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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0369800 |
| Transcript ID | LotjaGi3g1v0369800.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Mitotic spindle assembly checkpoint protein MAD2B; TAIR: AT1G16590.1 DNA-binding HORMA family protein; Swiss-Prot: sp|Q94FL5|REV7_ARATH DNA polymerase zeta processivity subunit; TrEMBL-Plants: tr|A0A151S2V7|A0A151S2V7_CAJCA Mitotic spindle assembly checkpoint protein MAD2B; Found in the gene: LotjaGi3g1v0369800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:75643267..75652808) extracted from Lotus japonicus Gifu genome v1.2.
CCATGAAATGCTGGATAATAGAATCTAACTCCAATGATTTATTATAAACAATTTGGAGCAGTGAATATACCTCCATAAGC AACAATGTCTACCTCCAAAGAAGCCTGCAATGCCACATAGAAAAGCCAGTAGGTCGATCAAAAGTACAAATAAAAATATC TCAAAGAACACATAAATTAGGATTAGATACTGTAAAAATACATAATGCTCATCCGGTCATCCCTACAGTTGAAAGAATGG ACATTTAGGTTGGAGAATCAATTAAGAATTGGGATAACAAGAAGTCAATATCATCAAAGTAGAGGAGATACAGCACATAG GAATTCAAAATGAAATGACTGAAGTAAAGTGGTGTAGCAGTTCAAACAAAAGCTATACCCAGTTGAGGAAATTCCAAACA AAATTACTAAGAAGCACGGACACTCGGACACGACAAGACACCGGTACCACGACACGGCTAAAGTCCAAAAAGCAAGACAC GGGGACACCGCATATATTTATATATATATCCCTTAGTATTTTTTTTATGAAACTCTTGTCATAAAGCTTAGGAAATGTTT TGATGTTTTCTTTGTAAAAAGGCAAATTGTATGCAAAAAGAACTAATCTATCTACTGGTTTTCACTCTTTTATTGGTCAT CATCATTGAAAATGCCTTTGACTTTGGTTCTTCAAGTGATAAATTAGCAATTTCTTTCATGGTTCACTCTTAAAAATTAT ATATTTTTTAAAAAAACAAGTGTCCTAGAGGTGTCCAGCCAAAAAGAGGTGTCGGCTCAGGTGTCCGAGCCGTAAAAAAA TACTCTTTTAATTAGACACGGCGAGGAAGTGTCTGACATGTGTCGCATAAGTGTCGTACATGTGTCGGTGTCCGACACCG GGACAAGGCATATGTAAGAGGTGTCCGTGCTTCATAACAAAATTATATGTTAATTAATTGAGCCCACATCATTAGCTCAT GGCTATACTGACTAGGTTTCTAAAACCAATAGCAACTACTGTTAAATGAATCCTCAAGATCACCGAAACAGCACTATGGG TTTCCCAAAAAAAAAAAGTTCTGGGCATCAACTGGGTCTCAGAAACTTCTAACAGCAAAGGCTAGTAGGCTACCAGGTTT GGATATATCAGTTGAATATGCATACAAACTTGGAACATGTAACTTAAGCAACTAAGCAAGTCTGGATTAAATTTTAGAAT CATGATCATAAAAGGAGAAACATCTAATAAGAAGAAGCATTCAGATTAAAGATGAACTTTGTCATGATCTTACTCCAAAA CATGAAAATTAACAGCATGATTGATTCTCAGTCAAGTCTACAACTTTATCTTAAATTAAAACATGGAACAGAAGATTTAT TATTCAAAAGCAGTACTTTTACTATGATCCTAGTCCTGGAAAAATAACAAATGTCAGGTCACACTAACTCTGGAATTAAA CAGAAAATCAAATCAAATTATTACATGAAATTCTAAATGAAAAAAAATGAACAAAAAATCAAAACCTGATTGGCAAGTGA AAGAGCATGGTACTGCATTCGAGGGCTGCGTCCAATGTCACCTAAAACCACCACGCACGCCCTCCCTCTTCTTCCTCCTT TCATCTCTTTGCTTTTTCCTTCCATTTCAGTTAAATTCAAAACTCAACAAAGCCATTCAGAAAAATTAAAAATCCAATCT TTTCGAATAAATCATCGGAAAAATCGAAAAGGGAAGAAAATCTCACCTGCCATTTTCACATATTGCTGGAAAATCAATTT TTTTTAGGTGGGCTGTGACAGAGAAGAGTGAAGTTGAAAAAACATCCGGGTCCAGTTCTGACCCAGTTCATATCCGGGTC GGGTTGGTGGCAAGTTTGTAATTCCAAGTTAAATTCATGGCCTTTTTTGTCAAAGGTTCTTCCTTTAAGTGAAGAGTGTT TTCAGAGAATTCAATTGATTATGGAGCGCGGAGAGAATCAAACTCCGCAAGGTTTGTACTTTGAATTCATCAACCAATAA AGTTTGGATTTTTAATCATTTTGTATTCACATTGTTTGTGATCACTAGTTTCTGTGTGAAAATTTTGCAGGCCAAACAGC TCAAGTTTTGGTTGAATTTTTGGAGGTGGCTATCACTGCTGTTGTTTTTCTCAAAGGGGTTTATCCTTCTGGTTTGATAC TTGCATACCCATTTTGAAGTTTTGTCCTTCCTATAAGTTTTGGTGTTTGTTTGTTGGCAAGATAATCAATGATTTTGCTT TGATTTTGTTGCCCTTGGCAATCAAATAGTATAATTGGATGGAATTGAATTTTGTTAATTTGGTTGTATGTGTGGAAAAG GTGCATTTGAGAGGAGTAGGTATATGAACATGGTGGTTCAAAGGGCTTGCCATCCTCAGCTTAGATACTACTTACATTCT ACTGTTTCAGGACTTTTTCCCTTTCTACAAAAGGTTGGTCTTGTTGGTAATGTGGTTTTTTTTTGTTGTATTCAATTAGT CAACGTTGTCGAAGTTGTTGATGATTGCTTGCTATGGAATTGAATAACAGAATTCAGAAGTAACTGAGTATATCACTATA TCTTGTGCCTGTTATTTGGTAATGGCAATGTAATTTTGTTTCATTGTGGTAAAGAAAAATCCATCAATAGAGTTAGGGGA TTAGGATTGATTATAGCTTCTGGCTAGTCTGGAGGTTCAGACTTAGTGTTTCTCTCAATCCAACATGCTTACTACCTACA AAGTTTCATCTTAGAAGGGAAAAAATTACTTTCTTGCTATGGTGCTCATTTTGTCATTGGATCAGTTCATCAACATAACT TAACCATCCTCAACCTAACTACAGTGCCTTATCTGGGCATAGGGAAGATCATATTTGCTGGGTAGGAACTCAAATGCCAA CACAATGAAGAAGATCTTTGGTCTCATTGTTGTGGACAAGCTTTTCCTTAAACTCATGATTGGTTTTGAGTTGTCCTGCT TTTTGTCCGGAATCCTAATGCTTATACAGGCTTTTTGACCAATTTAATATGAAGAAAAACTTGACCAATTAAATATAGTT AAAATTTGTATTACCATTATGGTGTTGTTTGGCCCATTGTTGCTTTGGGCTCCCCTTTCACCCCCAACAAGGTTCAGCCC CGCCCTGAGTGTGAGGAGGGTTTTTTAAGGTCCCACATTTGACTAGAGATATGATCAAAATACTCTTTAGAAAATGTAGG GAATCCTCACCCCTAAGCTAGCCTTTTTGGTGGAGTTAGTTTATAGCCCAAATTTTAAGAGGTTTAATTAATGCAATTCC TTTCTTTTTGTCTCTGAAATCATAACAATTATTGAAAATTTGTATATTATGATATTTTAGGTGACTACATACACTTTTGA ATGCCTTAGGATCTTTGCTTTTTACTTACAATTTATACTGACGAGAAGTTCAGTTGATAGACAATATGCTTATATTTATA TAAGAAACATTTAAAGGTTACATCCCTCAGTTTCTTTTGTCATCAATTGAGAACTAGGTTTTATATCATATTCTAAAGAC TGCATCAAAGAAATGCAATTTTTCCTTTCTTAGAGTGAGCGTTTTTGTGTAATCATGTATGTTATTACCACTTGGTCAAA TGTGATTGTGTTGATTAGCTAGTGATTAAGCTGTAAGATAGCTTGTAATTGCTTCCTAATTTTCTTTGCTCCATTGACTA ATTATAGTCAAAGTACAAAATAAGAGATCAAGTAAGCCCCCACACCACACTTAATTTCACTCAAACACATTGTACAAAAA TAAGTCAATTGCTCACTAACAAGTCATTATGCTAATTTTTTTTTATCAAGATTTAAATGATTCAGTAGCTGAGTGGAGGT CCACTATACTATACAAAACAGCCCTCCCTGTCACATCCAACTTTCCTTGCAACTCCTTTATTTTGGCATGCTGATTTTTG TCCCTTACTTTCCATTTACTAGGGTATGGTAGAAAGAGTGGCTGTTATTTTCTTCAATGCTGAAAATATTCCACTGGAGA AGTTTGTTTTCAAGCTTTCAGTGAACCAGACTTATGGTGCAGCAGTGGATGAGGTTGATCTTGAGTTCTCTCTCAGATCA TTCCTGATCAAGCTGTCAATCTCAGAATCTCTTACTAAGGAGATTCCTGCTGGTAAATAGAAATATAATCATGCTGCAAA GTACTCTGCTTCTCCTTTCCTTGTTTTCTTTTGGCTTAATTACACTTTTGATTCTTTACTATAACTAATATGTCCAATGA TTTTTTTGTAGCAATGAAATCCCCCAATTTTATCTAATTGAAAAAATATTAGATTCTTCTATTGGTCTACCGCTTACCAG GGTTGTCAATGGTTATAGCGTCGTAGCGGCCCTTGGCCACTACTAGTTGTTGCGTAGCGGTGTAGTTCAGTCTTCAGTGT AGCGGCTGTTGCGGCCACTAAAGCGGAGGAAATAGAAGCCATAGCGGCGCTATTTGGTGGAACTGATAAAAACCCAAAAA CAACCCACAAAAAGTTCAGTTAGGGCAATTTGGGGAGGTATCTCAAGGATTTTTCTGTTGAAAGATACTGAAAATGGTCT AGTTTGAGGAGGATGAGGAGGATGAGGAGGATGAGGAGGAAGTGATATAGAACTTTCATGTTTTTAGACACTAGATTTAG GAATTAGTGACTTGACTTCTTGGTTACCTTGACTTTTTTTGGTACTAGTATGTTTTGCTTAAGACACCTATGACTTTTTA ATGTTAACTATAAGTACCATGAATTTTAAGTATTTTGTTTATCATTTATATGTACATAGTTATATTATTAGATAAGCTAT ACAAAATATTCAGCATAGCTTCCATCCCGCGATGGTTGGCCGTTAAGCGCCGCTCTCTGAGATTGACAACGCTGCCGCTT ACTAATAGAAGTTAGTGATGTGGTAATGTGGTTAATGATTTAATGGGCCAAACTGATGACTTTAATCTATTTAAGTATCT CATTTTATATTTGATCTATTTATATTTGGGATTTAAATAAATTAAAGCCACTTGTTGTTCATTACTTCAAAAAGTATCAT GTCATATATATGTAAGCAATTCAACAAGTCACTCACTTTAGTCAGTAGTTGAACAACAGCCTGATTAAGGATCTGAATTT TCTCTCAGAAAATTTGGGAGACTAAAACCACACTTAAACCATAGTTGAGAGACTAAAGTTCAATGAAGCCTTTTCTTTTT CACTTCATCTCATCGTTGTAAATTTGTAATAAGCCCTTTCTCTCATGCACTTTTGAACATGTGTGCACAACACTACAGAC ACATTGCACACTGACATACCCATATCATCTATTTCAGTTCATAACTTCATATAGGTTGCTACTTATGAATCAAGTAGAAA TGGTTTGGTACTTTTGTGTTTAGTACATTTGTACACACCACATGTTGAACTTTTTTCTTTGGTATTTATAAACTGAAACC CAGGTCTACTTTTAACCACTCTCTAAACAGATTCCAGGTGGGAGATAACTGCGTACTTTCGATCCCTTCCCGAGACTGGT ACAGCCAAGGACATCTGGATCCCAACTGACACAAAGCCGTGGCAGCAGCCTCCGCTTATAACCCCTATCAAGTCAATGAG TAGTGAGCCTCTGTGTTTGCAGTTGTACTTAGAGCATCCGAGTTTATCAGAATCAATGCTTTGAGAAGGGTCAGATGATG TACACATATAAACATGTATGGCAAGAATGTAGGTACTGTTTTTTATTTAATAATTCATGTCCCATTTGTTTATATTTTTA TGTGTTTTAGATTCATCAGATAATCAGCATACTTTTACTGAAATTTGCTGATGTCTTTTCCACGAGTGTGTGTTTGGATA CTAGTTGAGTGCAACGTGAACAAACTTTCATCTCAATTCATAAGAGTTCCATTCACTTTTTGTCTTGAAGTGAGAGCTAA CGTCCGTTTGCACTTGTGCCAACAGGTATCCAAACATAGAAATAGCTACACCTTGAAGGTAAAATCTTAAACAATAATAT GCACCTATGTCACCTACTAGAAGAATGTAACAATTACTCTTCATGTATTTTAATTTAGCTCTGAATGTAACAATGCTTGT ATCCTCTCTTGCTTATATTTGTTAACCAATTTTGTAGTAACTGGTTTTAAAGGTTTGAAATTGGCGTGAGCATTTATAAG ATTGCATTTTATTTTCTGTATAATATCTTCAGGGGATGTGTTATATAATTTTAGGTACATATTTGTCATTTTAAATATTT CAAGTAATAGCTAGTCTTGCACTGGGACTACTTTTGTTATATTACTAAGTTATACTTGTGGGAAATTCTACTGAATTTTT ATCTTTTTTTGATTGCAGCTATCAGCTTCAGAAGAAGTACAGGAATGCAGACTCCTTTGTTAGACCATGGAAAAATTTAA CCTACACAAGTAAAAACTTGTGTATGGTTGCACATTGGCCTTTTGACCCACTATAGCAGGTTTAAAAAAAAAATAAAAAA CATATTTTCTTAATTAAATATTTATTTTTAATTAATTTCAAAAAAAATATTTATTCTTAATTAATCATCTTTTCCTAACA ACCAAAACCCAGAAAAAAAAATCATTCTCATCATATCATATCATCCAACAAAAACCCATTAACCATCAGAACCCTAGCTG CCACCTCATTAGCCTCGTCGCCACACATCCATGGCCGTGCCGCTGCCGCCACCGCCACCTCCTGACCTCGTTTCCTTCTT CTCAACCGCACCTCCACCTCTTCTCCTCTTTCCTCCGTCGGCGCATTTCCCGGCGACCACAACACCCTCTTCCTCCCTCG ACGCCTTCCATATCTCTCCTCCACTTCTAGTCTCAGATCTGCGTGGAGGTGGCGTGTGTGTTTCAGAAGTTGCGATGGTT CTCCTTCTTGGGTCGTGTCCTCTTTGTTTCTCAGTGGTTGTGTTGCGATGAGACCACAAATCTGGTGGTGGAGGCGTTGA GGACCGCAACCGTACCTGCAGATCTGGTGCTTGTGGCGGTATTTGGCCTTAACGCTGCCCTTGCTTCTGCAGATCTGGAG GAAGGGAGAGGTGGTGACCGGCGGTGGGAAAATGATGGGTTTCTGAGTTTGCCTATGCACATGAGATGATTTGCACGGAG GTTATTAGGTTAATAGCTTTCATAAAAATTCTCTACGTTCCTGTAGGTTTTGGATGTTCAATGATATTCCAGAAAAATAG AGGGAAAATAAGTTAATTGATGGTGGCCTTGACATAAGTTGATTGGAAAATATATCTCTGGTTAATCGTGATACAAATCT GTTCAATTTTGTGGTCATAGTTTTCACAAATGAAGCTCTGATTTATATTCAAGAATTGTACTAGATGTAAGCTTTGCATA AATTGTATTGCCGGTGAAACTTGCACAAAATTAAGATTCTGGGGTTGAAAAAATGGATGAGATGAGACAATAGAGACATG TTATGATAATTTTGGAGTTGAAGGTTCATGTTTTCTTGCCTAAAACCCCACTACAGATCCAGAAAAACATTGCAAAATTC AGATCCAGGAAATGGATAATTGCAGAGGCAGAGAGCATTTTTCAGAGATGAAAGGGGAGAGAGGATAGTGAAGTAATTAA GGATAATTATCTAATTCTTCATTAACTAATTTACTAATATATATGTATTTTGATTTTTTTTAATACCTGCTAAACCTGCT ATTGTAGGTCAAAAGTAGCTTGTGTAACCTTACACAAGCATTCAATTGTGCACCGTAAATTCCTCCTTAGACCATGTACA ATGGTTTGTTTAATTTACCCCCTCTCAACCCCGCTTTTTCTTTTCCCAACACTCCACATCATCTTCTCTCTCCAATTCAA CACTCATTCAACTTTTACCCACTTCAATGGTTTTTCATTCAACACCCTACCCCACCACTCACCCTACCCCACCACTTTTT TATTTCATATTTTTATTTAATTTTATATTTTTGTTTTTATTATTTACATAAAATTACAATTATTGTTTTAAATTAAATTA AAACAATAAACACTTAACAAGATGGTGAGAAGAATTCTGGGTGTTGAAATGGTAATTGTTGAGATCTATTTCAAAACAAA GGCTGATAGAAAGGTAATAAGATGGTGAAAAACTTGGTTTTTTTTGTGTCTAAATCAAACGAACCAAGTCTCTATTTATA GAGGAAAAAAAGTTATGAATTTTGGTTAAAAAAGTTTTTGCAATTTTGTTTTCAACGAGATAATTCAGTTTAAAAGATTT AAAAACAAAAAATCCGCCCAACCAATCAGGTGCTGCCACGCGTCCCAACCCAATCTCCAGCCGTTTCTCTCTCTCCCTCC ACTGCAACTGACGCGCCCTGTCGGCGCGTGTGGTGCACGTGCCTTGGCGTGACCACTCGCGTGCTGCCACGTGGCTCCGG GCAGCTCTCTCAACAATGTTTAACCCTCTCAACACTTCTCTCCTCCACCTCATCTTCAACAAAACCTCAACAACCACTAC AAATCCTCAACAAACTTCAACATCCCTCTAAACATACCATTGCAAATGGTCTTACATGTTTGCTTATGTGTTTGAAACCA CTGTGATTTTCAAGGACATATGTTAGGAACCCAATTGCAAGGTATGCATGGGACTTGAGTCCCACAGTGGAAGTATGAGA ATCTAATGAGGTTTATAAGGTCTTGGGCTCTCCAACTACAACAACTAGCTTTTGTGGTATGGTTCTCCCAAGGTTTTAAT CTACATAGTTCAAGTCAGGGATGACCAGTGGTGGAAAGCTCTATCTTCATGTTGTCACTTATGTGAACCAGTGGGCAGCA ACATCTATCTGGGAAGCATTGATCTTATTATTTCAGTTTTAAAGCCTATGGGTCAAATGATCCTTTTGCTTAGTAGATCA TTCAGTAATCACTTTATTGTCGCAGAGTTGTGTTGGGCAGAACCAGTGTACAGTGACAGTGTCACCTGAAAATTTTGGAG GAGATCCATGTCCAAATGTCATGAAGAAACTTCCAGTGGAAGCCATTTGCACCTGCCACCTGATCATTTTGCTGACGCGG TACACTGTTTCTTTTGTTGGTTGATGGCATTTATTATGTATGCTTCACTGATCAATGTGGTTCTTCTTGTTCTATGCAAC TCAAAATTTACTGATTGAAGTGGCAGCAGATTCACTAAATGATGGACTTCAAGAGGAAATAGATGCAATATGTAGTATTA CAACTTGCCAACTTCAATGTAGGAGGCACTCATAAAGGACGCGGAAATTGAATAGAAAATGAGGTGTTCCAAAGCTTTTG CCAGACCAAGCTACCATTAATTCATGCATTCTGCCAATCTAAGTTGGTTGATTCCGTGGTGAAGTTGAATAAATACAACG AGACTAGCTTAATATTGTGATGAAGAATAAGAAGTGACTGACCAATCATGCTTCTCCTTTCCATGAGTTTGTGTTATTTT GTATCTGTCATTTCATTTGTATCAAGTAGAAAACTGTATAGTTTGAACTAGTATTGTGGAAAATCATTTATACCCCAAAT AGTTTTAGTTATTGTTTGTTCC
CDS sequence (LotjaGi3g1v0369800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGCGCGGAGAGAATCAAACTCCGCAAGGCCAAACAGCTCAAGTTTTGGTTGAATTTTTGGAGGTGGCTATCACTGC TGTTGTTTTTCTCAAAGGGGTTTATCCTTCTGGTGCATTTGAGAGGAGTAGGTATATGAACATGGTGGTTCAAAGGGCTT GCCATCCTCAGCTTAGATACTACTTACATTCTACTGTTTCAGGACTTTTTCCCTTTCTACAAAAGGGTATGGTAGAAAGA GTGGCTGTTATTTTCTTCAATGCTGAAAATATTCCACTGGAGAAGTTTGTTTTCAAGCTTTCAGTGAACCAGACTTATGG TGCAGCAGTGGATGAGGTTGATCTTGAGTTCTCTCTCAGATCATTCCTGATCAAGCTGTCAATCTCAGAATCTCTTACTA AGGAGATTCCTGCTGATTCCAGGTGGGAGATAACTGCGTACTTTCGATCCCTTCCCGAGACTGGTACAGCCAAGGACATC TGGATCCCAACTGACACAAAGCCGTGGCAGCAGCCTCCGCTTATAACCCCTATCAAGTCAATGAGTAGTGAGCCTCTGTG TTTGCAGTTGTACTTAGAGCATCCGAGTTTATCAGAATCAATGCTTTGA
Protein sequence (LotjaGi3g1v0369800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MERGENQTPQGQTAQVLVEFLEVAITAVVFLKGVYPSGAFERSRYMNMVVQRACHPQLRYYLHSTVSGLFPFLQKGMVER VAVIFFNAENIPLEKFVFKLSVNQTYGAAVDEVDLEFSLRSFLIKLSISESLTKEIPADSRWEITAYFRSLPETGTAKDI WIPTDTKPWQQPPLITPIKSMSSEPLCLQLYLEHPSLSESML
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 195 | 195 | 2.5E-63 | – | |
| PANTHER | 1 | 195 | 195 | 2.5E-63 | – | |
| Gene3D | 4 | 195 | 192 | 2.1E-43 | ||
| SUPERFAMILY | 8 | 192 | 185 | 5.23E-36 | ||
| ProSiteProfiles | 11 | 192 | 182 | 33.287 | ||
| Pfam | 16 | 128 | 113 | 1.2E-7 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0369800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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