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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0386100 |
| Transcript ID | LotjaGi3g1v0386100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Beta-1,3-N-acetylglucosaminyltransferase lunatic fringe; TAIR: AT5G41460.1 transferring glycosyl group transferase (DUF604); Swiss-Prot: sp|Q8JHF2|LFNG_DANRE Beta-1,3-N-acetylglucosaminyltransferase lunatic fringe; TrEMBL-Plants: tr|A0A0B2R507|A0A0B2R507_GLYSO Uncharacterized protein; Found in the gene: LotjaGi3g1v0386100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:78185839..78192487) extracted from Lotus japonicus Gifu genome v1.2.
CAAATATATTAAGAATATAATTAAATTAATTAGTCAAAACATAATCAATAAAATATGAATTTGTTCAAGGGTATTAGTAA GTGTCTAAGTAACTTCCCTTTCCTAGTGCAAAAAATATTTTCTCATCAATATATTGGGAAGAAAACTAAAAAAATACATG CATCTTCTATTTCACCTCCTCCTTCATTTTCAACTCTCTCCCAAATATCTTAAAATCCATTTTCAACTAATTTTCCCTTC TCACTAACCTCCATCCTCACAGTGTAAAGCCTTAAACTATAACTCCACCTCCTATTCAATTTCATTTTTGTTCCATTTCT TTTTTGCTTTTTCACAAACCTTATCAATCACATTTTTCACTTCCATTTGTTTTCTTACAATCTGCAATTGCATTCCGCAG GGTTGCCTTTACCACTTGTGGAGGTGGAGGAGGAAGGAGCACACAAGAGGTTGAAAACTTCAAAGATTTTCTGATTCTTC CATCTTTCCCTGCAGAAAAAAACCCAAGATTCTGAACCAATTGAACCACACCATGAACAACAATCCCAAAGACCCAGATC AATTTTACTCTTCACGAAGCTTCTCAAAGCTAATGGTGTTCCTCCTCCTCTTAATCTCCATCCCCTACCTCTTCTACTCC CTGCGATTCATCACCCATTCCAATCACTGTGATCAAAACCCCAACATTCCCACCATCCACACCACTTCACTCTCTGAAAA ACAACCCCAAATCCCAACCCCAAAACCGTTTGAACAAACCAACATTTCTCACATAGTCTTCGGAATCGGAGCCTCATCAA ATCTATGGAAGCAGAGGAAAGAGTACGTCAAGCTCTGGTGGAAACCCAATCAAATGCGCGGCGTCGTGTGGCTGGAGCAG AACGTAACAAAACCCGATCCCGGCGACGAGAATCTCTTGCCGGAGCTGAGAATCTCCGGCAACACAACGAATTTCAAATA CTCCTACCCGAAGGGTAGCAGGTCCGCAATCAGAATCTCGCGGATCGTTTCGGAAACAGTGAGACTTCGATTGAAAGATG TGAGGTGGTTTGTGATGGGGGACGATGACACGTTCTTCGTGACGGAGAATTTGGTTAGGGTTTTGCAGAAGTATGATCAC AATCAATTCTATTACATTGGGAGTTCTTCAGAGACGCATTTGCAGAACATTTATCATTCTTACAATATGGCTTATGGCGG TGGTGGATTTGCGATTAGCTATGGTTTGGCGGTGGCGTTGGAGAAGATGCAGGATCGGTGTATTCAGAGGTATGCTGGAT TGTATGGCTCTGATGATCGGATTCATGCTTGCATGGCGGAGCTTGGGGTTCCACTCACCGTCGAGAAAGGGTTTCATCAG GTTAGTGCCTATTCTCTGGAATTTTCTATCTGTTTTGTGAGAATGATTGTGTTTGGTTACTGAGAAAATGGTAGGAAAAG GGGGGAAAGGGTAAAAATAGTCAATAGTCAAATGCATTTGACCCAAAAAAATGAAAATAAAAATAAAAACCAGTTTTGAA AGACATAGAAATTAGCTGAGTCTGTGACTTTACATATTGACTTGGTATTTTAATTTTTTTTTTATAGTAACTTGGTATTT TAATTATTTTTTATGGTAACTTGGTATTTTAATTGGCAATTCGAACAATTGGACATGGTGGAAAAAATTCCAATTTCATA GATGATATTTTTTCAGAAGCACAAGAAAAAAATTTCTAGATGAAAAAAAAACATTTCTTACTCTAAATAATTAGTGTACA TTCAATGGATTATTTACCCATGGTATTCTTTTTATTTTATTTCACATTGTCAGTGCAATTCGCTTTCTCATCATTGACCC TACCGAAATAAAATAATTTTAAAGCAGTTTTATATATTCCTCCTCGAATAAACTTTCCCTGGATAATCTCTGTGTTGAGG TGGAGAAACTTGAGGGATTGTTGTTAATTTATTGTTGATATAATAATATAAAATTTACCACCTGGCTGTTGATGATGCTA ACCCAAAACGAAAGAAGACATATTAGATGCAAAAACAGAAAATGACACCATTGGTACTGGCTAGAAGGTAGATGAGTCTA CACTCTACACACATTTTTCTCTCACATGCCCAAACAAGCTTTCAAAACCATTAATTTTTTGGTACATATTATTTCTTTAT TGCTAGTTACTGAATGTAGGCCAAAAGTCCAAAACTAACATAAAAGTGGGGCAAATTTGTTTAAATCGTTTCATTACAAA CTGATTACCCATAATGAGAAGTAGTCAAGGGGCTGTCTCCACCAAATGATTATTTCAAAGCTTACCCATCCAGAAACAAA CCTTGTCCTTTTCTCATTTACATTTTTTTTATCAATAGATTATTATAAAGGAAGTATCATTTTGCGAGGACTATGTAATG TAATCGTGTAAAGCATAGACGTGTCACTCTATGCTAATTTTGCTGTACCCGTGTACCGTGAGAAAATGACCCCATTCACT GTAAGGCATAAGGTGACATAAAATAAGCTGAATTGAATATTAAAACCTGCTCACACACTAAAAAGCACGTCACATTCAAC CAAAGCCACATTCATCTCCATGATTGGTTCTCTCTTCTCCACTGTCCTAAATTAGGATCCTCTGTCCCTTTCCTACTTCA CTTACAATTAGAGCTGTCAATACGGGCCAGTCCGGCCCATATGGGTCAGCCGTATGAGTTGGGTTGAAAACGGGTTGGGT TGTGTCAACCTGGGGTCTTAACGAACCAGGGAAATATGAACCCAACCCGGCTCGCTACGAGCTCGCGGGTTGGCGGGCTG ACTCGCGGGTTGAGTGAAATGAATATAAAAAATTGCGAAATTGGATTAGAAATTGTTTAAAATGTTATAAAAAATAATTT CAAAAAAATACTTATAGAAATTGGTATCAACACATAAAAAAAAGGTTTATCAACGCAATTATTTTTATCTCACATTTGAA ATATAGAAAAAGAATTTAGTTTACAGGATTTAAGAACACAATTATTTTACTGTCACATTTAAAATGAGATAAATAATATA ATAACAATAAATAAAACATAAAAAATTGACTCAAATTAAAAGAAATTAAAATTTTCATTTTTCTATCTAAAATTAATCCA TAAAACTAACCTGGAATTAAAGAGAAATAAAATAATTTTTTTAATGAAAAATTACTCTGACCCGACGGGTTGGCTCGCTT GACCCGCGGGTTGGCCCGTCTAACCCGCGAGTTAAACGAGCCGGGTTGCACTAACCCAAGCTCTTTTCGAGCTGGAATTT AACCAACCCAACCCGGCTCATTTAGCCAACCCGTCGAGCTGGCTCGCGGGTTGAAACCCATATTGACAGCTCTACTTACA ATGTTATAGCTTATAAAAAAAAAAACTTACAATGTTATTAATTATTGTATACTTTGATTAATATTTTTTGTCTCAATACT TTGATTAATACCATGTCATCAAATAACATGTTTGGATACTCAATTTGTGTGCCGATTACTGTGGTTAAAAGTGGATGTTT GGACTAATGAGTTAAAAGTTTCATTTTTAAGAGGTGCCTACTCTTGGAGAGACATTTAACATTTATCACACACTTATATC GAATATAATTACCTCAATAAACGACACGTACGGTTAAACAAAAAAAAAATGATTGGATGAGCTTCTTTGTTTTTTCACAT AAGCTTCCTATCAGAATTATACAAGAATTTTCAAACATGCACTTTATTTATGATCATTTGATTTTTTTTTTTCAATATGC ATTTGATTATATATGCACATATTTTTGAATGGAACTGGAACAGTGTGATGTGTACGGCAATCTCTTTGGGCTTTTAACAG CCCATCCCGTCACACCATTAATATCCCTCCATCACCTTGACGTAGTAGAGCCCATATTCCCAAACGTGACCCAGGCCCAA GCCCTAAAGCGGCTCACGCAGCCCATGGATCTCGACTCCGCCGGGCTCATGCAGCAATCCATATGCTACGACGAGGCCCG CAAATGGACGGTGTCGGTGTCGTGGGGCTACGCCGTTCAAATCTTCCGCGGCATCTTCTCCGCTCGGGAAATGGAGATGC CGGCGAGGACCTTCCAGAACTGGTACCGGCGCGCCGATAGCACCTCCTTCACCTTCAACACGCGCCCTATCACCAGAAAC AGTTGTCAGATACCGTTTGTTTACTACTTCTCTTACGCGGTTTACAACGAGGACACTCACCAGACCGCAACTCGGTACGT TCGGGTTGAATCGAACCCGGAGTGCAAGTGGAGGATGGAGGATCCGACGCAGATTGAAGTGGTGGAGGTTTACAAGAAGC CAAACCCTAATTTGTGGGACAAGGTAACTTCAAATTTCACTGTGATTTTGAAATTAAGTAGATTTGGGAACTGAAACCCT AGTTTGGTTAGTGGTTACTGAAATTGATTTTGGTTTTGATGTTTTGTGCAGTCTCCGAGGAGAAATTGTTGCAGGGTGAA GCCGACGAAGAAGAAAGGAACTATGGTGATTGATGTGGGGGAATGCAGGGAAGGTGAAGTTGTTGAATTGTAGTTAGAGC TTCAAACAGGCATGTTCATACATATTTCTGGCGGCTAGTGTCGACAAAGATGAGTTTACAAGTCTAGATTTTAGTTTCTC CTCAGAACATGTGTAGTTTTTTTTTTTTTTTGAAGAGGGGTAAGGGTAAAGTCATGATGGAATGCCACAATTTTCACCAA GACCTTATAGTATTATACAAGTATAAATTCAAGGATAAACTTGTTTTGTTTTGATTTTGATTTTCTATAAATTTCATGAA ATCCAATTACTAAACTCAAAATGATTGCTATGCCTATATTAGATAGTTCTAATGTTTTCTATTGAACTCATTGCTAAAGG GCTTGGATCCAGGGTTGCATACTTGAGGAGTTCAGTGTTTGCTATCAAAGTAGTCATGTCCTGCTCAACCAACGTAACCC AAGCTTCTATGCCATCTCGCAGCCTGGTATCAACCAGCATAATAAGATTCATATACACTGAACCTGTTGCAGCAACACAA GTCACCCATGTGGGTTTTCCCCACCCGAAATCAGCCTCATAGAACTCAAAATTGCACCAGCTGCTGAACGCAAAATACTC TACTTCATTCTTGGATCCTGTCTCACCTATTCCTCTTAGAGAATCTTGCATAATGGACCTTCCGTTATCGCCTTGCAATT CCTTAACAAATTTATCATCGACTTTTGATATTGCATTCCTCAACTTAGCCACCAACCCTTCCAAATCCGTCTCATGATCA CTCATGTGCTCCGCAGCCACGGGCCAAAGAAGGTTTCCCATGGCATGCTGTGGAGAAAGAGCTTCATCTATTCTCCTGCG CAGGTTCACCAAGTGGGTCACCAAGGAAGGTCTCTTTGCCATGAGAAACTTCCACAAGATTGTAGAAACTATCTCTACAC GTGTAGGGTGTTGTATTGCCGAATCTGATATTTGAGCCTTGAGGAGGGCAATATCTGAGTTTCTGAACAGAAACCTTTTG GTGACCCACTTGCCTTGCTTGAATAAAGAAGCCCATGTACTCATTGCTAAGTCTCTAAGCCATAAACTTTTTGTAGGGAA GAGAGAATATCCTATGAAATTGGGTTGGGGTAATTGGTTGCAATTGCAACCCCTAGCCCTGCATGACCACTCTTTCAGGA AGGTGCTCATGGCAGCCCCATCAACAATCCTGTGAGAAATGCACATGCCTATAGCAATTCCCCCACATTCAAAGAAGTTA ACTTGAATGTGAGTCACATAGTTTTCTGAATTTGATTCTTGAGAAAAAAGTTCAATAGGAAGAAACTTGTGCAGCAAGTT CAGCTGAGGCTGGCCTAGAAATATAGAAAGTGGACAGTTCACTTTGGCTTCCACAAAATTAGCCCCGTTATCATTACACT CAATGGTCAGGTCATCTTTGATCCTGCCACCCAGTGGGTAGAACTTGGTTAGTGTCTCAGATAAAGATTGCTTCAGCAAT TGTAACTTGTTGGAGCCTTGAGAAAGGCTACTTGAGTCATAGAATAGGATTATGGGAGCATATGGGGATGAAATAAGATG ATCCAAAAGGGAAAGTTTGAAGTCCCTGAGGTGAGAGGGCGTGGGAGAAGAAGGCCTAATGTCTTCTCTAGAAACGATTT CAACTTTCATGATTTGGCTCAGTAAAAAAGCTTGATAGGTGTATCCATCAAGGGGCTACATATGCAACATTTAATTGTCT TTGATGGGGAACCTGACTTTCCCATCACAAGAAGAATATTCTTGAGTAATAGGCGGTTGCTCCTTTTGTTGTCGTATACT GAAGAAGTTTGTTCCCCTTACCATATGCCTTACTGTTTTCATCCGAATCAGAAATGTCAAACCTTTTGTTGTCATATACT GAAGAAGTTTGTTCCCCTCACCATATGCCTTACTGTTTTCATCCAAATCCAAATCAGAAATGTTAAACCTGTCAATTTTA AATGATACATGATTACTACATAGAGCATATTAAGCCGAATGGTAAGTTCCTTGCATGCTTTTTTGTGTGATTCAAAAATC AACCGACTAGATTTGAAAATTTTCTCACGGATTAATATGACAATATGAAGAAATCTGATAATATCTTTGTGAGGAAATTA ATCATATCT
CDS sequence (LotjaGi3g1v0386100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAACAACAATCCCAAAGACCCAGATCAATTTTACTCTTCACGAAGCTTCTCAAAGCTAATGGTGTTCCTCCTCCTCTT AATCTCCATCCCCTACCTCTTCTACTCCCTGCGATTCATCACCCATTCCAATCACTGTGATCAAAACCCCAACATTCCCA CCATCCACACCACTTCACTCTCTGAAAAACAACCCCAAATCCCAACCCCAAAACCGTTTGAACAAACCAACATTTCTCAC ATAGTCTTCGGAATCGGAGCCTCATCAAATCTATGGAAGCAGAGGAAAGAGTACGTCAAGCTCTGGTGGAAACCCAATCA AATGCGCGGCGTCGTGTGGCTGGAGCAGAACGTAACAAAACCCGATCCCGGCGACGAGAATCTCTTGCCGGAGCTGAGAA TCTCCGGCAACACAACGAATTTCAAATACTCCTACCCGAAGGGTAGCAGGTCCGCAATCAGAATCTCGCGGATCGTTTCG GAAACAGTGAGACTTCGATTGAAAGATGTGAGGTGGTTTGTGATGGGGGACGATGACACGTTCTTCGTGACGGAGAATTT GGTTAGGGTTTTGCAGAAGTATGATCACAATCAATTCTATTACATTGGGAGTTCTTCAGAGACGCATTTGCAGAACATTT ATCATTCTTACAATATGGCTTATGGCGGTGGTGGATTTGCGATTAGCTATGGTTTGGCGGTGGCGTTGGAGAAGATGCAG GATCGGTGTATTCAGAGGTATGCTGGATTGTATGGCTCTGATGATCGGATTCATGCTTGCATGGCGGAGCTTGGGGTTCC ACTCACCGTCGAGAAAGGGTTTCATCAGTGTGATGTGTACGGCAATCTCTTTGGGCTTTTAACAGCCCATCCCGTCACAC CATTAATATCCCTCCATCACCTTGACGTAGTAGAGCCCATATTCCCAAACGTGACCCAGGCCCAAGCCCTAAAGCGGCTC ACGCAGCCCATGGATCTCGACTCCGCCGGGCTCATGCAGCAATCCATATGCTACGACGAGGCCCGCAAATGGACGGTGTC GGTGTCGTGGGGCTACGCCGTTCAAATCTTCCGCGGCATCTTCTCCGCTCGGGAAATGGAGATGCCGGCGAGGACCTTCC AGAACTGGTACCGGCGCGCCGATAGCACCTCCTTCACCTTCAACACGCGCCCTATCACCAGAAACAGTTGTCAGATACCG TTTGTTTACTACTTCTCTTACGCGGTTTACAACGAGGACACTCACCAGACCGCAACTCGGTACGTTCGGGTTGAATCGAA CCCGGAGTGCAAGTGGAGGATGGAGGATCCGACGCAGATTGAAGTGGTGGAGGTTTACAAGAAGCCAAACCCTAATTTGT GGGACAAGTCTCCGAGGAGAAATTGTTGCAGGGTGAAGCCGACGAAGAAGAAAGGAACTATGGTGATTGATGTGGGGGAA TGCAGGGAAGGTGAAGTTGTTGAATTGTAG
Protein sequence (LotjaGi3g1v0386100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNNNPKDPDQFYSSRSFSKLMVFLLLLISIPYLFYSLRFITHSNHCDQNPNIPTIHTTSLSEKQPQIPTPKPFEQTNISH IVFGIGASSNLWKQRKEYVKLWWKPNQMRGVVWLEQNVTKPDPGDENLLPELRISGNTTNFKYSYPKGSRSAIRISRIVS ETVRLRLKDVRWFVMGDDDTFFVTENLVRVLQKYDHNQFYYIGSSSETHLQNIYHSYNMAYGGGGFAISYGLAVALEKMQ DRCIQRYAGLYGSDDRIHACMAELGVPLTVEKGFHQCDVYGNLFGLLTAHPVTPLISLHHLDVVEPIFPNVTQAQALKRL TQPMDLDSAGLMQQSICYDEARKWTVSVSWGYAVQIFRGIFSAREMEMPARTFQNWYRRADSTSFTFNTRPITRNSCQIP FVYYFSYAVYNEDTHQTATRYVRVESNPECKWRMEDPTQIEVVEVYKKPNPNLWDKSPRRNCCRVKPTKKKGTMVIDVGE CREGEVVEL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 19 | 19 | - | – | |
| PANTHER | 15 | 488 | 474 | 3.4E-260 | – | |
| PANTHER | 15 | 488 | 474 | 3.4E-260 | – | |
| TMHMM | 20 | 42 | 23 | - | – | |
| Phobius | 20 | 40 | 21 | - | – | |
| Phobius | 41 | 489 | 449 | - | – | |
| Gene3D | 68 | 283 | 216 | 2.2E-14 | – | |
| Pfam | 211 | 463 | 253 | 1.0E-114 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0386100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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