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LotjaGi3g1v0408000.1

Overview

Field Value
Gene ID LotjaGi3g1v0408000
Transcript ID LotjaGi3g1v0408000.1
Lotus japonicus genome version Gifu v1.2
Description Aminotransferase; TAIR: AT1G72330.1 alanine aminotransferase 2; Swiss-Prot: sp|Q9LDV4|ALAT2_ARATH Alanine aminotransferase 2, mitochondrial; TrEMBL-Plants: tr|I1MK72|I1MK72_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0408000
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:81140006..81146527) extracted from Lotus japonicus Gifu genome v1.2.

ACTTAAAATTAAAGCACAGTGCTGCTGCTACTCAAGCTCCACATTTTTTTGCACAACAGTTTCATAACATCAAAACTTCC AGTAAGTAACTTGAAAAGAAGTGATTTTTCAAGCCAAGTGCAAAAATCAGTACTTAATTACCCATTTTATCAACTCCACC GGTTTGTGTGCCTTCCGGATTTGAAATGACTCTTCCATTTTCCGAATCTGAATATATACCACAACTGAATTCACATAAAA ACCCAAATAAAGAAACATTGAAAGATTGAATTTTTTTAATATGCACCCAGGAACAAGATCACCGTCTTCATAATCAACAT CGTCCTTGCCGTCTTCCTCTGCTAGTCCTCGCCGTCCTCCTCCGCCAGTCTCATCAACCTCGTCCGAATGTTAGTGGGTC TGACCCAGAACCCCATATTTTCCTCCTTCATCCATCGCGAATAGCCATTGAATCTAAGCTCAGAGATCGCTTCCAACCCA GATCGATACCCAAAACTCAAAGGAAGGTTGATTTTGGGTTGTGACTGATGATTTTGAGGTGCGGAGGAGGAGAAGAATTC TGGATTTAAGAAAGCTTTGATTTTTTTCTTTCTGTTTGGCCAAGTCTTGTGGCTCTGATGAAGAGGGGAGAGGACGGTGA TGGTGGGTCTGATGACTTTGATCAAGATTTTGTGTTTATGTTTTCATTTTTCTGGAATTTGAAGAAGGGGATGAAGATGA TGGAGATGAACATAGTTTCAGATTCGGATTTGGATCTGTGAATTTGGGACTTGTTGAGACGTCAGGTACAGAAGATGAAG GGATTTTGTATAAGGAACAAAGGGCTTTGGATTCAATCTGAGATTATTTATCTAGGTTTGGAAATTTTTCTGGGTTTGAA CGTAGAAGAAGATGAAGATTTTTTTTGATAGGCAGAAGAAGATGAAGATGATGGTGATTAGGATTTATTAGAGAGTTAAT AATAATGATGATTAGGATTTGTTTAAATTTAAATGAAATTTTTTATTTATTGAATTTTTGTTTTTTTTTACTTACATGGA GTCTTAGTGGCAAAAATGTCAGAGCCACGTCATTTAATGACGTCCACATCAGCAACCTCCGTTAATCTTCAAACGGCTCA CTAATGGAAGGGGCTAATTTTCACAAATTCATACATGAGGGAGTAAATTCGCTCGTTTTAAACATGAGGGAGGAAAATTG CACAATGATGAAAGATGAGGGAGCAAATGTGCAATTAAGCCTACATAATTTATAAATATAAACATGATACGCAACCACTA TGAATCAGTGGAACAGATATAAATAATCCGTTGCTACAGAGTACAGAACCATTTGCTTGTCGGTGTTGGCATTGACATTT TGCATCCTCTCTTCAAGTTCAATGGCTTCCCCTCCTTCTGATTCCTCTTTACCTATAACAATCCACAACATTAATCCTAA GGTTTGTGCTTTCTTTTCTACTTGGTTCATGCTTGTGTGCTACATTTGCAAGCTTGGAACTGTAATGCTTGTTTGATGAA CAAATTTGTTTTTCTAGGTTCTGAAATGCAGGTGTGCTATACGAGGAGAGATCTTCTCACTTGCCATGGTAACCTGATTT GAGTGTGCATATTAATTAGAATTTGGTCTTTCATTTAAAAGCTGCTCTTGTCTTGGTCAAATATATATACATTGTATACC TTAGACTACAGAATAACTACTGAACTACTCATTGTAATTAGTTAAGAGGTTATGAGTTAGTTATTCTTAGTTGCTAAACT AGTTTCAGCTTAAGTTAGTAACTCATGTACACAATGCTTGTATATATTGTTCACTGTTAATCAAAGCAGAACTAACTTAC ATTTTCTGCTAAATCATTGATCTCAATATGATATAGAGTCTATCCTAGATCCATTGATTGAAGACCATCCATCAATGGGC CTCCCGTAGATGTTAATTCCTGCAAATTCCATATTCCAGATGTCCAACCCTGAGTGTGAGAGGATGTGTTAAACGTCTCA CATTGACTAGAGATATAGTTAAATAAATGTTTATAAAGGGTAGAGAAACTCTCACCTCTCGCTAGTTTTTGGGCTAGAAT TAAGCCTAATGCAAATTCTAACAACGCGTGTTAACGACAGTCTAGCTTGAAAAAACGAAATTGTCTTTGCTGATTAAACT TTGAATTAATGGTTCTCTTCAGAATTTTGTGAAGGCACCTAGGCATTAAGCATCATATTTATATTTTATACTGGTTCTTT CAACTTACAATGCTATAATGTTGCAGAAATTGCAACAAGAATTACAGGCAAATCCAGGATCTCATTCATTTGATGAGGTA ATTTTCAGCTTGAAAACTAATAAAATTATCCAATAAAGCAGGATAGATCTTTATCATTTTGGTTGAAGAAGTCACTTATG AGAGATGAATATAAAAAAACAAGTAATCTTTCTCTCTTTCTGCCTATTTTCTCCCACTGAAAATAGATACTTTACTGTCA CGCTGGAAATCCTCAATCTCTTGGCCAGCAGCCGATAACGTTTTTCCGAGAGGTTTGTTTCTTCTTGTTGTTCTTTTCGT TGTGGAAAGCAATAAGTAATTAACCTAAAAAGTTACAAATTAACCAATGCTTGTTATCATAGGTTCTTGCATTATGTGAC CATCCGGGTATTCTGGACAGAAGTGAAACACAGGATTTGTACAGGTAATTAGGATAAAGTCTAACTTCTTGACAACTAGT TATAAATAATTTGATGTTTCCTTAAATTGTACAAATTTTCATTTCACACTTCTAGATGTTATTTAGCATAATTTTTTTGC TGATAACCCTTGTCCAGATGGAACAAAATCATTGAAACTTGAACTATTTAGCACATTAGCTAACAGTTGCACGAGTTTAA CTAGTAAAGCACCAGGGGCATATGAGTTTGAATTTTTCAAGGAATATCAGTTTTGTAGATTTTTTTTTATTTAACTGATG TAATCTATCTTGTCCTGTGAAACAAGAATGAGTAAAATTTGCTTTCATTGCTGATGATGATATTATCATGAGTTTCTTCT ATATTCTGGATTTCAATATTCTTCCTCTTCTTATTCTCCCTTTGTGATTTCTTCCTATTCTCCCTCTATGATCTTCCTTT TCACAAATAACAGTTCTGATGCAATAGAGCGAACTAGGAAGATTCTGGATCAGATTCCTGCGAGAGCAACTGGTGCATAC AGTCAAAGTGAGGTAGCAATTTTCTTTTCTACTTTATACTTTATATTAGTATTTTTCAGTATCATACATTTGTAATGGGC ATGAAATTGTTCATATTTCCATATGTATCAGGGTATCAAGGGCCTGCGTGATACAATAGCTACTGGAATTGAAGCCCGTG ATGGGTTTCCTGCTCATCCTAATGATATTTTCTTGATCAATGGTGCAAGCTCAGCGGTAGCATTGAGTTTTTTTTTTCTT AAACATAAATAATTTCATAGTTTATTGGTTTTTTATTTTATTTAAAATATGGATAAGTTTTAAAAGACTGTCTTTTTCAA TGTTCAGATTGATATGATGTTACAATTACTGATAAGATCAGAAAGTGATGGAATTATGTGTGCCATCCCTATGTTTCCTC TGTACACAGACTTCATTGCCCTCCATGGTGGCTACCTGGTAAGGATTAATGAGTACTAAACTATAAAGGGGTTTTAATGC AGAACATAATTAAGTCCATGACTTTGAGGTTTGTTCTCTATGTGAAGATTTAGTTGGCTATGGGCCATTTTTTGCAGAGA AATTTAGAAACTTTACATAATGTGTATTTGTTTGGTATTATTGAAGCTTTTATTGGCTTGGAATCTGGGGCAAGTTGGTG TTAAGGTCATACGTTGACTAAAGATATGACCTAAGAAGTTCTTGTAATAGTTGGAAAATTGGAATATGTAATTGCTATGA TACTTTACATTGGTTGCAATAGTAACAATTTTGATATTGTTATGAAGGTACCTTATTATCTAGATGAAGCAGCTGGTTGG GGGTTGGAAATATCCGAACTCCAGAAGCAACTGGGAGCTGCCAGGTCCAAGGGCATCAATGTGCGGGTTTTAGTTGTTAT AAATCCAGGCAACCCGACGGGTCAGGTTAGATGCAAATACTTCAGTCTTGAGAAGTTTCACATTGACAAGAGATATGACC ATATAAGTGTTTATAAAGGGTAGAACAATCTTCATATCTAAACTAGCTCTTAATGTAGAGTTACGCCTACCACAAATTCT AACACACAAATGGTGTTAACTTAGGGGGATGAAGCTATAATGATTATTTATAACATAACATGGTTTCTTTGACATGACAC CAGGTTCTTTATGAGGAAAACCAACGTGATATCGTAAAATTTTGCAAGCAAGAAGGGCTGGTTCTTTTGGCTGATGAGGT ATAACTGGACTCCTAAGGATACACAGTCATCCAATTTTAATACTTAATTATTGAACATGATATTCATTTAACAGGTTTAT CAAGAGAACGTTTATGTTGTTGAGAAGAAATTCCAGTCTTTTAAGAAGGTATCTCGGTCCATGGGATATGGTGAGAATGA TATCTCTATAGTATCCCTTCATTCAATCTCCAAAGGTAAGTTAACAAATAAAATAAGAGAAATTAATGGATGCAAATATA TATATATAGGTGATTCATAGTGATGGATCATGTGTTTTTGCTCTGTGGCTTCAGGGTATTATGGGGAGTGTGGGAAAAGA GGAGGTTATATGGAGGTGACTGGGTTTTCTGCAGATGTGAGGGAACAGATATACAAGCTGGCATGTTTTAATCTTTGTTG CAATATAACTGGTCAAATTCTTACTAGCTTGATCATGAGTCCACCCAAGGTTAATTCTTTCTCTCCCTATAGTTGCATTT AATTTTTGGGGGATAAAATCATGTAGATTGGGAACAAATACAACATTTAACATAATTGTATCAATGAGAGGATTAGTGCT TGAGTGGCAACCTAATGAACTTACAAACAATATCTCAGAAACAGAGGTCAAATGACAGTGGACATCCTTAATTGCTAGTT AGGTACACTCAGAATATTGGTCAATAACAATAGGATCAAATGTCTCTACACTGTTGGTGTAAATTTTATTTACATAGACA TCCTATCTTTCCTACCCGTTTTCAAAGTTTCAGAAATATTATCAGACAGGTTAGAAATTCAGCACATTCCACCACTAGTT CAATACTAATACTAACATTTGACATTCAGTGAATTCATTTGGTTTGTTTCTGCAGGTTGGAGATGAGTCCTACGAGTCAT TTTGGGCCGAGAGGGATGGAATTTTATCATCCTTTGCTAGGGGTGCAAAGGTCAGTTACCAGAAAAAGGAACTAAGAAAT TAATTTTCTAAAGAATACTAATATGTCACTATTTCTATGGTTTGAGTGCTGAGTACTAAACACTTTGTTTAATTTTTCTT GGTGATTTATCCTATTGACACTCACAGACAATGGAAGAAGCATTTAACAAGTTAGAGGGTGTAACATGCAACAAAGGAGA AGGGGCAATGTATTTGTTTCCTCGTGTTCGCCTTCCTTTAAAGGCTATCAAAGCAGCAGAGGCTATTAATGCAGCTCCTG ATGACTACTACTGTCGCTGCCTGCTCAACGCCACAGGAATACTTGTTCTTCCTGGTTCTACCACTGGACAGGTTACTTTA TATTTATATGGTGCTTCATTATTACAACCAATAATAATACTGGTGTTGGTTCCAACTTCCAACTAATTAGCTACATTAAA TTTGCATGATTAATTATAAACTAGTTGTATTGTTAAAATTGTTGTGTCTTGCAATGCAAGGTTCCTGGCACATGGCATTT TAGGTGCACCATACTGCCCCGAGAAGACAAGATTCCAGCTATTGTCTCGCGATTCACAGAGTTCCACAAGAAATTCATGG ATGAATTCCGCGACTGATCGATGAGAGATCCTGCTTGAGCACTTCCATTAAGGATATCAAATCTTTGAATAAAACAACGG TGGCTTCTAATGTGAAGCATCACATGGGTGCTTTGCCAAAACACCACCTATTTTTATGGGCTACAGCAGGTTTCGTTACC TGCTATGAAGTTTACCCATAAAACCATTAATTGTTTGTAATTGTAAGTTGTAATTGTTACTAAGGGTCTCTAGTTTGTAT GAAATCCTCAACCCCTGCATTTTGAAACCCTACTAGGCTGATTAAGATAATGTATTATTCAACACTTAATCAGTGGATGA AACAAGTAAAAGCAGACCAAGAGATCATCAGCATCAGCAAATATTCGAGTAGAGCAATGTAATTTTTCCCAAAAAAAATT TGCAAATTGTGATTCTGATATAGAAACATTACAGACTCAAAGGACCACGCACATAAAAAGTGATTGTTAGAACTCTAAGG TCAAGAGTTTGATCCTTACGAGCCTCACTTTTAGGATGATCTCTGATGAGGGCCGTGTAGGCCACAAGGTAAATGAGACA TTTGCCTTAGGCCTCAAACAAATAAAGATGTATATTTGGCCC
Download Genomic Sequence

CDS sequence (LotjaGi3g1v0408000.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGCTTCCCCTCCTTCTGATTCCTCTTTACCTATAACAATCCACAACATTAATCCTAAGGTTCTGAAATGCAGGTGTGC TATACGAGGAGAGATCTTCTCACTTGCCATGAAATTGCAACAAGAATTACAGGCAAATCCAGGATCTCATTCATTTGATG AGATACTTTACTGTCACGCTGGAAATCCTCAATCTCTTGGCCAGCAGCCGATAACGTTTTTCCGAGAGGTTCTTGCATTA TGTGACCATCCGGGTATTCTGGACAGAAGTGAAACACAGGATTTGTACAGTTCTGATGCAATAGAGCGAACTAGGAAGAT TCTGGATCAGATTCCTGCGAGAGCAACTGGTGCATACAGTCAAAGTGAGGGTATCAAGGGCCTGCGTGATACAATAGCTA CTGGAATTGAAGCCCGTGATGGGTTTCCTGCTCATCCTAATGATATTTTCTTGATCAATGGTGCAAGCTCAGCGATTGAT ATGATGTTACAATTACTGATAAGATCAGAAAGTGATGGAATTATGTGTGCCATCCCTATGTTTCCTCTGTACACAGACTT CATTGCCCTCCATGGTGGCTACCTGGTACCTTATTATCTAGATGAAGCAGCTGGTTGGGGGTTGGAAATATCCGAACTCC AGAAGCAACTGGGAGCTGCCAGGTCCAAGGGCATCAATGTGCGGGTTTTAGTTGTTATAAATCCAGGCAACCCGACGGGT CAGGTTCTTTATGAGGAAAACCAACGTGATATCGTAAAATTTTGCAAGCAAGAAGGGCTGGTTCTTTTGGCTGATGAGGT TTATCAAGAGAACGTTTATGTTGTTGAGAAGAAATTCCAGTCTTTTAAGAAGGTATCTCGGTCCATGGGATATGGTGAGA ATGATATCTCTATAGTATCCCTTCATTCAATCTCCAAAGGGTATTATGGGGAGTGTGGGAAAAGAGGAGGTTATATGGAG GTGACTGGGTTTTCTGCAGATGTGAGGGAACAGATATACAAGCTGGCATGTTTTAATCTTTGTTGCAATATAACTGGTCA AATTCTTACTAGCTTGATCATGAGTCCACCCAAGGTTGGAGATGAGTCCTACGAGTCATTTTGGGCCGAGAGGGATGGAA TTTTATCATCCTTTGCTAGGGGTGCAAAGACAATGGAAGAAGCATTTAACAAGTTAGAGGGTGTAACATGCAACAAAGGA GAAGGGGCAATGTATTTGTTTCCTCGTGTTCGCCTTCCTTTAAAGGCTATCAAAGCAGCAGAGGCTATTAATGCAGCTCC TGATGACTACTACTGTCGCTGCCTGCTCAACGCCACAGGAATACTTGTTCTTCCTGGTTCTACCACTGGACAGGTTCCTG GCACATGGCATTTTAGGTGCACCATACTGCCCCGAGAAGACAAGATTCCAGCTATTGTCTCGCGATTCACAGAGTTCCAC AAGAAATTCATGGATGAATTCCGCGACTGA
Download CDS Sequence

Protein sequence (LotjaGi3g1v0408000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MASPPSDSSLPITIHNINPKVLKCRCAIRGEIFSLAMKLQQELQANPGSHSFDEILYCHAGNPQSLGQQPITFFREVLAL CDHPGILDRSETQDLYSSDAIERTRKILDQIPARATGAYSQSEGIKGLRDTIATGIEARDGFPAHPNDIFLINGASSAID MMLQLLIRSESDGIMCAIPMFPLYTDFIALHGGYLVPYYLDEAAGWGLEISELQKQLGAARSKGINVRVLVVINPGNPTG QVLYEENQRDIVKFCKQEGLVLLADEVYQENVYVVEKKFQSFKKVSRSMGYGENDISIVSLHSISKGYYGECGKRGGYME VTGFSADVREQIYKLACFNLCCNITGQILTSLIMSPPKVGDESYESFWAERDGILSSFARGAKTMEEAFNKLEGVTCNKG EGAMYLFPRVRLPLKAIKAAEAINAAPDDYYCRCLLNATGILVLPGSTTGQVPGTWHFRCTILPREDKIPAIVSRFTEFH KKFMDEFRD
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR11751:SF470
7 489 483 2.7E-268 –
PANTHER
PTHR11751
7 489 483 2.7E-268 –
Gene3D
G3DSA:3.90.1150.10
11 87 77 3.4E-15
IPR015422
SUPERFAMILY
SSF53383
16 483 468 3.89E-63
IPR015424
CDD
cd00609
106 478 373 4.70094E-48 –
Pfam
PF00155
114 462 349 2.6E-30
IPR004839
Gene3D
G3DSA:3.40.640.10
117 361 245 2.0E-65
IPR015421
Gene3D
G3DSA:3.90.1150.10
362 479 118 1.8E-11
IPR015422

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003824
Molecular function Catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
Subterm of
GO:0009058
Biological process Biosynthetic process The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.
Subterm of
GO:0030170
Molecular function Pyridoxal phosphate binding Interacting selectively and non-covalently with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0408000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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