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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0384200 |
| Transcript ID | LotjaGi3g1v0384200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Glycerol-3-phosphate acyltransferase; TAIR: AT4G00400.1 glycerol-3-phosphate acyltransferase 8; Swiss-Prot: sp|Q5XF03|GPAT8_ARATH Probable glycerol-3-phosphate acyltransferase 8; TrEMBL-Plants: tr|G7LBQ7|G7LBQ7_MEDTR Glycerol-3-phosphate acyltransferase; Found in the gene: LotjaGi3g1v0384200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:77868181..77872514) extracted from Lotus japonicus Gifu genome v1.2.
GTGAATTTCTAAGGACAAATCCGTAATTATCAATAACTAACTACTAATATTTGTCTATAAAAAAAATATTGCGTGAATTT CCAAGGACAAATCCGTAGTTTGCTATTGCGGAGAGAACATTTAAAACGCGAGGTGCCTCCCACCCTCCACTCTCGCCTTC TCAGTGTAAGAGAAGAAGAGAGTTTACAGCTGTCACACGCCGTAACAGAAAATGGCAACGGCGAAACCGAAACGTAACTT CCCTCCGATAACAGAATGCAACGGAACTGCTTCGTCGGCGCGTGAGTCCGTCGCCGCCGACCTCGACGGCACGCTTCTCA TCTCCCGGAGCTCGTTCCCGTACTTCATGCTCGTCGCCGTCGAAGCCGGAAGCCTCTTCCGTGGCCTCATCCTCCTCCTC TCCCTCCCCTTCGTCATCGTCTCCTATCTCTTCATCTCGGAAGCCATCGGAATCCAGATCCTCATCTTCATCTCCTTCGC CGGACTCAAAATCCGCGACATCGAGCTCGTCTCACGCGCCGTTCTTCCCAGGTACGCTCTCACACACTCACAGTGTTTGT TAATTTCTGCATCGGTTCGATCTGAGACGCACTTTGCAGGTTTTATGCGGCGGATGTGAGGAGGGAGAGCTTTGAGTTGT TTGATCGGTGCAAGAGGAAGGTGGTGGTGACGGCGAACCCGACGGTGATGGTGGATGCGTTTGTGAAGGACTTTCTCGGC GGGGATAAGGTGTTGGGAACTGAGATTGAGGTGGATCCGAAGACGAAGAAAGCTACTGGGTTCGTGAAGAAGCCTGGTGT GCTGGTGGGAGATCAGAAGCGTTTGGCGATTTTGAAAGAGTTCGGTGAGGAATCGCCTGATATTGGACTTGGAGATCGTA AAACTGATCACGATTTCATGTCTATTTGCAAGGTTTGGCTTCTTCTATTTAATAATTATCAAGATTTAATTATTTTTATG CAGATTAGTTTTGTATGAATATATAGCAATTAAGAGATGAAGAAATTGTTTAATTTGTTCATTAACTAATCTAAACACTG ATGATCACTGAGTTAATCAATTAACATTACCAATTATAGATGGTGATCTTTATTGAACTAAAAATGAAAGGGTCAAGGAA ATTCCTTAATATAGAAAAGGCTTTTGATTAATTTCACTTTCATCATCTTTCTATTAGCTTTCTCTTTCAATTGTTTTTTT TTATCATATTTTTTATTTTTCTGTCTCTCATTTTCTTATTTCTCTTTTGATGTAAATGTGTTTTAAGTGTGAACATAATC ATTATTGAAAAAGAAAATTATTAGTTCATGCAAATTAAAGCTAGCTCACACATATTTAATTTCTTGAATAACTTATAGAA CAGTGTACTTGAAAAGTATACATTGAACTAAAAAGTGGATTAATGGCTCGTTGGGCTCATTACTTGGAAAGCAGCTTCTT GCATTAATTATGACTGCAATATGTGATCAAACTGATCATGCATTTTATGTGTACTACTGATTAATATATTTAACATAGGG TATTAATTAATGCTATCCAAAAACGATAGTAGAATTAATTTGGTTTCCCTATATGCAAGATTATTAAGTTGACTATAGGA CGTACTACTTGTGAACCCTTTCTTCAAAAAAAAAATTGGGTAGAAAAGAATGATATGTTTTTGTTGCTGAAAAATTAATT ACTAGATTATTGTATACAAACAAAAATTTAATTACAAGATTAGATAATAAGAAGATTAGGTGGATTAGGCAAATGGAGAG AGATTTGAATTTGGTGCAGTTGAGGGCACTGCAATCACAAGGGTAGGTCGTTCGATTAAGATCTAACAAATTATGTTTCT GTAATGTGATTATTATCACTAATATGATTAAATATAAACCACCAGATCATAATCGAGTGAATTATCTATGTATTGACTGA CGGCAAAATGAGTGACTGCAGTCTTCTTCATCATGGGGCCGGGACATGAAGAATTGAAGGCAGCCGCATTAACCGCGATA GTTGAGATGAGCGTGAATGCTCTTTGTTTTCCTTCTTTTCCCAACCAGAAACTGTAGTCCAACCCCATGGGACCCACAGC ATTAACCAACCCCAACTAACTTCCAGCATGTGCACTTTGTGGCCCCTTCATTCATAATATACTGTGAAGCACCGTTCAAT GGCCTCATGGCCCATTGTGCTTCATATACACTTCTTGAGTAGCTAGCTTACCTATAAGTTTCTTTTCAATTAATGCACTA TGGTTTGTGATGATCTCACCCGCCCACAGGAAAGTTCTCCCCTCACAATACATACATGAAATTGTCCCAAGAATAGGATA CATTTTCCAGTTGGTACTAAAGTCACTGTAACAATTTCACCTCCAAATATAACACGCAGAAGTATAAGTGAAACAATAAC AACCTCTCAATCATATCAGGGCTTTAGAAAAACTGAGACACCATTCATTGTGTGTTATTTTCAGGACTTCTTCCATCCTA CTGAATTTCATTTGACAACATTGTGTCACCTTTACCTGATTAGTAAATTGTTAGCTAATTTATGTTTTTTTATTATAATA TTAAGTATTTATTAGTATTTCTTTTACTTTATATTTTAAGTTGTGCATCATGAATATTTGTCCTCTAGTATCTTAGAGAG ATACCCAAAAAGCCTCTTTAGTATGAATTGAAACTAGTAAATTTAAGAGTGTTAAAATATTATTAAACCACATAAAACTA CACTAATTTTATCACATAATTACTTATTACTTATGGTAATCTCTACAATTCTTTAAAAGAAAAAACCTTCAACCCTTTAT GAACAACTCCTATGATCTAATTAATTGTTGATGAAACTGCAGGAAGGGTATATGGTGCCACCAAGCAAATCAGCAAAACC AGTCCCACAAGACCGGCTGAAGAGCAGGCTCATCTTCCACGACGGCCGCTTCGTGCAGCGACCAGACCCACTCAACGCCC TCATCACCTTCACATGGCTCCCCTTCGGCTTCATCCTCTCCATCATCAGAGTCTACTTCAACCTCCCTCTCCCTGAACGC ATTGTCCGCTACACCTACGAAATGCTGGGCATCAAGCTCGTCATCCGCGGCCACCGCCCTCCACCACCATCCCCAGGAAC CCCCGGCAACCTCTACGTCTGCAACCACCGCACCGCCCTCGACCCCATCATCATCGCCATCGCCCTCGGCCGTAAAGTCT CATGTGTCACCTACAGTGTCAGCAAGCTCTCCCGCTTCCTCTCCCCCATCCCGGCGGTCGCGCTCACCCGCGACCGCGCC GCCGACGCCGCCCGTATCAAGGAGCTTCTCCAAAAGGGTGACCTCGTGGTGTGCCCTGAGGGCACCACGTGCCGTGAGCC TTTCTTGCTGAGGTTCAGTGCTTTGTTTGCAGAGCTCAGTGACCGGATTGTCCCCGTCGCCGTTGACTGTAAGCAGAGCA TGTTCTACGGGACCACCGTGCGTGGTGTCAAGTTCTGGGACCCTTACTTCTTCTTCATGAATCCTAGGCCGGTTTATGAG GCTACCTTCCTTGACCGGTTGCCGGAGGAGATGTCGTGTAAGGCCGGAGGGAAGTCGTCGATTGAGGTGGCGAATCATGT CCAGAAGGTGTTGGGGGATGTTCTTGGGTTTGAATGCACTGGCTTGACCAGGAAAGATAAGTATTTGTTGCTGGGAGGGA ATGATGGGAAGGTGGAGTCCATGTATAGTGGCAAGAAGCAGTGAAAGGTAATAATATAAGCTCTGCTTTTGGAAGAATTG AGTAATATTGTTGGTTTGATTGTTTCAGCGTTTATTGATCATAAGGAAAATGTTAGCTAGCAAATAGCAATGTGTATTTT TTTGGTGAACCCCTTTCAGATGGGGTTTTGTTATGGATTTGTAATGATTTAAAGAATTTAGAATATGTTTTTGAAGATCA CTTTCTATATATGTGACTTTAATTTTGTGGGGGGAGGGGGGCTACACTCATCCATTCAATGTCATTGATTTTTTGTTCAA TATCCATTTTAATGTCATTCAGTCTCTGCTTTAAGTCTTTCCCTTGATGGGTTGTCACGATGCATTTATCAGCAGATTCG TTGTATTCATGTTACTTGTTTTAATTAGGTGTTAGATTTGGCCTTTTAATGATTTTTGATTTTGATTACATAATGAATGT TACTTTTTTGCGCACCCTATAACTGCACCTTTTTATTCCAACACTACCAAATATTTATCTTTCTATAGAAGTAGTTAGAC AACTATTTAATCATTCATCTCTCATACAATTCTTCATGATTCTTAATAAATTCATTGCAGAGAAAACCTTTCAAGTTTCA ACTGTTGTAGTGAC
CDS sequence (LotjaGi3g1v0384200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAACGGCGAAACCGAAACGTAACTTCCCTCCGATAACAGAATGCAACGGAACTGCTTCGTCGGCGCGTGAGTCCGT CGCCGCCGACCTCGACGGCACGCTTCTCATCTCCCGGAGCTCGTTCCCGTACTTCATGCTCGTCGCCGTCGAAGCCGGAA GCCTCTTCCGTGGCCTCATCCTCCTCCTCTCCCTCCCCTTCGTCATCGTCTCCTATCTCTTCATCTCGGAAGCCATCGGA ATCCAGATCCTCATCTTCATCTCCTTCGCCGGACTCAAAATCCGCGACATCGAGCTCGTCTCACGCGCCGTTCTTCCCAG GTTTTATGCGGCGGATGTGAGGAGGGAGAGCTTTGAGTTGTTTGATCGGTGCAAGAGGAAGGTGGTGGTGACGGCGAACC CGACGGTGATGGTGGATGCGTTTGTGAAGGACTTTCTCGGCGGGGATAAGGTGTTGGGAACTGAGATTGAGGTGGATCCG AAGACGAAGAAAGCTACTGGGTTCGTGAAGAAGCCTGGTGTGCTGGTGGGAGATCAGAAGCGTTTGGCGATTTTGAAAGA GTTCGGTGAGGAATCGCCTGATATTGGACTTGGAGATCGTAAAACTGATCACGATTTCATGTCTATTTGCAAGGAAGGGT ATATGGTGCCACCAAGCAAATCAGCAAAACCAGTCCCACAAGACCGGCTGAAGAGCAGGCTCATCTTCCACGACGGCCGC TTCGTGCAGCGACCAGACCCACTCAACGCCCTCATCACCTTCACATGGCTCCCCTTCGGCTTCATCCTCTCCATCATCAG AGTCTACTTCAACCTCCCTCTCCCTGAACGCATTGTCCGCTACACCTACGAAATGCTGGGCATCAAGCTCGTCATCCGCG GCCACCGCCCTCCACCACCATCCCCAGGAACCCCCGGCAACCTCTACGTCTGCAACCACCGCACCGCCCTCGACCCCATC ATCATCGCCATCGCCCTCGGCCGTAAAGTCTCATGTGTCACCTACAGTGTCAGCAAGCTCTCCCGCTTCCTCTCCCCCAT CCCGGCGGTCGCGCTCACCCGCGACCGCGCCGCCGACGCCGCCCGTATCAAGGAGCTTCTCCAAAAGGGTGACCTCGTGG TGTGCCCTGAGGGCACCACGTGCCGTGAGCCTTTCTTGCTGAGGTTCAGTGCTTTGTTTGCAGAGCTCAGTGACCGGATT GTCCCCGTCGCCGTTGACTGTAAGCAGAGCATGTTCTACGGGACCACCGTGCGTGGTGTCAAGTTCTGGGACCCTTACTT CTTCTTCATGAATCCTAGGCCGGTTTATGAGGCTACCTTCCTTGACCGGTTGCCGGAGGAGATGTCGTGTAAGGCCGGAG GGAAGTCGTCGATTGAGGTGGCGAATCATGTCCAGAAGGTGTTGGGGGATGTTCTTGGGTTTGAATGCACTGGCTTGACC AGGAAAGATAAGTATTTGTTGCTGGGAGGGAATGATGGGAAGGTGGAGTCCATGTATAGTGGCAAGAAGCAGTGA
Protein sequence (LotjaGi3g1v0384200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MATAKPKRNFPPITECNGTASSARESVAADLDGTLLISRSSFPYFMLVAVEAGSLFRGLILLLSLPFVIVSYLFISEAIG IQILIFISFAGLKIRDIELVSRAVLPRFYAADVRRESFELFDRCKRKVVVTANPTVMVDAFVKDFLGGDKVLGTEIEVDP KTKKATGFVKKPGVLVGDQKRLAILKEFGEESPDIGLGDRKTDHDFMSICKEGYMVPPSKSAKPVPQDRLKSRLIFHDGR FVQRPDPLNALITFTWLPFGFILSIIRVYFNLPLPERIVRYTYEMLGIKLVIRGHRPPPPSPGTPGNLYVCNHRTALDPI IIAIALGRKVSCVTYSVSKLSRFLSPIPAVALTRDRAADAARIKELLQKGDLVVCPEGTTCREPFLLRFSALFAELSDRI VPVAVDCKQSMFYGTTVRGVKFWDPYFFFMNPRPVYEATFLDRLPEEMSCKAGGKSSIEVANHVQKVLGDVLGFECTGLT RKDKYLLLGGNDGKVESMYSGKKQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 500 | 500 | 4.7E-296 | – | |
| Phobius | 1 | 43 | 43 | - | – | |
| PANTHER | 1 | 500 | 500 | 4.7E-296 | – | |
| Pfam | 28 | 207 | 180 | 1.1E-14 | – | |
| TMHMM | 41 | 63 | 23 | - | – | |
| Phobius | 44 | 63 | 20 | - | – | |
| Phobius | 64 | 68 | 5 | - | – | |
| TMHMM | 68 | 90 | 23 | - | – | |
| Phobius | 69 | 92 | 24 | - | – | |
| Phobius | 93 | 249 | 157 | - | – | |
| Gene3D | 104 | 233 | 130 | 2.7E-8 | ||
| SUPERFAMILY | 225 | 493 | 269 | 4.32E-27 | – | |
| TMHMM | 248 | 270 | 23 | - | – | |
| Phobius | 250 | 270 | 21 | - | – | |
| Phobius | 271 | 504 | 234 | - | – | |
| CDD | 283 | 441 | 159 | 2.20575E-18 | – | |
| Pfam | 306 | 396 | 91 | 3.0E-6 | ||
| SMART | 307 | 408 | 102 | 3.1E-14 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Transferase activity, transferring acyl groups | Catalysis of the transfer of an acyl group from one compound (donor) to another (acceptor). |
Expression pattern of LotjaGi3g1v0384200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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