Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR036837
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

Export options

Download the entire search result as a CSV file.

We have found 20 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.748s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi1g1v0104000.1
n.a. Metal tolerance protein; TAIR: AT3G58060.1 Cation efflux family protein; Swiss-Prot: sp|Q10PP8|MTP4_ORYSJ Metal tolerance protein 4; TrEMBL-Plants: tr|V7B8T4|V7B8T4_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0104000 LjG1.1_chr1 16074142 16078914 +
3 domain predictions
 –
LotjaGi1g1v0104000.2
n.a. Metal tolerance protein; TAIR: AT3G58060.1 Cation efflux family protein; Swiss-Prot: sp|Q10PP8|MTP4_ORYSJ Metal tolerance protein 4; TrEMBL-Plants: tr|A0A072UFJ3|A0A072UFJ3_MEDTR Mn-specific cation diffusion facilitator transporter MTP8.1; Found in the gene: LotjaGi1g1v0104000 LjG1.1_chr1 16075772 16078562 +
3 domain predictions
 –
LotjaGi1g1v0263800.1
n.a. Metal tolerance protein; TAIR: AT3G58060.1 Cation efflux family protein; Swiss-Prot: sp|Q10PP8|MTP4_ORYSJ Metal tolerance protein 4; TrEMBL-Plants: tr|G7IV59|G7IV59_MEDTR Mn-specific cation diffusion facilitator transporter MTP8.1; Found in the gene: LotjaGi1g1v0263800 LjG1.1_chr1 64610829 64614666 -
3 domain predictions
 –
LotjaGi1g1v0264300.1
n.a. Metal tolerance protein; TAIR: AT3G58060.1 Cation efflux family protein; Swiss-Prot: sp|Q10PP8|MTP4_ORYSJ Metal tolerance protein 4; TrEMBL-Plants: tr|A0A0B2QEZ2|A0A0B2QEZ2_GLYSO Metal tolerance protein 4; Found in the gene: LotjaGi1g1v0264300 LjG1.1_chr1 64693047 64696337 +
3 domain predictions
 –
LotjaGi1g1v0533400.1
n.a. Metal tolerance protein; TAIR: AT2G39450.1 Cation efflux family protein; Swiss-Prot: sp|Q5NA18|MTP5_ORYSJ Metal tolerance protein 5; TrEMBL-Plants: tr|I1N523|I1N523_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0533400 LjG1.1_chr1 106174965 106179515 +
3 domain predictions
 –
LotjaGi1g1v0533400.2
n.a. Metal tolerance protein; TAIR: AT2G39450.1 Cation efflux family protein; Swiss-Prot: sp|Q5NA18|MTP5_ORYSJ Metal tolerance protein 5; TrEMBL-Plants: tr|G7KVP0|G7KVP0_MEDTR Cation diffusion facilitator family transporter; Found in the gene: LotjaGi1g1v0533400 LjG1.1_chr1 106175873 106179352 +
3 domain predictions
 –
LotjaGi1g1v0533400.3
n.a. Metal tolerance protein; TAIR: AT2G39450.1 Cation efflux family protein; Swiss-Prot: sp|Q5NA18|MTP5_ORYSJ Metal tolerance protein 5; TrEMBL-Plants: tr|G7KVN9|G7KVN9_MEDTR Cation diffusion facilitator family transporter; Found in the gene: LotjaGi1g1v0533400 LjG1.1_chr1 106176355 106179055 +
3 domain predictions
 –
LotjaGi1g1v0533400.4
n.a. Metal tolerance protein; TAIR: AT2G39450.1 Cation efflux family protein; Swiss-Prot: sp|Q5NA18|MTP5_ORYSJ Metal tolerance protein 5; TrEMBL-Plants: tr|G7KVN9|G7KVN9_MEDTR Cation diffusion facilitator family transporter; Found in the gene: LotjaGi1g1v0533400 LjG1.1_chr1 106176381 106179055 +
3 domain predictions
 –
LotjaGi1g1v0533400.5
n.a. Metal tolerance protein; TAIR: AT2G39450.1 Cation efflux family protein; Swiss-Prot: sp|Q5NA18|MTP5_ORYSJ Metal tolerance protein 5; TrEMBL-Plants: tr|G7KVN9|G7KVN9_MEDTR Cation diffusion facilitator family transporter; Found in the gene: LotjaGi1g1v0533400 LjG1.1_chr1 106176616 106179055 +
3 domain predictions
 –
LotjaGi1g1v0797000.1
n.a. Metal tolerance protein; TAIR: AT2G46800.1 zinc transporter; Swiss-Prot: sp|Q9ZT63|MTP1_ARATH Metal tolerance protein 1; TrEMBL-Plants: tr|I1KHN9|I1KHN9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0797000 LjG1.1_chr1 136749315 136752279 +
2 domain predictions
 –
LotjaGi3g1v0133500.1
n.a. Cation efflux family protein; TAIR: AT1G16310.1 Cation efflux family protein; Swiss-Prot: sp|Q0WU02|MTP10_ARATH Metal tolerance protein 10; TrEMBL-Plants: tr|I1KTX5|I1KTX5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0133500 LjG1.1_chr3 16917879 16921751 -
3 domain predictions
 –
LotjaGi3g1v0404100.1
n.a. Metal tolerance protein; TAIR: AT3G58810.1 metal tolerance protein A2; Swiss-Prot: sp|Q688R1|MTP1_ORYSJ Metal tolerance protein 1; TrEMBL-Plants: tr|I3SFM8|I3SFM8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0404100 LjG1.1_chr3 80676304 80681510 +
2 domain predictions
 –
LotjaGi3g1v0404100.2
n.a. Metal tolerance protein; TAIR: AT3G58810.1 metal tolerance protein A2; Swiss-Prot: sp|Q688R1|MTP1_ORYSJ Metal tolerance protein 1; TrEMBL-Plants: tr|I3SFM8|I3SFM8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0404100 LjG1.1_chr3 80677025 80680586 +
2 domain predictions
 –
LotjaGi3g1v0404100.3
n.a. Metal tolerance protein; TAIR: AT3G58810.1 metal tolerance protein A2; Swiss-Prot: sp|Q688R1|MTP1_ORYSJ Metal tolerance protein 1; TrEMBL-Plants: tr|I3SFM8|I3SFM8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0404100 LjG1.1_chr3 80678851 80680083 +
2 domain predictions
 –
LotjaGi3g1v0491200.1
n.a. Metal tolerance protein; TAIR: AT3G58810.1 metal tolerance protein A2; Swiss-Prot: sp|Q9LXS1|MTPA2_ARATH Metal tolerance protein A2; TrEMBL-Plants: tr|I1LJX9|I1LJX9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0491200 LjG1.1_chr3 90909500 90914079 +
2 domain predictions
 –
LotjaGi5g1v0252500.1
n.a. Cation-efflux pump FieF; TAIR: AT2G47830.1 Cation efflux family protein; Swiss-Prot: sp|Q8L725|MTPC1_ARATH Metal tolerance protein C1; TrEMBL-Plants: tr|A0A072VN24|A0A072VN24_MEDTR Metal tolerance-like protein; Found in the gene: LotjaGi5g1v0252500 LjG1.1_chr5 56127842 56134490 -
3 domain predictions
 –
LotjaGi6g1v0045600.1
n.a. Metal tolerance protein; TAIR: AT3G58060.1 Cation efflux family protein; Swiss-Prot: sp|Q10PP8|MTP4_ORYSJ Metal tolerance protein 4; TrEMBL-Plants: tr|A0A0B2QEZ2|A0A0B2QEZ2_GLYSO Metal tolerance protein 4; Found in the gene: LotjaGi6g1v0045600 LjG1.1_chr6 8492796 8501311 -
3 domain predictions
 –
LotjaGi6g1v0197000.1
n.a. Cation efflux family protein; TAIR: AT1G16310.1 Cation efflux family protein; Swiss-Prot: sp|Q0WU02|MTP10_ARATH Metal tolerance protein 10; TrEMBL-Plants: tr|A0A151T8G0|A0A151T8G0_CAJCA Putative metal tolerance protein C3; Found in the gene: LotjaGi6g1v0197000 LjG1.1_chr6 49393237 49395949 -
3 domain predictions
 –
LotjaGi6g1v0197000.2
n.a. Cation efflux family protein; TAIR: AT1G16310.1 Cation efflux family protein; Swiss-Prot: sp|Q0WU02|MTP10_ARATH Metal tolerance protein 10; TrEMBL-Plants: tr|G7J6P9|G7J6P9_MEDTR Cation diffusion facilitator family transporter; Found in the gene: LotjaGi6g1v0197000 LjG1.1_chr6 49393872 49395280 -
3 domain predictions
 –
LotjaGi6g1v0197000.3
n.a. Metal tolerance protein; TAIR: AT1G16310.2 Cation efflux family protein; Swiss-Prot: sp|Q0WU02|MTP10_ARATH Metal tolerance protein 10; TrEMBL-Plants: tr|G7J6P9|G7J6P9_MEDTR Cation diffusion facilitator family transporter; Found in the gene: LotjaGi6g1v0197000 LjG1.1_chr6 49393872 49395951 -
3 domain predictions
 –