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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0381600 |
| Transcript ID | LotjaGi3g1v0381600.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | C2 calcium/lipid-binding and GRAM domain protein; TAIR: AT4G11610.1 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein; Swiss-Prot: sp|Q9FL59|FTIP1_ARATH FT-interacting protein 1; TrEMBL-Plants: tr|A0A072TQ03|A0A072TQ03_MEDTR Calcium-dependent lipid-binding (CaLB domain) family protein; Found in the gene: LotjaGi3g1v0381600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:77453470..77456490) extracted from Lotus japonicus Gifu genome v1.2.
ATGAGCAATCTCAAGCTAGGCGTGGAAGTTGTGGATGCTCATGACCTTATCCCCAAAGATGGGCAGGGCTCATCTAGTGC TTTTGTGGAACTTCACTTTGATGGTCAGAAATTTCGAACAACTACCAAAGAGAAAGATCTGAATCCTGTTTGGAATGAGA AATTTTTCTTCAATGTTACTGATCAAAACAAATTACCAATCCTCACTCTTGATGCCTATGTCTACCACTATGACAAAAAC AATGGTCCCAAAGTCTTCCTTGGTAAGGTCCGTCTCACGGGAACCTCATTTGTCCCTTATTCTGATGCTGTTGTTTTGCA CTACCCTCTCGAGAAGAAATTCGTTTTGTCCCGCATAAAAGGAGATCTTGGATTGAAGGTATTTGTTACAGATGATCCTT CAATAAAATCCCCAAGCCATCCTCCTGCTGTGGAACCCTCGATGGATACTGATCAGCACTCAACACAAGACCAATCACCG GTATCATTTACAAGTTCAATCCTAAATGTCTTTTCTCGTAAGAAGGATGCGTCAAGGCAGACATTCCATAGCATTTCTAA TTCAAATCAAGAAGAAAAACATAAATCTTCTCCTCCAGCAGATGCAAAGACTACTTCAAACCATGGAATGCATGAGATGA AATCTGGACAGCCTCCCCCTAGAGTTTTACGGCCATATGCAGGTTCATCCTCTCCAATTGATTATGCACTCAAAGAGACA AGCCCTTTTCTTGGAGGGGGACAAGTAGTTGGTGGGCGAGTAATACGTGGGAACAGGACAGTGAGCACCTACGACCTGGT TGAACCAATGCACTACCTTTATGTACGAGTTGTAAGAGCTCGTGACCTTTCATCAAAAGGGAGCCTTGATCCATATGTGG AGGTAAAGGTTGGAAACTTCAAAGGAACCACCAAGCACTTTGAGAATACTCAAGAACCTGAGTGGAATGAGGTGTTTGCC TTTGCAAGGGACAATATGCAGTCAACAAAGCTTGAAGTTGTGGTCAGAGACAAAGGTATGTTACTGGATGAAAATGTTGG AACTGTCAGGTTTGATCTCCATGAGGTTCCTACAAGGGTTCCACCCAATAGTCCATTGGCTCCTGAATGGTATAGGTTTG ACAAGAGTGGGAACAAGAAGAAAGGGGAGTTGATGCTTGCTGTATGGTTTGGCACACAGGCTGATGAAGCTTTTCCTGAT GCTTGGCATTCTGATACACTCTTTACTGGTGAAAGCTCTTCATTTGCCTATGCTCAGATGCGATCAAAAGTTTACCATTC ACCAAGGTTATGGTATGTACGGGTTAGAGTGATTGAGGCGCAGGACTTACTTGCATCAGAGAATTCCAAAATCCCAGATG CCTATGTTAAGGTACAGATTGGTAGCCAGATCTTGAAAACAAAGCCAGTTCAATCAAGGACCATGAACGTGCGTTGGGAT CAGGAGCTGATGTTTGTTGCTGCTGAACCCTTTGAAGAACATTTGGTCCTTTCAGTTGAAAATCGTATTGGTCCCAACAA GGATGAGACTATGGGAGTAGTTGCCATTCCTTTGACCCAAGTTGACAAGCGTGCTGATGATAGAATTATGCGTACTAGGT GGTATAACCTTGAAGAATCCATGTCATCTGCGATGGATGGGGAACAAGAGAAAAAGAAGGAAAAAGATAAATTTTTTAGT AGACTTCACCTCAGTGTCTGTCTTGATGGTGGGTACCATGTTTTTGATGAGTCAACTAATTATAGTAGTGATCTTAGACC CACATCAAGGCAGCTCTGGAAGAAGCCAATTGGTATCTTAGAACTCGGGATTCTAAGTGTTGATGGACTTCATCCAATGA AAAGCAAGGAGGGAAGGGGGACATCAGATGCATACTGTGTGGCAAAATATGGGCAAAAGTGGATTCGTACTCGAACTATC AGTGACAGTCCAAGCCCAAAATACAATGAGCAGTACACTTGGGAAGTTTTTGATCCAGCTACAGTTCTCACTGTGGGGGT GTTTGACAACGGGCAGCTTACTAGCCCAGATGGTAGCAAGGATTCAGTAATTGGTAAAGTTCGGATCCGAATCTCCACCT TGGAAGTTGGCCGAGTTTACACAAACTACTACCCGTTACTAATGCTTCATCCTTCTGGTGTCAAAAAGATGGGAGAGCTG CACCTGGCCATTAGATTCTCCTGTTACTCAATGGTTGACTTGATGAACTTGTATTTCAAGCCTCCCTTGCCGAAAATGCA CTACAAAAGGCCACTTGACGTAATGGAACAAGATAAGCTGCGACACCAGGCTGTCAATGTTGTTGCTGCTCGTCTTAGCA GGGCAGAACCCCCACTTAGAAAGGAGGTAATTGAGTACATGTCTGACACAAATTTCCATCTATGGAGCATGAGACGAAGC AAGGCAAACTTCTACCGTCTGATGACGGTGGTTTCCGGAATCCTTTCAGCCGGGCGATGGCTTGGGGATGTTTCCACATG GAAGCATCCTGTCACCACTGTGCTCGTGCACATTCTTTTTGTGATGCTTGTGTGTCTCCCTGAGCTCATTCTGCCAACCA TATTTCTGTACATTCTTGTGATTGGGATGTGGAACTGGAGGTTCCGCCCGAGATGCCCTCCTCACATGAACACCAAGCTC TCTTATGCAGATGGTGTGAGCCCGGACGAGCTTGATGAGGAATTCGACACCTTTCCTACCTCAAAGAGCCCCGACGTCGT GCGTTGGAGGTATGACAGGATGAGAAGTGTGGCTGGAAGGATTCAGAGTGTTGTTGGAGACATGGCCACTCAAGGAGAGA GGATGCAAGCACTGGTGAGCTGGCGTGATCCTCGTGCCTCTGCGATGTTCATGTTGTTCTGCTTTGTGGCTGCTATTGTG TTGTATATGACACCCCTTCAGCTTCCTATTCTCCTAGCTGGATTCTACTCCATGAGGCACCCAATGTTTAGGAGTAAGGT ACCAGCAGCACCAGTTAACTTCTTCCGCAGGTTGCCTTCCCTCACAGATAGCATGCTGTAA
CDS sequence (LotjaGi3g1v0381600.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGCAATCTCAAGCTAGGCGTGGAAGTTGTGGATGCTCATGACCTTATCCCCAAAGATGGGCAGGGCTCATCTAGTGC TTTTGTGGAACTTCACTTTGATGGTCAGAAATTTCGAACAACTACCAAAGAGAAAGATCTGAATCCTGTTTGGAATGAGA AATTTTTCTTCAATGTTACTGATCAAAACAAATTACCAATCCTCACTCTTGATGCCTATGTCTACCACTATGACAAAAAC AATGGTCCCAAAGTCTTCCTTGGTAAGGTCCGTCTCACGGGAACCTCATTTGTCCCTTATTCTGATGCTGTTGTTTTGCA CTACCCTCTCGAGAAGAAATTCGTTTTGTCCCGCATAAAAGGAGATCTTGGATTGAAGGTATTTGTTACAGATGATCCTT CAATAAAATCCCCAAGCCATCCTCCTGCTGTGGAACCCTCGATGGATACTGATCAGCACTCAACACAAGACCAATCACCG GTATCATTTACAAGTTCAATCCTAAATGTCTTTTCTCGTAAGAAGGATGCGTCAAGGCAGACATTCCATAGCATTTCTAA TTCAAATCAAGAAGAAAAACATAAATCTTCTCCTCCAGCAGATGCAAAGACTACTTCAAACCATGGAATGCATGAGATGA AATCTGGACAGCCTCCCCCTAGAGTTTTACGGCCATATGCAGGTTCATCCTCTCCAATTGATTATGCACTCAAAGAGACA AGCCCTTTTCTTGGAGGGGGACAAGTAGTTGGTGGGCGAGTAATACGTGGGAACAGGACAGTGAGCACCTACGACCTGGT TGAACCAATGCACTACCTTTATGTACGAGTTGTAAGAGCTCGTGACCTTTCATCAAAAGGGAGCCTTGATCCATATGTGG AGGTAAAGGTTGGAAACTTCAAAGGAACCACCAAGCACTTTGAGAATACTCAAGAACCTGAGTGGAATGAGGTGTTTGCC TTTGCAAGGGACAATATGCAGTCAACAAAGCTTGAAGTTGTGGTCAGAGACAAAGGTATGTTACTGGATGAAAATGTTGG AACTGTCAGGTTTGATCTCCATGAGGTTCCTACAAGGGTTCCACCCAATAGTCCATTGGCTCCTGAATGGTATAGGTTTG ACAAGAGTGGGAACAAGAAGAAAGGGGAGTTGATGCTTGCTGTATGGTTTGGCACACAGGCTGATGAAGCTTTTCCTGAT GCTTGGCATTCTGATACACTCTTTACTGGTGAAAGCTCTTCATTTGCCTATGCTCAGATGCGATCAAAAGTTTACCATTC ACCAAGGTTATGGTATGTACGGGTTAGAGTGATTGAGGCGCAGGACTTACTTGCATCAGAGAATTCCAAAATCCCAGATG CCTATGTTAAGGTACAGATTGGTAGCCAGATCTTGAAAACAAAGCCAGTTCAATCAAGGACCATGAACGTGCGTTGGGAT CAGGAGCTGATGTTTGTTGCTGCTGAACCCTTTGAAGAACATTTGGTCCTTTCAGTTGAAAATCGTATTGGTCCCAACAA GGATGAGACTATGGGAGTAGTTGCCATTCCTTTGACCCAAGTTGACAAGCGTGCTGATGATAGAATTATGCGTACTAGGT GGTATAACCTTGAAGAATCCATGTCATCTGCGATGGATGGGGAACAAGAGAAAAAGAAGGAAAAAGATAAATTTTTTAGT AGACTTCACCTCAGTGTCTGTCTTGATGGTGGGTACCATGTTTTTGATGAGTCAACTAATTATAGTAGTGATCTTAGACC CACATCAAGGCAGCTCTGGAAGAAGCCAATTGGTATCTTAGAACTCGGGATTCTAAGTGTTGATGGACTTCATCCAATGA AAAGCAAGGAGGGAAGGGGGACATCAGATGCATACTGTGTGGCAAAATATGGGCAAAAGTGGATTCGTACTCGAACTATC AGTGACAGTCCAAGCCCAAAATACAATGAGCAGTACACTTGGGAAGTTTTTGATCCAGCTACAGTTCTCACTGTGGGGGT GTTTGACAACGGGCAGCTTACTAGCCCAGATGGTAGCAAGGATTCAGTAATTGGTAAAGTTCGGATCCGAATCTCCACCT TGGAAGTTGGCCGAGTTTACACAAACTACTACCCGTTACTAATGCTTCATCCTTCTGGTGTCAAAAAGATGGGAGAGCTG CACCTGGCCATTAGATTCTCCTGTTACTCAATGGTTGACTTGATGAACTTGTATTTCAAGCCTCCCTTGCCGAAAATGCA CTACAAAAGGCCACTTGACGTAATGGAACAAGATAAGCTGCGACACCAGGCTGTCAATGTTGTTGCTGCTCGTCTTAGCA GGGCAGAACCCCCACTTAGAAAGGAGGTAATTGAGTACATGTCTGACACAAATTTCCATCTATGGAGCATGAGACGAAGC AAGGCAAACTTCTACCGTCTGATGACGGTGGTTTCCGGAATCCTTTCAGCCGGGCGATGGCTTGGGGATGTTTCCACATG GAAGCATCCTGTCACCACTGTGCTCGTGCACATTCTTTTTGTGATGCTTGTGTGTCTCCCTGAGCTCATTCTGCCAACCA TATTTCTGTACATTCTTGTGATTGGGATGTGGAACTGGAGGTTCCGCCCGAGATGCCCTCCTCACATGAACACCAAGCTC TCTTATGCAGATGGTGTGAGCCCGGACGAGCTTGATGAGGAATTCGACACCTTTCCTACCTCAAAGAGCCCCGACGTCGT GCGTTGGAGGTATGACAGGATGAGAAGTGTGGCTGGAAGGATTCAGAGTGTTGTTGGAGACATGGCCACTCAAGGAGAGA GGATGCAAGCACTGGTGAGCTGGCGTGATCCTCGTGCCTCTGCGATGTTCATGTTGTTCTGCTTTGTGGCTGCTATTGTG TTGTATATGACACCCCTTCAGCTTCCTATTCTCCTAGCTGGATTCTACTCCATGAGGCACCCAATGTTTAGGAGTAAGGT ACCAGCAGCACCAGTTAACTTCTTCCGCAGGTTGCCTTCCCTCACAGATAGCATGCTGTAA
Protein sequence (LotjaGi3g1v0381600.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSNLKLGVEVVDAHDLIPKDGQGSSSAFVELHFDGQKFRTTTKEKDLNPVWNEKFFFNVTDQNKLPILTLDAYVYHYDKN NGPKVFLGKVRLTGTSFVPYSDAVVLHYPLEKKFVLSRIKGDLGLKVFVTDDPSIKSPSHPPAVEPSMDTDQHSTQDQSP VSFTSSILNVFSRKKDASRQTFHSISNSNQEEKHKSSPPADAKTTSNHGMHEMKSGQPPPRVLRPYAGSSSPIDYALKET SPFLGGGQVVGGRVIRGNRTVSTYDLVEPMHYLYVRVVRARDLSSKGSLDPYVEVKVGNFKGTTKHFENTQEPEWNEVFA FARDNMQSTKLEVVVRDKGMLLDENVGTVRFDLHEVPTRVPPNSPLAPEWYRFDKSGNKKKGELMLAVWFGTQADEAFPD AWHSDTLFTGESSSFAYAQMRSKVYHSPRLWYVRVRVIEAQDLLASENSKIPDAYVKVQIGSQILKTKPVQSRTMNVRWD QELMFVAAEPFEEHLVLSVENRIGPNKDETMGVVAIPLTQVDKRADDRIMRTRWYNLEESMSSAMDGEQEKKKEKDKFFS RLHLSVCLDGGYHVFDESTNYSSDLRPTSRQLWKKPIGILELGILSVDGLHPMKSKEGRGTSDAYCVAKYGQKWIRTRTI SDSPSPKYNEQYTWEVFDPATVLTVGVFDNGQLTSPDGSKDSVIGKVRIRISTLEVGRVYTNYYPLLMLHPSGVKKMGEL HLAIRFSCYSMVDLMNLYFKPPLPKMHYKRPLDVMEQDKLRHQAVNVVAARLSRAEPPLRKEVIEYMSDTNFHLWSMRRS KANFYRLMTVVSGILSAGRWLGDVSTWKHPVTTVLVHILFVMLVCLPELILPTIFLYILVIGMWNWRFRPRCPPHMNTKL SYADGVSPDELDEEFDTFPTSKSPDVVRWRYDRMRSVAGRIQSVVGDMATQGERMQALVSWRDPRASAMFMLFCFVAAIV LYMTPLQLPILLAGFYSMRHPMFRSKVPAAPVNFFRRLPSLTDSML
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 1 | 91 | 91 | 14.334 | ||
| Phobius | 1 | 719 | 719 | - | – | |
| Gene3D | 3 | 160 | 158 | 1.8E-22 | ||
| SUPERFAMILY | 5 | 143 | 139 | 5.51E-24 | – | |
| PANTHER | 5 | 1006 | 1002 | 0.0 | – | |
| PANTHER | 5 | 1006 | 1002 | 0.0 | – | |
| CDD | 5 | 131 | 127 | 1.83135E-62 | – | |
| Pfam | 5 | 93 | 89 | 2.8E-17 | ||
| SMART | 5 | 106 | 102 | 1.8E-12 | ||
| MobiDBLite | 131 | 160 | 30 | - | – | |
| MobiDBLite | 179 | 228 | 50 | - | – | |
| Gene3D | 254 | 391 | 138 | 1.7E-23 | ||
| Pfam | 272 | 357 | 86 | 4.3E-16 | ||
| SMART | 272 | 365 | 94 | 8.3E-16 | ||
| SUPERFAMILY | 272 | 407 | 136 | 8.73E-31 | – | |
| CDD | 272 | 392 | 121 | 2.44065E-58 | – | |
| ProSiteProfiles | 273 | 350 | 78 | 12.691 | ||
| Gene3D | 415 | 565 | 151 | 2.4E-21 | ||
| Pfam | 431 | 537 | 107 | 3.0E-16 | ||
| SUPERFAMILY | 431 | 589 | 159 | 2.56E-26 | – | |
| CDD | 432 | 587 | 156 | 8.99439E-71 | – | |
| SMART | 432 | 530 | 99 | 4.1E-11 | ||
| ProSiteProfiles | 433 | 515 | 83 | 10.323 | ||
| Gene3D | 583 | 728 | 146 | 5.6E-24 | ||
| SUPERFAMILY | 598 | 728 | 131 | 1.99E-24 | – | |
| Pfam | 598 | 706 | 109 | 1.1E-20 | ||
| CDD | 599 | 723 | 125 | 6.86373E-61 | – | |
| SMART | 599 | 703 | 105 | 4.6E-13 | ||
| ProSiteProfiles | 600 | 688 | 89 | 8.725 | ||
| Phobius | 720 | 739 | 20 | - | – | |
| Phobius | 740 | 803 | 64 | - | – | |
| Phobius | 804 | 822 | 19 | - | – | |
| Phobius | 823 | 833 | 11 | - | – | |
| Phobius | 834 | 861 | 28 | - | – | |
| TMHMM | 839 | 861 | 23 | - | – | |
| Pfam | 851 | 1006 | 156 | 4.9E-74 | ||
| Phobius | 862 | 949 | 88 | - | – | |
| Phobius | 950 | 976 | 27 | - | – | |
| TMHMM | 952 | 974 | 23 | - | – | |
| Phobius | 977 | 1006 | 30 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0381600.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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