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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0404100 |
| Transcript ID | LotjaGi3g1v0404100.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Metal tolerance protein; TAIR: AT3G58810.1 metal tolerance protein A2; Swiss-Prot: sp|Q688R1|MTP1_ORYSJ Metal tolerance protein 1; TrEMBL-Plants: tr|I3SFM8|I3SFM8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0404100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:80676304..80681510) extracted from Lotus japonicus Gifu genome v1.2.
CACGGAAGAACATTCTAAATATTCCATCTAAAGCAATTCTGATATCTCCTCTTTTTATGCCCGTTTGGTGGACAAGACAG AGTTATGAAAAATTATTCTAAGAGAATATGATACGGTTTAGGTTTATGAATATTATGAATCTTCTTTTTTATATATTCCA TCTAAAAGCAATTCTGATATCTTCTTTTTTTTTAGTTTGAACAAATTATTTTTCGGGTTTTGGTTAACGATATCTGTTTT GCTTTCTTCAAATCCCTAACCCCTTAACTTAACAGCAACCCCGAAATCAAAACCAGCCACAACCAGAACCAGAAGAAGAA GAAGAAGCAGAAGAAGCGTTCAGAATCGATTCCCATTGTTGCCGCCGTAAAAGTAAGCTTCTATTTTATCATAAAACCCC TTTTCACTTTCTGCTTTTTCCTTATCTCCTTTATGCCAAAAAACTATATATATATATATATATATATAAATATTTTGCAC TGAATTGGGTTTTTTCTAGATTTGATCATCGATGACGAACCCCAATTTCTCTATTAATCAATTTTTTTTCCCTTTTTGGT TTTGTCTGAATGTTTTTGATTTGAGGTTCTGCTGACTCTGTTTTTTGTGGCAGTTAGTGTGACTGTTTCTTCAGCTTCTT GTTGTTTTGCTTTTGCAACTTATTGTGTTTCTGTTTGGTGGGAATCTAACTTGATGTGAAATGCATGAGATTTATAGCTG TCTCTTCAATTCAATAATTTGCATCATCATTTATCTATATTTATAGTTGCATTGGGTGCTTCCATGTAGTGTTGTAGTAA TCTTGTTTGGTTGCTTTATTCAATTCCTAAAGGGTAGGTTTACTGTGCTGAATTGATTAATGACATCCACTGCCTGTTGC TACTGCTCTCTTCTACCTTGATACCTATTCAATTCCTAAAGGGTAGGTTCACTGTGCATTGGGGGGGTTCTATGTAGTGT TGTAGCAATGTTTTTGATCTGTTTTCTTTTGTGCTTCTAGGATTCTAGCAATTCAGCTTGTTACTTATCTTCTCCTGTTA ATATATCTATATCTTGTAAAAGGGTGCCAAATTTTCTTGATCTATTTGCTTTTGGGTTGGTCATCCTCTATTTGCTCTGC TGTGCTTGGCATTGGTTTATGTTATATGTTAACTTGAGCTGATTGTTTGATCTGTTTTTGTGGCCATTGCCCTTGTGAAT AGCTAGAACTGGTCTTTATAACTCATTCATAAGTTTGCGAAGTGAATCTGAACTTTCTCCCTTTTGAATTTCTGCATTTT GGTGTGGTTTGCACTTTAGTTGCATGTTCTAAGTTATTTACTTTTTTTTGTGTTTTACTTAATTATTTATTTTGTAAAGG AATGCTTCTGACCTGGGTTTGAGATCTCTCTTACCAGTTGATCATGTTAGTTCGTGCAATTCTGTTAGTCATAGTGAGAT TATCATGCTTGAATCATGAAAATTTGGTGGAACTCTTTTTATAAAGGTTCATGTTATCTTGTGTAAACTAGTTCATCAGT CATATTCAGAATCTATGGGTTGTAACATCATAAAGCTGTTACTTTAATAAGTTGTCAAAGTGGGATTGCAATTGCAACCA GAGACTTTCCCAACACTTCCTGATTTAATGGATTATTAGTCACAACATGTTCATACCTGTTCCTAAAGTTTCTTTCTCAA GTAAACATTTCATTTATGTCTTATTTTTCCAAAGTCACACTTATTTGCTCACCTCCAGTGAAGAAGGATATTTTCTAACT TGAACTGTGGTTTTGATGTTTACTTCCCAATTCCTATAGTTGAGCCGAGCATAGAGATCGAGTATATATTAAATCCACAA AACATATATCCTTAGTTTTTCTTTTCATTATCCAAAGGTTTGGAATTTTCGTATCTGTAGAATGCAATGATGTCTTTCTG TGTCTTGTTTATGTTGCCTTTCTCTGTCTTGTCTATAATGTTTTCCTGGATAGGTAGTAGTTGCATGATTTTTTAGTGTA AGCACTTTGCATCCTCATTATTTTGTATTAATCTATTATCCAAAGGTTTGGAATTTTCTTTGTTGATTGCTGAGTTCGTT AAATCATATCTGAAACCTCACTTTTTTTTTTAAATTTGTTATGAGTGATCTGTTATGTCTATCTAATGATGAAAAGTTAA GTCATTTATTAATTGCGTGAACTTTAAGAAAGCGTAAATTTTGTTGAACATTCATCCATTTTATTTGTGTTATTTGATCT AGAGATCTGTGTTAGACTGTTAACTCTATGTTCTATAAAATCAGCATGACTATAAGTGGCCTTTGATGTATAATTGGATC ATGGTTAAAACAGCTGTTCATAGTGGTTTCATGATCAGTTTTACTTTTTTTCTTGCCACTTTTCTATTAATTACTCATTC AACTTCTTTTGGGATAAAATTGTCCCACAATACTGAAGTTACTGATGGCTGATATGATATTTCTTGTTTCTATTTAATGC TTAGAAGAATGTTTGCCTCTGTTGTCTGGTTTTTCTCCACTTCAATTAACATTGCATTTTCATTACCATATTGCAGATGG AAGCACAAAGTTCTCAGCATGGGCAAGTTATCGAAATTGGTGGAGATCTTTGTGAAGAAAGGAAGATTTGTGGGGAAGCG CCATGTGGCTTCGCAGATGCTGGTGCCATCTCCAAGGATTCTGAAGAACGGTCAACTGCCATGCGAAAGCTTTTGATGGC AGTAATCCTTTGTGTTATTTTCATGACCGTTGAAGTAGTTGGTGGCATCAAAGCTAACAGTCTTGCAATATTGACTGATG CTGCACATTTGCTTTCAGATGTTGCAGCATTTGCCATCTCCTTATTTTCTTTATGGGCTGCAGGATGGGAAGCTAATCCC CGTCAGTCATATGGATTTTTCAGAATAGAGATTCTTGGTGCTCTGGTTTCTATCCAATTAATATGGCTGCTTGCTGGGAT TCTGGTATATGAAGCCATTGACAGAATGATTGCAGGTCCTAAAGACGTTGATGGTTTTTTGATGTTCATGGTTGCTGCAT TTGGTCTTGTGGTTAACATCCTTATGGCTTTTTTATTGGGTCATGATCATGGACATGGTCATGGACATGGACATGATCAT GGACATGATCATCATGGCCACAGCCACGGACATGATCATCATCATAGCCACAGCCATGGGGTTTCAGTGACTAGCCATAC AAAAGTTGAGCACCATCACACCCATGATGAAAAGGATCCAGAGGATGCACACCATCATACCCATGAGGATCACAAGCACC ATGATGCCCACAAAGAGGTTACTGAACCACTTCTTGGTGAATCAAAAGACAGGCCCAAGAAGAAGAGGAACATTAATGTG CAGGGGGCTTATCTCCATGTACTTGGAGACTCTATCCAGAGTATTGGGGTAATGATTGGAGGAGCAGTCATATGGTATAA GCCTGAGTGGCAAATAGTTGATCTAATCTGCACTCTGATTTTTTCAGTAATTGTTTTGGGGACTACTATCAACATGCTTC GAAACATTCTGGAAGTCCTGATGGAAAGCACGCCCCGTGAGATAGATGCCACTGAGCTTGAAAGAGGGGTGTTGGAGATG GAAGAAGTATTGGCTGTTCATGAGCTGCACATATGGGCCATTACAGTGGGGAAGGTTCTGCTCGCCTGTCATGTTAAAAT CAAACGTGATGCTGATGCAGATATGGTGCTGGACAAGGTTGTTGACTACATCAAAAGGGTTTATAACATCAGCCATGTAA CCATCCAGATAGAGCGCTAAGTTTTCCTTTCATGTTCTTTGTGTACATCTTTTATGCTAGTGAATGATTATGATGGGAAG AATTTAGTTAGACTTAAGGCATTATGTTTCTGGAACTCAACTTTCTCCAAGACAATAATTGTTTTTTTATATGCACCTGG TTGCTAGCAGTGCAATAGTGTGTATTTTTAATTTTTTTCCCAAGATATCCCACAAACGGCAGTCATGAGACTAATTCCTT GAGGCTTTGAGATCACGTTAAGTTAGTAGGTCTCTCCCAACAAATCCTTCTCTATATGCACCTTTGAATTAGATACTTAA GGAGTCTAGTTATCTACCTTCTTAGTGCAATAGTGTGTATATGAGCATTAAGTGTTTGCAGTATTTGTCAATACCACCTA GTTGAACAACTGCCGCCATGTTTTAGGGTGTGTTGTTGACAAATTCTGCGTTTCACAGGCATGTGAGATTGTAAAGGTTC TCTTAGTTGTGTGTTTTGCTGATATTGTCAATTGTCTACTTAAGTCATTCTGGCGAATCACCTCAAGTTTGCATTGTTAT AACCTGCCCATTGTCTCATTGAGCAGCCACTCTGTCAACACTCAACAGTGAGGGTTTTGATCTACCTTAAAAATCCACAT CTCACTTTAAAAAACAAAACATAAAGAAAAACTGCCCATATTCTCCGTTTCTGATGTGTACTTGGTGAATAACAAAAATA TTTTGTAGTCAATTAGTTGTGATAATTTACTGGTATTGATGGGTGGAAGTTCAGTTCAAAGAGTGCTCTTTTTTGTTTGT TAAATTGTAGATAGTGGCAGTAAGTTAGTTTTAAGATTGAGTTCCTCCTTTCTTATTTTCTAACTAAACATAATTCTAGG ACTAATTTAGTGTGTATGGTTTTTTATCTTTCTAAAATAACTTTCTTCTATCTTTCTAAAATAGCATTATGTCTTTATTA GAAAGATAGCGATAGAAGAAAGTAATGAGATTTATTAGAGGTAATCATTATCATGGAAGATTTTCTATTGGTGGTGTTAC TTGAATGCATGAATTAAACCTGTTTATAAATGCTAGGGACAGGTCATCAGTTTTGTAGGGTTCTAGAGTGAGAGAACTCT TTTGATTCTAGCTAAAGGGGTGCAATTATTATATGAGACAATGCATGATTGTTACAAATTCGAATGATTTTGGCATTTTC AAGTTGGAGTTCCTTTTATTATTATTTTCTTTGTCAAAAGTAGCAGACATATGAAGTGGATGTACTGTGATCACGTAGTA CAGACAGGAAAATATCCCAAACTGTTGCTGCCCCGAGAGTAAAGGCATCTGCAGAGACAGAAACCAATTTTCCTTTCTAT GGCTATAATATAATTGCTATTGTAAAATTTTGTACAAATATTGAAAAAGTTATTAGGTATCTATACTTTTCAATACCATA ATTTAAC
CDS sequence (LotjaGi3g1v0404100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAGCACAAAGTTCTCAGCATGGGCAAGTTATCGAAATTGGTGGAGATCTTTGTGAAGAAAGGAAGATTTGTGGGGA AGCGCCATGTGGCTTCGCAGATGCTGGTGCCATCTCCAAGGATTCTGAAGAACGGTCAACTGCCATGCGAAAGCTTTTGA TGGCAGTAATCCTTTGTGTTATTTTCATGACCGTTGAAGTAGTTGGTGGCATCAAAGCTAACAGTCTTGCAATATTGACT GATGCTGCACATTTGCTTTCAGATGTTGCAGCATTTGCCATCTCCTTATTTTCTTTATGGGCTGCAGGATGGGAAGCTAA TCCCCGTCAGTCATATGGATTTTTCAGAATAGAGATTCTTGGTGCTCTGGTTTCTATCCAATTAATATGGCTGCTTGCTG GGATTCTGGTATATGAAGCCATTGACAGAATGATTGCAGGTCCTAAAGACGTTGATGGTTTTTTGATGTTCATGGTTGCT GCATTTGGTCTTGTGGTTAACATCCTTATGGCTTTTTTATTGGGTCATGATCATGGACATGGTCATGGACATGGACATGA TCATGGACATGATCATCATGGCCACAGCCACGGACATGATCATCATCATAGCCACAGCCATGGGGTTTCAGTGACTAGCC ATACAAAAGTTGAGCACCATCACACCCATGATGAAAAGGATCCAGAGGATGCACACCATCATACCCATGAGGATCACAAG CACCATGATGCCCACAAAGAGGTTACTGAACCACTTCTTGGTGAATCAAAAGACAGGCCCAAGAAGAAGAGGAACATTAA TGTGCAGGGGGCTTATCTCCATGTACTTGGAGACTCTATCCAGAGTATTGGGGTAATGATTGGAGGAGCAGTCATATGGT ATAAGCCTGAGTGGCAAATAGTTGATCTAATCTGCACTCTGATTTTTTCAGTAATTGTTTTGGGGACTACTATCAACATG CTTCGAAACATTCTGGAAGTCCTGATGGAAAGCACGCCCCGTGAGATAGATGCCACTGAGCTTGAAAGAGGGGTGTTGGA GATGGAAGAAGTATTGGCTGTTCATGAGCTGCACATATGGGCCATTACAGTGGGGAAGGTTCTGCTCGCCTGTCATGTTA AAATCAAACGTGATGCTGATGCAGATATGGTGCTGGACAAGGTTGTTGACTACATCAAAAGGGTTTATAACATCAGCCAT GTAACCATCCAGATAGAGCGCTAA
Protein sequence (LotjaGi3g1v0404100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEAQSSQHGQVIEIGGDLCEERKICGEAPCGFADAGAISKDSEERSTAMRKLLMAVILCVIFMTVEVVGGIKANSLAILT DAAHLLSDVAAFAISLFSLWAAGWEANPRQSYGFFRIEILGALVSIQLIWLLAGILVYEAIDRMIAGPKDVDGFLMFMVA AFGLVVNILMAFLLGHDHGHGHGHGHDHGHDHHGHSHGHDHHHSHSHGVSVTSHTKVEHHHTHDEKDPEDAHHHTHEDHK HHDAHKEVTEPLLGESKDRPKKKRNINVQGAYLHVLGDSIQSIGVMIGGAVIWYKPEWQIVDLICTLIFSVIVLGTTINM LRNILEVLMESTPREIDATELERGVLEMEEVLAVHELHIWAITVGKVLLACHVKIKRDADADMVLDKVVDYIKRVYNISH VTIQIER
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 51 | 51 | - | – | |
| PANTHER | 1 | 407 | 407 | 1.2E-210 | – | |
| PANTHER | 1 | 407 | 407 | 1.2E-210 | – | |
| SUPERFAMILY | 46 | 330 | 285 | 1.44E-49 | ||
| Gene3D | 48 | 182 | 135 | 8.2E-20 | ||
| TIGRFAM | 49 | 407 | 359 | 3.2E-95 | ||
| Pfam | 52 | 329 | 278 | 1.1E-46 | ||
| TMHMM | 52 | 71 | 20 | - | – | |
| Phobius | 52 | 71 | 20 | - | – | |
| Phobius | 72 | 82 | 11 | - | – | |
| TMHMM | 82 | 104 | 23 | - | – | |
| Phobius | 83 | 102 | 20 | - | – | |
| Phobius | 103 | 113 | 11 | - | – | |
| Phobius | 114 | 141 | 28 | - | – | |
| TMHMM | 116 | 138 | 23 | - | – | |
| Phobius | 142 | 152 | 11 | - | – | |
| Phobius | 153 | 174 | 22 | - | – | |
| TMHMM | 153 | 175 | 23 | - | – | |
| Phobius | 175 | 270 | 96 | - | – | |
| MobiDBLite | 180 | 263 | 84 | - | – | |
| MobiDBLite | 185 | 204 | 20 | - | – | |
| MobiDBLite | 212 | 263 | 52 | - | – | |
| Gene3D | 252 | 329 | 78 | 1.2E-6 | ||
| TMHMM | 271 | 293 | 23 | - | – | |
| Phobius | 271 | 294 | 24 | - | – | |
| Phobius | 295 | 299 | 5 | - | – | |
| Phobius | 300 | 321 | 22 | - | – | |
| TMHMM | 303 | 325 | 23 | - | – | |
| Phobius | 322 | 407 | 86 | - | – | |
| SUPERFAMILY | 335 | 406 | 72 | 1.27E-6 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Cation transport | The directed movement of cations, atoms or small molecules with a net positive charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Molecular function | Cation transmembrane transporter activity | Enables the transfer of cation from one side of a membrane to the other. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi3g1v0404100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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