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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0412200 |
| Transcript ID | LotjaGi3g1v0412200.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Exocyst complex component, putative; TAIR: AT1G72470.1 exocyst subunit exo70 family protein D1; Swiss-Prot: sp|Q9LZD3|E70A1_ARATH Exocyst complex component EXO70A1; TrEMBL-Plants: tr|A0A1J7GPX5|A0A1J7GPX5_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0412200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:81626527..81628516) extracted from Lotus japonicus Gifu genome v1.2.
TCTTCCCACCTTCAAACTCAACTTTAACTCACTACTACCTTTATCACTTCTTTCCCCTTTTACTTTTCCTCCCTATTTCC CTCTCCACCCAATCATGGACCCGCCGGAGACCTTGCCGTTAGAAGCGGCGGAGAAGATCATCCTCCGGTGGGACTCCACC GCCTCCGAAGACGCCCGTGAGAAGATGATATTCGACGGCGAACGTGAAGAAGTCGATCTCTACCTCCAAGCCGTCGACGA AATCCAACGCTCCATGTCCTCCACCACCATCTCCGACGACCAAGACAAAGCCACCTCCGCCATCCAGATCGCCATGGCTC GCTTAGAAGACGAGTTCCGCAACATCCTCATCTCCCACACCAACCCCATCGACCCAGCTTCCCCGTTTCTCCACCCCAAC ACCGAAGAAGACGAAGATCAACACCACCACCACCACCACTCTTCTTCTTCCTCCTCCACCCCCCAACGACTTCACCATGA TGCTGTTGATGATGGCGGCGGCGATGTTGATGTTGATGTTGTTGACGACGGCAAGCTTCTCCGCTTCGACAGTGGCAGCT CTGTCGCTTCCTCCAGTGTCCGGAGCAGCTACCGCTCCACCAGCAGCATCCGCGAGATCGATCTGATACCCTCTGACGCA GTCTCCGACCTCCGCTGCATCGCCGAGAGGATGATCTCCTCCGGCTACCTCCGCGAGTGCATCCAGGTCTACGGCAGCGT GAGGAAATCCGCGGTGGATGCTAGCTTCAGGAGGCTCGGGGTTGAGAAGCTCAGCATCGGCGACGTTCAGAGGCTGGAGT GGGAGCAGCTGGAAGCCAAGATCAGGCGTTGGATAAGAGCTGCTAAGGTCTGCGTGAGAACCCTCTTCGCCAGTGAGAAG AGGCTCTGTGAGCAAATCTTTGATGGTGTGGGAACTGCGGTTGATGATGCTTGTTTCATGGAGACAGTGAAAGGGCCTGC AATTCAGCTTTTCAATTTTGCTGAGGCAATCAGTATAAGCAGGAGGTCGCCGGAGAAGCTATTCAAGATTCTTGACCTCC ATGATGCCCTTATGGATTTGATTCCTGACATTGATGTTGTTTTTGACTCGAAGTCGTCGGAGTCGATTCGTGTGCAGGCT GCGGAGATTCTCTCGCGATTAGCCGAGGCTGCAAGAGGGATTTTGTCTGAGTTTGAGAATGCTGTGCTTAGGGAGCCTTC TAAGGTTCCTGTCCCTGGTGGGACAATTCACCCTTTGACTAGGTATGTGATGAATTACATAAGTTTGATCTCTGATTACA AGATGACTTTGTATGAGCTTATAGTGTCTAAGCCGTCGACCGGGTCGAGATATTCGGGTGATCCTTCGACGCCGGATATG GATTTTACTGAGCTGGAGGGGAAGCCCCCTTTGGCTATTCATTTGATTTGGATTATTGTGATATTGCAATTCAACTTGGA TGGTAAGTCCAAGCACTATAAGGATAACTCCTTGTCTCACCTTTTCATAATGAACAATGTCCACTACATTGTTCAGAAGG TGAGAGGCTCTCCTGAATTGAGGGAGATGATTGGAGATGATTACTTGAAGAAGCTTACAGGGAAGTTCAGGCAAGCTGCT ACTAGCTACCAGAGAGCAACTTGGGTGAGGGTGTTGTATTGTTTGAGGGATGAAGGGTTGCATGTGAGTGGTGGCTTTTC TTCCGGGGTCTCGAAGAGTGCTTTGAGAGAAAGGTTCAAGGCCTTCAATGCTATGTTTGAGGAGGTTCACAGGACTCAAG CCGTGTGGTTGATACCGGATTCGCAGCTCAGGGAGGAGCTCAGGATATCTATATCGGAGAAGCTGATCCCGGCGTATAGG TCGTTCCTCGGGCGGTTCAGGAGCCACATAGAGAGCGGAAGACATCCGGAGAATTACATTAAGTATTCTGTTGAGGACCT GGAGGATGCTGTGTTGGATTTTTTTGAAGGAACTCCTGTTTCGCAGCACTTGAGAAGGAGATCTGAATGA
CDS sequence (LotjaGi3g1v0412200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGACCCGCCGGAGACCTTGCCGTTAGAAGCGGCGGAGAAGATCATCCTCCGGTGGGACTCCACCGCCTCCGAAGACGC CCGTGAGAAGATGATATTCGACGGCGAACGTGAAGAAGTCGATCTCTACCTCCAAGCCGTCGACGAAATCCAACGCTCCA TGTCCTCCACCACCATCTCCGACGACCAAGACAAAGCCACCTCCGCCATCCAGATCGCCATGGCTCGCTTAGAAGACGAG TTCCGCAACATCCTCATCTCCCACACCAACCCCATCGACCCAGCTTCCCCGTTTCTCCACCCCAACACCGAAGAAGACGA AGATCAACACCACCACCACCACCACTCTTCTTCTTCCTCCTCCACCCCCCAACGACTTCACCATGATGCTGTTGATGATG GCGGCGGCGATGTTGATGTTGATGTTGTTGACGACGGCAAGCTTCTCCGCTTCGACAGTGGCAGCTCTGTCGCTTCCTCC AGTGTCCGGAGCAGCTACCGCTCCACCAGCAGCATCCGCGAGATCGATCTGATACCCTCTGACGCAGTCTCCGACCTCCG CTGCATCGCCGAGAGGATGATCTCCTCCGGCTACCTCCGCGAGTGCATCCAGGTCTACGGCAGCGTGAGGAAATCCGCGG TGGATGCTAGCTTCAGGAGGCTCGGGGTTGAGAAGCTCAGCATCGGCGACGTTCAGAGGCTGGAGTGGGAGCAGCTGGAA GCCAAGATCAGGCGTTGGATAAGAGCTGCTAAGGTCTGCGTGAGAACCCTCTTCGCCAGTGAGAAGAGGCTCTGTGAGCA AATCTTTGATGGTGTGGGAACTGCGGTTGATGATGCTTGTTTCATGGAGACAGTGAAAGGGCCTGCAATTCAGCTTTTCA ATTTTGCTGAGGCAATCAGTATAAGCAGGAGGTCGCCGGAGAAGCTATTCAAGATTCTTGACCTCCATGATGCCCTTATG GATTTGATTCCTGACATTGATGTTGTTTTTGACTCGAAGTCGTCGGAGTCGATTCGTGTGCAGGCTGCGGAGATTCTCTC GCGATTAGCCGAGGCTGCAAGAGGGATTTTGTCTGAGTTTGAGAATGCTGTGCTTAGGGAGCCTTCTAAGGTTCCTGTCC CTGGTGGGACAATTCACCCTTTGACTAGGTATGTGATGAATTACATAAGTTTGATCTCTGATTACAAGATGACTTTGTAT GAGCTTATAGTGTCTAAGCCGTCGACCGGGTCGAGATATTCGGGTGATCCTTCGACGCCGGATATGGATTTTACTGAGCT GGAGGGGAAGCCCCCTTTGGCTATTCATTTGATTTGGATTATTGTGATATTGCAATTCAACTTGGATGGTAAGTCCAAGC ACTATAAGGATAACTCCTTGTCTCACCTTTTCATAATGAACAATGTCCACTACATTGTTCAGAAGGTGAGAGGCTCTCCT GAATTGAGGGAGATGATTGGAGATGATTACTTGAAGAAGCTTACAGGGAAGTTCAGGCAAGCTGCTACTAGCTACCAGAG AGCAACTTGGGTGAGGGTGTTGTATTGTTTGAGGGATGAAGGGTTGCATGTGAGTGGTGGCTTTTCTTCCGGGGTCTCGA AGAGTGCTTTGAGAGAAAGGTTCAAGGCCTTCAATGCTATGTTTGAGGAGGTTCACAGGACTCAAGCCGTGTGGTTGATA CCGGATTCGCAGCTCAGGGAGGAGCTCAGGATATCTATATCGGAGAAGCTGATCCCGGCGTATAGGTCGTTCCTCGGGCG GTTCAGGAGCCACATAGAGAGCGGAAGACATCCGGAGAATTACATTAAGTATTCTGTTGAGGACCTGGAGGATGCTGTGT TGGATTTTTTTGAAGGAACTCCTGTTTCGCAGCACTTGAGAAGGAGATCTGAATGA
Protein sequence (LotjaGi3g1v0412200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDPPETLPLEAAEKIILRWDSTASEDAREKMIFDGEREEVDLYLQAVDEIQRSMSSTTISDDQDKATSAIQIAMARLEDE FRNILISHTNPIDPASPFLHPNTEEDEDQHHHHHHSSSSSSTPQRLHHDAVDDGGGDVDVDVVDDGKLLRFDSGSSVASS SVRSSYRSTSSIREIDLIPSDAVSDLRCIAERMISSGYLRECIQVYGSVRKSAVDASFRRLGVEKLSIGDVQRLEWEQLE AKIRRWIRAAKVCVRTLFASEKRLCEQIFDGVGTAVDDACFMETVKGPAIQLFNFAEAISISRRSPEKLFKILDLHDALM DLIPDIDVVFDSKSSESIRVQAAEILSRLAEAARGILSEFENAVLREPSKVPVPGGTIHPLTRYVMNYISLISDYKMTLY ELIVSKPSTGSRYSGDPSTPDMDFTELEGKPPLAIHLIWIIVILQFNLDGKSKHYKDNSLSHLFIMNNVHYIVQKVRGSP ELREMIGDDYLKKLTGKFRQAATSYQRATWVRVLYCLRDEGLHVSGGFSSGVSKSALRERFKAFNAMFEEVHRTQAVWLI PDSQLREELRISISEKLIPAYRSFLGRFRSHIESGRHPENYIKYSVEDLEDAVLDFFEGTPVSQHLRRRSE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 7 | 115 | 109 | 0.0 | – | |
| PANTHER | 7 | 115 | 109 | 0.0 | ||
| Gene3D | 21 | 133 | 113 | 6.9E-8 | – | |
| SUPERFAMILY | 37 | 618 | 582 | 2.93E-163 | ||
| MobiDBLite | 92 | 137 | 46 | - | – | |
| MobiDBLite | 100 | 115 | 16 | - | – | |
| Gene3D | 149 | 627 | 479 | 4.7E-184 | – | |
| PANTHER | 160 | 627 | 468 | 0.0 | ||
| PANTHER | 160 | 627 | 468 | 0.0 | – | |
| Pfam | 245 | 612 | 368 | 3.0E-123 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Exocyst | A protein complex peripherally associated with the plasma membrane that determines where vesicles dock and fuse. At least eight complex components are conserved between yeast and mammals. | ||
| Biological process | Exocytosis | A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle. Exocytosis can occur either by full fusion, when the vesicle collapses into the plasma membrane, or by a kiss-and-run mechanism that involves the formation of a transient contact, a pore, between a granule (for exemple of chromaffin cells) and the plasma membrane. The latter process most of the time leads to only partial secretion of the granule content. Exocytosis begins with steps that prepare vesicles for fusion with the membrane (tethering and docking) and ends when molecules are secreted from the cell. |
Expression pattern of LotjaGi3g1v0412200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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