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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0368000 |
| Transcript ID | LotjaGi3g1v0368000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | basic helix-loop-helix (bHLH) DNA-binding superfamily protein; TAIR: AT4G29100.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein; Swiss-Prot: sp|Q8S3D1|BH068_ARATH Transcription factor bHLH68; TrEMBL-Plants: tr|I1KGL9|I1KGL9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0368000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:75436057..75440305) extracted from Lotus japonicus Gifu genome v1.2.
TGGCCACACCAGCTTTTGCGTTCCACTTTATATAATAAAAAGGAATACTGAATAAATGAAACTCATAAAAGATAAAGGAA AGAAAAAAGCAACTTACATATGCAAAGTTTTCTCATCCCCTACTCTATAAAATACTGAGACCCCAAAACTTTAAGTTTCT TCAACAGCTAGTAAGAAAGCAACACAAAACACTCAAAGCTTTAGCCAAAGGCTTGTTTGGGTGCACAGAGAAGGAAATAT CACAAAGGTGAAAGAGGAAAAAAGCATAGAGGAAAAGGAGATTATTAAAGGTTTCATTTATATGTTCATTTGAAGGGAGA GGGAGGAAATTGAGTATTAATTCCACAGGAGGTTATTCTTCTAGTTTCAGCTAGCTTGCAAATGATGGCTGGGAACCCTA ACTGGTGGAGTGTGAATCCACCATCTTTGATCCCTTCTTCTCAGTATGCAATTGGATCTTCTTCAAATCCTTTTAGTTCT TTGAATGAAAACCTGGAGCCCCATCAGTCATTGAGTCAACTTCTTTTGTAAGCACTCTTCTCTCTTCTTTATGCATGTGT GTGGCTTCTAGGAACCAGTTTGGATACAAGTTTATTGTAGCTTATCAACTAGAAAAATCACTCTATAAGCTTCGATGAGT GTTCTTTGGTTTGCATCCAAATGAGTTCTAGATCAATCTTTTCTAGAGTTGGAATTATATATTCATGCATGTTTCACTCT ACAGTTTGTTGGTGTGAAAACTTGTGGGTTGTGGATGTTTTGCAGTACTGGATTACCAGGAGAAGAAGAGAGAGTTGCAT TTAGTCATTTTCAGCCAAAAAAGATGGAAAACTGGGATGAACATATTATTAACACATCCTCCATGGTTCCTCTTGTTGAT GTAATAAAGCATGAAGTTTCTCGAAGTGGCAACAACTTATATCACCCTGGGCATGGGGAATTTCAGGTTCCTGGAGCAAC TTGGTCAAATATGGTGACAGTTTCTTCACCTAGGTCAAGTTCTGTTACTAGCTTGAGTAGTAATAATTTATTGGATTTCA CTTATAATAACAAGGTCGATCATAGGAAGATTAACCAACTCCCAGATCACACATCTGAGGTAATAATCTCATGAGAGGTT CTTGTTGTTCTTTTCTCTTCTCCTCTCTCATCTGAAAATTTTCACCTTTAGACACTAATTGAAGCATGCAGAGATGATCT CTTTTATATACTCTAAATTCAAGTTGTTTTTTATGTGTGATCTCTTCTGCTCTAGTGTAATAGCAAAGCCACTGGTGGAG TTTGTAAGAAGACAAGGGGTCAGCCATCTTCAAGCCAACCACCTCTGAAGGTAACCCAAAGACTCTCCCTTCTATTCTCA TGCTCTTGACACAGTCTCTCTCAGGCGCACACACATCCTCACATTTTTTAAAACTCTTCTATAATTAAATTTGGAATCAG AATCAATTCTGAAGAGAAGTTCAGTGAGTAGTTTCTGAGATCCAGAGTTGACTACAATGAAAGAAAAAAATTGACTCAAA CATGGTATTAGTGTTTTGTTGTGTGTTGTCTTTCTTGATTGTCTGTATTGGTAAGATTCTTTCTGCCGGTAAAGAAACAT GTATGATAGATGAAAGACGTACATCAGAAAAGCACATGAAATTCATGTACTGACTTTCACAAAATGAAATCTGAATCAGG TGAGAAAGGAGAAGCTAGGTGATAGAATAACATCCCTTCACCAGCTGGTTTCCCCGTTTGGAAAGGTAATAAACAAATAA CCATTTCATCTTACTACAAACACAATACACACACAAAAATACAGTTATACAAAACTATCAACCATTTCAGCCTCCTTTTG TACTTAAATACATGTTTGGAAATCTTTTTACGGTTGATTTTGATACTAAAATCAATTTTGACGGTAAGTAAATTCTGGAT CGGATGTCAGGATTAATTCTAACTAAAAAGAAGCTGATTTGTTTGAGAATTTATAGGACCCTTGAATAGTTCTTTTCCAT ACTTTTTGTGATCCAAGTCTTCTAACTTTTACCTCTTCTCTTTAATCGAGTTTCATTTTGATCTTACAAATAAAGAAAAA GAGAGACAAATGACCGGGTGTTGTGCTTGTGGTATCTATGTTTTTACTTTTGCAGACTGACACAGCTTCTGTCTTGTTAG AAGCAATTGGATATATCAGATTCCTGCAAGGTCAAATTGAGGTGATGGTTCTCCCACATTTAATTAATAGAGAGCATGCA ACTTAAGTGCTACCAATTATGTTTCTTGACTGTAATAATATTTAGACACTCATAATAGTATAGACAACTCACAAACACTC TATTTTTCTCTTTTTTACTATATTCATTATTTCTCCATCTTCTCTTTCTTTCTCTCTCACTTTGGATATCTATACTTGTG AATGTCTATGAATCCTTTTAGTTCTCCAAAACATCCTCTAATTTTGTTATTCTTTTCTCCATCTTGGTGCAGGCACTCAG TTCTCCTTACTTGGGTAATGGATCAAAAAACATGAGGAATCAACAATATGTAAGTACTGATCATTTCCCTTTTCCAAAGT CTCTCTCACACACATCCATAACACACACCTAGATGTTGAAGAACAAAAATACCTATATTGTATGCACTAAAACATATAAT TGAGGGCTAAGTTTCCTCTTTTTTATCTTTTCTTTTCAAACAACAGGTACATGGAGAAAGAAATGCTGTATTTCCTGAGG ACCCCGGTCAGGTATACTTTATTGGATCCATCAATTCATTACAATCAAATTAGGAGGCTCTTTACAGTTATTGCAATATT TAATTCAGAGAAAAAGCCATTGAAAATAACAAGGCTTCTCAGCTTTTTTATAACATCTTTTATATTGCTCATTCATTTGA ATTTTGAAGTCAAAAAGGGTGGAGAGAGAAGTGAAATATAATTACTAATTAATACTTTTTTCTTCTCTTTTTATTTCCAT CTAGCTGTTAAATGATTCTGGCCTGAAAAGAAAGGGAGCTCCAAACCAGGTATTCTTTCTTTTTATGCAAAGGTGTATAC TGTGATGAGTTTAGTATATTCTCCTTCATTTTTGGATACTTGATAAGTATCCATCCTAATCATTATTATCATTCTCACCA CTAGTTGCATTGCTACAGTGCATGCATATATAGCTAGAACCATGAATTTTGCCATTCAAATGATTAGTGGAGAAGATAAT CGTCACGTCCATTAAAAAATATAATTATTGTAATTGTTAATTAAATTTGTCATCAATTTACAGTAGTAAAAAAGATTGAG GGACCAATTAATGTAATACATTTAAAAGTAGTATTGAATGATTAAATCTCTACCAAAAAAAAAGAATGATTAAATCAAAG TATTTTTGTCAAAATAATAATTTATTCAACATAAAATTCAAGCATTTATACTTAAAAAAGGTCAAGCTATACCTCTAATT TTAGGCTTTGTCTATAATTGATATAAAAATCTTGTTTACAAGTTAAAAATGACTTTTTATAAATTAAATTTTGGTACATA AGAATTGCAAACAACATATACTGGAGTAAATGTTACTAGTAAAAATATGATTCATGATTGGATACATGGCCATGGTAGAA TTACCCCAACTTTGTTCTTATAATAAGGATTAGTAGTAATTTTTTAAAAAAACAACAAGGATTCGAAGTAGTATATTGGT GTCATTTCTTTTTAAAAAAATAATTGAGTAGAAAAATGATTAAAATCTTATCATTTTATTTTAACAATAATCAGGATGGA GATAGGCCAAAAGACTTGAGGAGTAGAGGGTTGTGCTTGGTTCCAGTCTCTTGTACCCAACATGTTGGAAATGAAAATGG AGCTGATTACTGGGCACCTGGATATGGCGTCGGTGGATTTTAACATTCCTTTTTAGAATAAAGAAGGAAGAAATATTAAG ATGATATAACATCGTGAGCAGTCACTCTAAAGTAATGAAAAGGCTGATTGCTCACGATGCTATATATGCATCATGTATTG TCCCTAATCTAATTAGGTTGACTTAAATAAGTTGTGAAAACATTAATTAATTTGTAATTTTAATTAGTTTCTAAGTATGC ATTTAATGAGGTGGTGCAATTATTCCTCCTTTGGTTCAGAAGGATGATTATTACTGGTAATTAATGTTCTGTTTAAGATC ATACTATATCAACTTTAACTGTTCCCTCCCCCTCTACTTATTTATTGCATTCCTTTTTACATTTTCTTGCTTGAAAGATT ATATAGTAG
CDS sequence (LotjaGi3g1v0368000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATGGCTGGGAACCCTAACTGGTGGAGTGTGAATCCACCATCTTTGATCCCTTCTTCTCAGTATGCAATTGGATCTTC TTCAAATCCTTTTAGTTCTTTGAATGAAAACCTGGAGCCCCATCAGTCATTGAGTCAACTTCTTTTTACTGGATTACCAG GAGAAGAAGAGAGAGTTGCATTTAGTCATTTTCAGCCAAAAAAGATGGAAAACTGGGATGAACATATTATTAACACATCC TCCATGGTTCCTCTTGTTGATGTAATAAAGCATGAAGTTTCTCGAAGTGGCAACAACTTATATCACCCTGGGCATGGGGA ATTTCAGGTTCCTGGAGCAACTTGGTCAAATATGGTGACAGTTTCTTCACCTAGGTCAAGTTCTGTTACTAGCTTGAGTA GTAATAATTTATTGGATTTCACTTATAATAACAAGGTCGATCATAGGAAGATTAACCAACTCCCAGATCACACATCTGAG TGTAATAGCAAAGCCACTGGTGGAGTTTGTAAGAAGACAAGGGGTCAGCCATCTTCAAGCCAACCACCTCTGAAGGTGAG AAAGGAGAAGCTAGGTGATAGAATAACATCCCTTCACCAGCTGGTTTCCCCGTTTGGAAAGACTGACACAGCTTCTGTCT TGTTAGAAGCAATTGGATATATCAGATTCCTGCAAGGTCAAATTGAGGCACTCAGTTCTCCTTACTTGGGTAATGGATCA AAAAACATGAGGAATCAACAATATGTACATGGAGAAAGAAATGCTGTATTTCCTGAGGACCCCGGTCAGCTGTTAAATGA TTCTGGCCTGAAAAGAAAGGGAGCTCCAAACCAGGATGGAGATAGGCCAAAAGACTTGAGGAGTAGAGGGTTGTGCTTGG TTCCAGTCTCTTGTACCCAACATGTTGGAAATGAAAATGGAGCTGATTACTGGGCACCTGGATATGGCGTCGGTGGATTT TAA
Protein sequence (LotjaGi3g1v0368000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MMAGNPNWWSVNPPSLIPSSQYAIGSSSNPFSSLNENLEPHQSLSQLLFTGLPGEEERVAFSHFQPKKMENWDEHIINTS SMVPLVDVIKHEVSRSGNNLYHPGHGEFQVPGATWSNMVTVSSPRSSSVTSLSSNNLLDFTYNNKVDHRKINQLPDHTSE CNSKATGGVCKKTRGQPSSSQPPLKVRKEKLGDRITSLHQLVSPFGKTDTASVLLEAIGYIRFLQGQIEALSSPYLGNGS KNMRNQQYVHGERNAVFPEDPGQLLNDSGLKRKGAPNQDGDRPKDLRSRGLCLVPVSCTQHVGNENGADYWAPGYGVGGF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 13 | 316 | 304 | 1.8E-108 | – | |
| PANTHER | 13 | 316 | 304 | 1.8E-108 | – | |
| MobiDBLite | 155 | 185 | 31 | - | – | |
| ProSiteProfiles | 175 | 224 | 50 | 11.255 | ||
| CDD | 185 | 229 | 45 | 1.63524E-5 | ||
| SUPERFAMILY | 185 | 236 | 52 | 6.67E-10 | ||
| Gene3D | 185 | 236 | 52 | 2.6E-5 | ||
| MobiDBLite | 256 | 286 | 31 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein dimerization activity | The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits. |
Expression pattern of LotjaGi3g1v0368000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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