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LotjaGi3g1v0424000.1

Overview

Field Value
Gene ID LotjaGi3g1v0424000
Transcript ID LotjaGi3g1v0424000.1
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Cell-wall invertase; TAIR: AT3G13790.1 Glycosyl hydrolases family 32 protein; Swiss-Prot: sp|Q43089|INV1_PEA Beta-fructofuranosidase, cell wall isozyme; TrEMBL-Plants: tr|A0A072TLX8|A0A072TLX8_MEDTR Cell-wall invertase; Found in the gene: LotjaGi3g1v0424000
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:83314533..83323312) extracted from Lotus japonicus Gifu genome v1.2.

TGCTTCTCTCACATGATCTTTGAATTTTCACTCCATTAATGCTCTATATCCATTGAAAAGTTTCTCAGTACTCTCTATAA ATAGAATAGGGTAGCAGAGCACCCTTCTTCCCTCCACATTCCTACATAACCACCATGACTACCTCTACTATCTGTCTCTT GGCTCTACTCTGTATCATTTATTCTACTGGTGTTCTTCCTGTTGAAGCTACCCACCATGTTGACAGAAATCTTCAGAGCC TAACTTCTGACTCCTCCAATCAACCTTATAGAACTGCTTACCACTTTCAACCTCCCAAGAATTGGATAAATGGTAATAAC ATATGTTTCTTTGGTCTCCTACCCTTTCTTCCTATGATTCCTTTTTTATATTTCTGACAGATTCTTCTTTTGCTTCTTGT TTTTGTCATTTGACATGTTATGCTGAAATGGACATGTTGGTGAACATTGACTTTCAGATCCTAATGGTTAGTAATCCAGT TCTCTTATCATCACCATCAATACACTTTTTATTGTTTGTATTTGCAATTTCTCTTAACATATGAGGACGAGGTTCAACCC AACAATAAACTTAACTTATTTTCATCATGTGATTTTGGGGTCACAAGTTTGAGTTGTATACTGGCTTTTTGTAAAACATA AAATAAGACTGTCTAAATTTAAAATTTGTTAGGCCTCTTAAATCCCAAAACTCAGGACATAGCATCAAATTTTCCATTTT CCTTCTACATATCCATCATAGAAATATGACCACGATTCCTGTTCTCGTGACTACTTTCAGAAAAATAGCAAAATGATTTC AGAATTCCATATAAGGCACACCAGCTCAAAGTTTTTTTCTTATTTTTCTATTGGTAACGAGGTTCATGCCTGTTAGCTTT CAACCAACTTGGTCCTTATCAATGCACATTTATAATCATTTATTCTCTATCGTAGGGCTAGAGTGAAAGAAATTGATCAT CTATATTTGATTACGTTGTTTCTCTTCTCTTATTGGCTAATCAAATAACTTCATCATTTCGTTGAAAAAATGACATTATA ATAAAGGTGCCCACTAGGGTGGACCTTTTATATTTTGGTCCACCCATGCACCATGATTCATAACCATTGGATCTTAGCAT TTTGGAATATTTTTTAATTGGATGGTCAAGATTTAATTGATGAAAAAAGGGTAAAAATGTCAAACCCTTCTTCCCCACCC CTTCCCCTTCTTGCTGGAACTTAACCACTGTCCATTGCAGACGCAGTTCGAACTTCTACCTCCATTTCTCAACTTCATTT CCCAACACCTCAAGTTGCAGTGCAGAAGTTCTTCAAGTTCTCTTCATAATTTTCCATTTTTCCTGAGCATAAATCAAGCA GATCTTACAACACAAGTTCTTCAACTTCTCTTCATAATTTTCCACTTTTATGGGCATAAATCAAGCAGGTCCTACAACAC ATTCACATAAACATAGAAATATTCAAAAATCGTGCAATAAGATGGAATTAGATTGAAAAAAACCAATTTACATCCAAGTA CTCCAGACAGGCGTATTTACTCACAAGAATGTCAATGCCCGTCACTGTGACCTTCAAAATATTCAAACTCAAACCAGGCT CCCCACTGCCTATATTCTGAAAAGCAGCATCGTCCACCATGCCTCAAGATCCACAGATCTGGTTCGTTTCACTATGTTCA CACCGATTTGGGTTCGATTCACCCTTTCAGATCTGGGTTCGATTCACTCTGTTCACACCGATCTAGACTCACACTCGCTG CGCCGCCGATCTAGCACAGTGCCGCGTCGCGTTACCCCGCCGGCCGCCACCGTGACGTCGTACAATCCACAGTGGCTCTT GGGGCTCTCGACATGTGCAAAAAGAAAGGGGTTTCAGGGAGATAAAGAAGGAAAGCCATGGTGCTGGTGATTTGTCAGAA GAATATGAAGAACGAATGCCATGGTCGTGGGGATTTTCCAGAAGAAGCGTGAAGAGGATTGAGAGACGGAGAGAAATGCG TGAGTGAGGAGAGAGAGTTTCATTTTAGGAATTAATTTTTTTAAATATTTTCCTTTTTACAAATTACTAATATAACCATG GTGCATGGGTGGACCAAAATATAAAAGGTCCACTCTAGTGGGCACCTATAATAAAAATAGTCATTTATTACAGAAGAAAA TCTTTCAGAGCAGAAATATTGTTTATCAATAAAGTCTAGGCTAACACTATTAGTAGATAATTAGATCTGTTTTTAGTTTA ATTTCGTTCTTTATGTATGAAAAATAATTTGAAGATGTCTATGTAATCTCTGAACCTTAAAGGAATTAGTCTCATTTCTA ACCGCTGTGAAAACATCTTAGAATTTTTTTTTTTATCAAAATATAAAAAGGAAATCTGGATCTGGTAAGATGTTAACGAA TTCAAAAGTTGATGCGTGTCCTTTTCTACCTCTTTACATATTTTTCCTGGAAAAAAAAATGTCCTTATATATTTGACTTA TTTTGTAGGACCATTGGCATACAAGGGACTCTATCACCTGTTCTATCAATACAATCCTAAAGGAGCAGTGTGGGGAAACA TCGTATGGGCCCACTCCGTATCAACGGATCTCGTGAACTGGACCCCACTAGACCCCGCCATCTTCCCATCTCAACCGTCC GATATTAACGGCTGTTGGTCAGGGTCAACCACAATCCTACCCGGGGGCAAACCCGCCATTTTATACACTGGCATTGACCC AATGAACCAACAAGTCCAAAACCTGGCCCACCCCAAAAACCTGTCTGATCCATTTCTTAGGGAATGGGTTAAGTCACCAA AAAATCCTCTAATGGCACCAACAATTGCTAACAAGATCAATGCAAGTTCATTCAGAGACCCTACAACTGCTTGGTTAGGC AAAGATGGACATTGGAGACTGCTTGTTGGGAGCAAAAAGAACACTAGGGGGATGGCAATTTTGTATAGGAGCAAAGATTT TGTTAATTGGGTTCGAGCCAAACATCCGTTACATTCCGAAAAAGGAACCGGAATGTGGGAGTGTCCTGATTTTTTTCCGG TTTTGCGTGTCGGCCCGCTAGGTATTGACACGTCTGTGGACGGTGTTCAAGTCAGGCACGTGCTCAAGGTTAGCTTGGAT GATAAGAAACATGATTACTACGTGATTGGGAGTTATGATGCTGAGAAGGATAATTTTGTCCCGGATAATAATAAAGGGTT TGAGGGTGATGTTGGGACGGTTTTGAGATATGATTATGGGAAATACTATGCGTCCAAAACTTTCTTTGATGATGAGAAGA ATAGGAGGGTTTTGCTTGGTTGGGTCAATGAGTCATCTAGTGTTGCTGATGATATCAAGAAAGGGTGGTCTGGAATCCAT GTGAGTTGTTGTTTTGGTTGCTATTTTTTTAATTTGTTGATGTCGGTTTGTTTATTTTTTAAAAATCAAGATGAGAGTTG AATCAAATTTAAAAAGACTTGAAACTTGAATTGATAATTGGGAAATGGTTTAATATATACTCCGTAGTAACATGAGCCAG CTAGTTAGACAATGACGAGAGAATTGGCCAATTTACATATTTAAGTTCCACAATGGTGTCTTATTGTCTGTCCTTCCAAT TAAAATTAACACATCATCACTAGTAATTTATCCCTGTTAAGTAACGTTGTTAACTTGAATATGGTGTATCCGTCTAAACT TGGTCCCTGTTCTCCCACACAAAACAGTCCCTGTTAAGTAACGTTGTTACAGTGCGGCCATGGCTTAGGAACAACAACAA ACATGGAATCTTGACTGATTGTTGATTATGGATCTCTGCAGTGGCAAATAGGAGTGGGGTTTCAATGGTTTAAAAGGGAA AATCTTTGATCTGCGTTTTTTAGAAGAAGAAAAAAAAGGAATCAAAACAATAACCCCAACCCTAACCAATTTCAACATGC TTCCCAGAAATTGTATCTCTTGAACAAGAATCGCAGCCCCAAGCTCAGAAATCATATCTCTTGAAATCATGTCTCTATCA TCCTTTTTTATATTGGGGTTTGATACATTTTAATTTAGCTAGACATTGGAAACGTTGGAAAGAAAAATAAATGGAACTCA AGGAGAAATTGCAGGAAGCATGGTGCTGCTGCAGGAGGGTCAACGAGAGGAGAAAGAAGAAAAAACATAAAACGTCTGTT AAATAAAAATGAAATCTGAGGTGTAAATTTTAAATGATATGTCATGTTTTTATTGGAAGGACAGGGTTGGAGACAGGGAT GTGAGACAGAAGATCTTCACTCCTTCTAATCAGGAATAATACTTAAGTCTTAAAATATGTAAATACTAAATAGTGTGCAG ACACTTTCAAACATTTCATTTTTTCTTAATTTCTCTTCCTTATCACATTAATTAGGTGACATAAATAATGTCTTTATCTT CTTTTCATTTTTCACTCTGTGTATCTGTTGAGACGTTGAGTATATACGATTTAAATGTCCCAAGAATTATTTTCCGGGTG CTAGTAGCAGGGTAAAATTTGACAAAAAATGCACGTGTATTTGCAGACAATTCCAAGAGCTATCTGGCTGCATAAGTCTG GTAAACAGTTGATACAGTGGCCTGTGGTGGAAATTGAAAAGCTACGTGCAAACCCTATCAACTGGCCCACCAAAGTGCTC AAGGGAGGTGACCTACTTCAAATTAATGGTGTAACAGCAGCACAGGTGAGTTTTGCTTGAGTATAGTTTCACTTTAATAA ATTAATAATAGTAGTATGTTTGGATTAGTTTTTTTTTTTCATAATCAATTTAGGCATTTATAAACTACTTATAGAAGTTT CTCATAAGAACTTGTTAAATAATGCACTAATACAACATAGTTCACATTTGGAAATTCTTTTATAATTAATTTTGAACTCA GAATCAATTCTGGAGAAGCTTGTAGTTTTAGGCTCCATAATTGATTCCATTGTGAGTGAAGTTGATCCAATTATCCAAAT ATGTTATAACTTTTATATATATATATATATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCCC GTGCGTGTGTGCGTGTACGTGTGAGAGAGATCTGCTAAGTTCTTGCATTTATATTTGTGCACAACTTCAACTTGAATCCA GCTTTAAGTTCAATTATAATAGAAAGTTCAATTTGAGGTTACTTGACCGATACACATGCAACAAAATAATACTACCAAGG TCATTTAAATACCATTATTTACTTAATGTTGATAGAGTTTGCTGCTTTAATAAAATATTTATAGTTTCTATGGTTATCAT ATTCTGTATCCAAATCCACTTAATCATCCTCCAATTATTAATCATCTTTAATAAAGGGTAAATTGAGATATAGCATAGAT GAAGTGTCCCTTATAATAAAATGGGTATGGTTATTTTTCACATTGATTAGAATAGACTAATCATTTGTCCTTTGCAGGCT GATGTTGAAATTTCATTTGAAGTAAAAGAGTTTGGAAAGGCTGAAGTTTTGGAGTCTTGGAAGGACCCACAAATTCTGTG TAGCCGAAAGGGTTCAGCCGTTAGAAGTGGACTGGGACCTTTTGGTCTGCTAGTTTTTGCTTCAAAGGGATTGCAAGAGT ATACGGCAGTTTTCTTCAGAATATTTAGATACCATCACAAAAATTTGGTGCTCATGTGCAGTGACCAAAGCAGGTTTGTC CCTAGCCCTCAAACTTTGCTTCTTTTTATTTCATCAATTCATCTTTTCTCCAATCCTTTGTTCAAAATCTTATATATATA TATATATATGATAAAAGAAATGCACCTTTAACAGGTCTTCCCTGAATAAAGAAAATGATAGGACCACTTATGGAACTTTT GTTGATGTGAACATTATTTATGAGAAGCTGTCATTGAGAGCCTTGGTAAGTTCCAATTGATGAAAGAACTTCCTTATCGT TGTATAATTTTATTTGAAAATTACAGTTTTTGGGATATTTTTTTTTTATTTACCAATCTAGTATAAATCATCATTGTCAC TGTCAGTGACGATTTTTTATTTTTTTAAAGAATCGCCAATAGCATTGGCGTTTTACTTTTTTTTTTCATTTTTGCCTTTT ACTACTTGAGTACAAAAGCCCTTCCTTATTTTACTACTTGAGGAAAATACCCAAAAGCTGTAATTTCTAAACAAAATTAT ACTACTTGAGTACAAAAGCCCTTCCTTATTTTCAATTCATCATTTTTTTCTTTTTGCCTTTTTAATGCAAAGAGTTTCTT CTTTTCACAGATTGATCACTCTGTTGTGGAGAGTTTTGGAGGAGAAGGAAAGGCTTGCATCACAGCCAGAGTTTATCCCA CATTGGCCATAAATGATAAAGCACAAATTTACGCTTTTAACAATGGAACTGCTGATGTCAAGATCGCGAGATTGAGCGCT TGGAGCATGAAGAAAGCTCAAATAAGCTAAGCTGAAAAAAAGGAGATCCAATCCTGGAATCAGAACAGTGCTAGTTCATC ATGAGAGTTTTTTAGGGACTTCGATTAAAGGCTCGAAATAGCATTACTGTAACACTAAATAATATCATACGATATATGAT CAAAGTTGAAAAAACTTAAATTCAAGTTATTTAATGTGAATTTGTCTGTAACTCTGTCCTCAATGAATTTTTAACATTTG TTCTCTCGGCTATAACTGCACTTTGAGAAAAAAATGATCCATGCCTTGATAAAATTGTTTAATGTCCCGTTTGTAGTAGT GAATTGCCATGTTTGTGATATGTTCTGATTTTGTGCACATTATTTTTCTTATAAATTCTTCCTTCCTCTAACTCAGAAAA AAATTCCAAATCTTATAGATAGATAAGAGTCTCATCACAAGACCCCATTAATGTAAAAGAACAAGGAAAGGAAGAAAGAA AAACATACAATAAATGCCTATAACAAAAATATCAAATGGGGCTTTACAGCAGGTATTTACCAACTATCTGCATCAAAATG TCTCAAGTTTAATTTTTAAATTGTGAATATATATGCCATCCTCTTCTATAGGATTTGTTTGCTGTGGTGTTGAACGTTCG ATTAAACACCTTGCGTCCTTCACCAGCCTTAAGCTATAAATATCAGTGGGCAAAAATCAGAGTTAGCTTCAGCCTCTGCT CTAACCTATGCTATTCATACTCCGTACCTAGGTGATCATTTTGCCTACGTTTCCGACTACACTTCTTACTCACTTTCTCC TCTGGTATTTCTTCAAACTGCTCTGTTAAGCACTTGTGCACAAGGCTCTTCACTTCATCAAGTAAATCTTTGTTATGAGA ATCCAACCCTTCTGTTGAGATTATATCAGCAATGTTTGCAATTTCCCTCATCGCAGTAACCTGTAATAGTATGTGAAAGT CAAGTATTTATTACATGTTCAAGAGAAAGATAAATAATGATAACTAGGCGAAGACATACGGTTCTCTGATACTCAGACTC CAAAGATGATGTGACTCTCACAATGTATTTCCGAGTAATCTTCTGGTACCATTGCATGTACTCACCCTCATCTGAAATTT CACCACCTTCTGCAATATGAAGCCAACGCTCTGACCATTCTTTTAGAGCCATGTCCATTTTCCCCTTCAGGCCTATCCCA TGATCCACTATACGATTCTTCCTTTCCCACCGTTCCACATCTTTCGGGATGTTTTGGTACATGCCAAATTGCCTTAAGCA ACGATCTGGAAGATGCCTTTCTGCCTTGTCAAAACACAATAGCATAGTTCTAGATGCCCGTAAATTCAGACAACTTTTTA TATCTTCTGGTATGGCTGTAAAGTCCATATCCTTGTAAGGAAGCCAGTGAACCTGTGTATTAACACTAAAGCAGATTTAC TATTTTCTCTTGCCTAAAAAAATGTCAATTGAGCAACATTATTAACACTTACATCACAAGATTTAAGAGAATCCAAAGCC TTCCTGTAGGACACTGCATTACATTTTGTCCTAGAACCACTTTTCCCTTTCCATTTAAGCACATAGGGAAAGCAAATGTT ATCAGGTTCTTGATTAAATTTTGGCCGTCCAACATTGAGGCGAGAGTAACTCCAACACTAAAAAAAGACCAACTAATCAG TGAGATTTCAAACTAAAACTATCACCAGTTGAGTGTAGAGACTAGAGGGAAGTAATTTGATAACCTGAACTAGAGTTAAA CAGCCACTAATGGTGCTTTGAGATCTAAGGGATGCATTGCCAAGTGCTCTATATAAAAATGCCAATGCGCCTGCACCCCA AGCAAACTTTCCTGCCCTGTCAAAGTTCTCAAACAAAGAAAGGTACATAACAGGGACTTTGTTCCCAGTTGTTGTTGAAA ATATTGTACTGCCTACCAGGTATAGAAGGTAAGCACGAGTACAGCACTCGGTTTGTTCCGGCGATGCATCTTCAGGACAC TCAGAAAAGAATTCCTTAAGCCAAGTAAGATTCGCCATTCCTCCATTCAAGTCCTCTGGTACTCTCCCTAGTAGTTTTTC ACAAACTGAACCTGGTGCACTTATTGGACCTATCACAGGTTCTCCATCAATAGCCAATCCCAGTAATAGTGCTACATCTT CAAGGGTTATTGTTAATTCTCCAACACTTAAGTCAAAGGTATTTGTTTCTCTCCTCCACCGCTCAACCAAAGCTGCTATG AGTGCATTGTCAAGGCTCATAGCAGGAAGTAGTCGAAGGTAACCAAAACCAGCCTTCTCAACTAACTTAATCTGTATAGG TGTGAGCTTCCACTGATCAAGCAATGAAGTGTGTTCATGGCATCTAAGCACCCCACGCTC 

CDS sequence (LotjaGi3g1v0424000.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGAACCAACAAGTCCAAAACCTGGCCCACCCCAAAAACCTGTCTGATCCATTTCTTAGGGAATGGGTTAAGTCACCAAA AAATCCTCTAATGGCACCAACAATTGCTAACAAGATCAATGCAAGTTCATTCAGAGACCCTACAACTGCTTGGTTAGGCA AAGATGGACATTGGAGACTGCTTGTTGGGAGCAAAAAGAACACTAGGGGGATGGCAATTTTGTATAGGAGCAAAGATTTT GTTAATTGGGTTCGAGCCAAACATCCGTTACATTCCGAAAAAGGAACCGGAATGTGGGAGTGTCCTGATTTTTTTCCGGT TTTGCGTGTCGGCCCGCTAGGTATTGACACGTCTGTGGACGGTGTTCAAGTCAGGCACGTGCTCAAGGTTAGCTTGGATG ATAAGAAACATGATTACTACGTGATTGGGAGTTATGATGCTGAGAAGGATAATTTTGTCCCGGATAATAATAAAGGGTTT GAGGGTGATGTTGGGACGGTTTTGAGATATGATTATGGGAAATACTATGCGTCCAAAACTTTCTTTGATGATGAGAAGAA TAGGAGGGTTTTGCTTGGTTGGGTCAATGAGTCATCTAGTGTTGCTGATGATATCAAGAAAGGGTGGTCTGGAATCCATA CAATTCCAAGAGCTATCTGGCTGCATAAGTCTGGTAAACAGTTGATACAGTGGCCTGTGGTGGAAATTGAAAAGCTACGT GCAAACCCTATCAACTGGCCCACCAAAGTGCTCAAGGGAGGTGACCTACTTCAAATTAATGGTGTAACAGCAGCACAGGC TGATGTTGAAATTTCATTTGAAGTAAAAGAGTTTGGAAAGGCTGAAGTTTTGGAGTCTTGGAAGGACCCACAAATTCTGT GTAGCCGAAAGGGTTCAGCCGTTAGAAGTGGACTGGGACCTTTTGGTCTGCTAGTTTTTGCTTCAAAGGGATTGCAAGAG TATACGGCAGTTTTCTTCAGAATATTTAGATACCATCACAAAAATTTGGTGCTCATGTGCAGTGACCAAAGCAGGTCTTC CCTGAATAAAGAAAATGATAGGACCACTTATGGAACTTTTGTTGATGTGAACATTATTTATGAGAAGCTGTCATTGAGAG CCTTGATTGATCACTCTGTTGTGGAGAGTTTTGGAGGAGAAGGAAAGGCTTGCATCACAGCCAGAGTTTATCCCACATTG GCCATAAATGATAAAGCACAAATTTACGCTTTTAACAATGGAACTGCTGATGTCAAGATCGCGAGATTGAGCGCTTGGAG CATGAAGAAAGCTCAAATAAGCTAA 

Protein sequence (LotjaGi3g1v0424000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MNQQVQNLAHPKNLSDPFLREWVKSPKNPLMAPTIANKINASSFRDPTTAWLGKDGHWRLLVGSKKNTRGMAILYRSKDF VNWVRAKHPLHSEKGTGMWECPDFFPVLRVGPLGIDTSVDGVQVRHVLKVSLDDKKHDYYVIGSYDAEKDNFVPDNNKGF EGDVGTVLRYDYGKYYASKTFFDDEKNRRVLLGWVNESSSVADDIKKGWSGIHTIPRAIWLHKSGKQLIQWPVVEIEKLR ANPINWPTKVLKGGDLLQINGVTAAQADVEISFEVKEFGKAEVLESWKDPQILCSRKGSAVRSGLGPFGLLVFASKGLQE YTAVFFRIFRYHHKNLVLMCSDQSRSSLNKENDRTTYGTFVDVNIIYEKLSLRALIDHSVVESFGGEGKACITARVYPTL AINDKAQIYAFNNGTADVKIARLSAWSMKKAQIS 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
SMART 1 388 388 1.6E-138
CDD 2 221 220 2.71238E-108
PANTHER 2 433 432 1.3E-253
PANTHER 2 433 432 1.3E-253
Gene3D 2 242 241 1.3E-177
Pfam 3 232 230 3.6E-62
SUPERFAMILY 3 233 231 1.17E-55
SUPERFAMILY 232 430 199 2.69E-35
Pfam 235 427 193 4.4E-29
Gene3D 243 429 187 1.3E-177

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Hydrolase activity, hydrolyzing O-glycosyl compounds Catalysis of the hydrolysis of any O-glycosyl bond.
Biological process Carbohydrate metabolic process The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.

Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0424000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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