Phobius | 506 | 529 | 24 | - | – | |
| TMHMM | 507 | 529 | 23 | - | – | |
| Phobius | 530 | 548 | 19 | - | – | |
| Phobius | 549 | 567 | 19 | - | – | |
| TMHMM | 549 | 568 | 20 | - | – | |
| Phobius | 568 | 600 | 33 | - | – | |
| MobiDBLite | 581 | 600 | 20 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi3g1v0367600.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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