Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0424100 |
| Transcript ID | LotjaGi3g1v0424100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Metallo-hydrolase/oxidoreductase superfamily protein; TAIR: AT3G13800.1 Metallo-hydrolase/oxidoreductase superfamily protein; Swiss-Prot: sp|O74545|YCV6_SCHPO Putative hydrolase C777.06c; TrEMBL-Plants: tr|G7LHH5|G7LHH5_MEDTR Metallo-hydrolase/oxidoreductase superfamily protein; Found in the gene: LotjaGi3g1v0424100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:83347604..83355604) extracted from Lotus japonicus Gifu genome v1.2.
CTCAAATAATTTTCATCGCCAACGCGTACCAAACAGACACTTGTTTTGCGTTTCAGCTCCTCCTCGTGATTCAGAAAATG TTTGTGTGACTGACATAAGTGTTGTTAACACAGCCACAACCAATGGTGGTTACCTCCAACCCCATTCGTCTTCTTCCTTC TTCCCTCGCCTCTTTGGCTCACCATCACTCCCCATTTTCACGGCGGTGGCGGCGTCCCTCTTCCATCTCACTCCCCGCAG TTTCTCCCATCCACTCCAGTAACTAACTAACCACCATTTCATTTCATCTTTCTGTATCTTGTTAGATTTTCACATTTTGA TTGCTTTGGATTCGAACACGTTGCAATTGCAAATATTGACTGGACTCAAATTTGATTCAATTTCTCTTGGTTTCTGAATT CACTGCAGTTTCTGCCAATGGAGGAGGAGGAGGTGCTGAGATTGATCAAACAGAAATTGTATTCATGGGGACTGGAACTA GTGAAGGGGTTCCGCGAGTTAGCTGCTTGACTAATCCTTTAAGCAAATGTTCGGTATATATGAGTGCTAATTTGATTAGA GAATGGAGTTCAATGTTTAGGGTTTATTGAACTTTTTCATGAGTTTTTTACAGGTCTGTTCGAAAGCGGCGAGACCGGGT GATAAGAATAGGAGACTTAACACCAGCATCCTTATTCGTCACCCTAACCCCTCTGGAACACACAATATTCTTATAGATGC TGGAAAGTATGTTTCAAATTTCCCTATATAATATTTGTTGCAATCTTGTTAGATCAGGAGCTAGGTTTGCCCCAAAATAG GATTTCTTTAAATTTTTTGACTTCTCAAAATTCTGCTGGAACATGGACAAATCAATTGTTAGCAATTGTAGCTTTCGTTC GACATGCTGCTAGTATAATGCATACACTGAAGAAGACCAATGTTTATCCATTCACATTATTTTCACTGTTGTTCATCACA GTTTATGCATTAAAAAAGACCTTCAATGACTTGGTAGCATGCATATGCATGGATATATGCATCTTGATCGTTATAGAATT GTGGATGTAAATGAGTTCTTTTTTCATATTTTTCTTAGTGATCGTCTTTTGTGCCTAATTCATGATATGATATATACTGT GTCAGGAAATAGTGATGTATGAACAATGAATATATTAAGGGTTTTAAAAACTTTTAAAATGGGATTTGAATTCTGTATAA GTAAAACCCATATATGATTGTATATGTCCATTATAACAATTTTTTGTTCTCATTGCAGATTTTTCTATCACAGTGCTCTC CAGTGGTTTCCTGCACTTGGGTTAGCTTACCTGTTTCAATTCTTTAGCTGTTTTTTATGTTATTTGAGGAGATAGCTTCT ACATTATATATATATATATATATATATATATATATATATATATATCAAGGGTTATGAACTGGAAGTACAGTGAAACATTT GATCAGGACATATGTACATCGGGGAAAGATACCAGCTAAATTAATTATGATTATCAAATATTTGCAATGCATTTAGATAC TAGACAATCTAAGAGACAAAAATCTTAGGAGACAACATGTATATCAGTGTCATTTCTTTGGTTTTAAATGTCTTTTCTTG GTGATCTCTTGATCATTGAGCCTTAAATTTATGAAGTAGATGATGTTTATGCTGTGTTTTTCAACTTTGCTTTCTATCTC TCTTTAACTAGTTGTATTTCTGTCAGGATAAGAACACTTGATGCTGTTATTATTACTCATTCACATGCTGATGCAATTGG AGGTCTCTGATTTATTGTTACTACTTTCTAATACTCTTTGGATAATTAATAGCACTAGGACAAGTATAATGCTTGCTTGA AATAATATGAAATCCAACCGGTCATATAGACTAACTTGACTTCTTTCTTCTCCCCAGGTCTTGATGATCTTAGAGATTGG ACGAACAATGTTCAGCCATCTATTCCAATATATGTTGCCAAGCGTGACTTTGAGGTCTCCCCTGCGCTTGCCTTCTAAAA TTCATGTAGTCAATTTTATTTTCTCCTTGTTATCAGTATGAGTACGTTGTAATTAAGGCTGGAAAGGCCTGCTATATATC TATGCACCATATTAAAGAAATTAATGCATTACATGAGAAATTGTGAATTTGTCATATATTGAAAGTTTATGTTGCATTTA CGTCAATTTTTTTAAACCTTAAAAGTTAATACTGAGAGCTACTGATATGTTCATGCTTTCCCTGGGATAACCTGAGGAAG GGATACAACTGATGTTATTCAAGAAAATATTTATGTGCTTCTTAGTGCCATTGGAATTTGGACCTCTGCATTTGCTTCAA TATTTACACTAAAGAAATTCATTATGGATTTGAAAAAGATTTGTATGGTGAATTATAGTTAAAAATTCAAATGATGAAAA GGCGGATTTAATTATACCTGCCCAAACTAACTACAGAAAATAATTTATGCTGAAACTTAAAATATAATAGCCATCTGTAG AAATCAAATCTTCCTCTTGAAAACCAGAGAATCATTTGTCTGAAAATCCTGTCTAATCTCGCCAAATGTAAGATATTTTC TCATTTGCGTGATGGAACAATTTTTTCTCTATGTAAGCTTCTGAAACCATAACTGAGAGGGAAGCTAGCCCCCTTGCACA TTATACTCATGCTTATCTCTAGATAATTTACTCCACTTTTATGATCATTGCCCACTATTTAGATCGCTAGAGTAGAAAAA TGAAGAAATGTTTTAGCTGAAGTTTCTTCTCAAATATTTAACTTTCAGGATGGAGCATAATAAGCTTGATTTCTTAAGCT TTACTTGTCATCAGTTTTAGATATTTATTTTCCCTTGGGCTATCGATTTGGTATTCCTCTTGATAGCACTTGTAGCTATA CCCTGGATGGATAACAGAATGAAAGCTTATGATGATCAGATGATTCATTCATATTTCTTCATTGAGCAGTTTTTTAGATC GGTTCTTCTGTGAATTATTTATGTATTAATTACCGAAATATGCAGGTGATGAAGAAGACCCATTATTATTTAGTAGATAC AAGTGTTGTCTTACCTGGTGCTGCGGTCTCAGACTTGCAATTCAAAATCATATCCGAAGAACCATTTGTAGTACATGGAT TAAAAGTTAGTACTGTTAACATTTTTAATAGTTTGAAGTCGGAGTAGTGTTTAAGTACTTTTTCCTGTTCACTCAATCTA TTTTCTATTGAACAAATCAATTAACTTCTGGCAATGTCCCTTCTTGTGCATTGGGCTTGGCTCTGATTTTTAGTCTTCTG TTGTTATTGTATTTCAGTTTACCCCATTACCAGTTTGGCATGGCAAGGGTTATCGCTCCCTTGGTTTTCGTTTTGGCAAT ATATGCTACATAAGGTAATGTTTCTTACTAAATGGAAACTTTTTCATTATATTGTTATTCAATCCATCTTTTTCATCAAT GTGTTCTGATCTTGTGTCTAAATTTGCAGTGATGTCAGTGAAATTCCTGAAGAAACTTATCCACTTTTAAAGGACTGTGA AATTCTAATCATGGTGACTCACCCTCCCATCCTTTCTATCTTGCTACAAACGTGTCTCATTTTTACATGAAATAACTGGA AGTAGGGTGTAGATGTGTACAATTTCTCTTTCTCTCTTAAAGCTATGATTTTACAGGATGCACTGAGACCCGATCGCTCT ACAGCCACACATTTTGGACTTCCAAGGGTAATCTCCTTCACATTTCTTAATTCTTTTTTTAGAGATATGAAGTTTATTCT GATCTTCCATTTCAGGCCTTAGAGGAAGTGCGAAAAATTCAACCCAAAAGGACACTTTTCACTGGTAAGTTTAGCTTAAG CCTCCTTGTTTAGGATAATGTTTCCTCTACTTTCCTTCCTTTGTTTTTCTTGATGCAACAGTCCACTTCAGTCCATTTAT CAAGTATTTAGTACCTGTTAGGCCCTCAATTAAGAAATTATATCACTGGAGAGGTGAGACGAGGCCCAACAAGAATGGGG CTACATGAGGAACAGCAGAACAGAGTTCATTAGCAGTTAGAGAAGTTGTTAGGGGAGTTGATAGTTAGCCTGTTTAGTTA AAGAACTAAGTTGTGTGGAGGGAAGTGAGAAGAGTGTCCTGTGTCAGATGCTTCTGTGTTGGGACTTGGAAGGTCCAGGC TCTCTAATCTAAGTCCTGGGTATTCTTTCTTGCCATTCATCTCTTGTACCAAGAAGGAAGCTGTAGCCTTAAAGATTCTT TTTCTTCTATCAATTCTTTTTTTCTGCTGTACCAGTTTCCTACCAAAACCATGATAAAGTCTCTCCATAAGTTCATAATT AGTAAAAAAATGCGGGTTGTCAATATTACTTTTTCCATCAATGTAAATTACAACAACGGCTACAAGAACAACCAGTCCTT TTTCCCACTAGCTAGGTTGGGTCCTTTACATGGCAACAACCAACAATAACAATTACTCTAAAACTCTGTCATGTATAGAG TTTAAAGATTGGTCATTTATTTTTGAATCTCTTTTATGATTTGGCCTATAGTGTTTCTTGGTGTCCCTCTACCTCTAGCT ATTGGATCATCGTCTATATGGGCAGACCTTCTAGTTTGGACTTCTATTGGTCTTCTCATTATAAACCAAAACCAAAACCA AAACCACCTCAGACGAGACTTTACCAAAACCTAAACCACCTACTCCAATTTTCTCTCTAGTGACTCTATTCTTAAGCATA TATTGTCTTGGGCATCCATTCATCTATCGTAACATTGTAATTTCTATGACACTGAGTTTACTTTCTTGTTTGCTCTTAAC TGCCCAAAATTTAATTCCATACAGCAATGCAAGTCTTATAGATGTGTGGTAAAGTTACCTCGAACTTGAGTTGAGTGGTA CTTTTCTATCACAAATCACACCGAAAGCATTCCCTCATTTCATCCACCATGCTTGGAGCCTATTGTTAACAATTAACATC CTCTTTATCTCTTCATTTTGATTAATGGACCTAGGGTTCTTCGAATGGGAGACTTGTGGTGGTGAATGTTTTACTATTTT CACCTATAGAGTGGGACTTGTGTGTCTCTTGCTAAACTTACATTCTATATATTCAGTTTTATACATATTTAGGCAAAAGG CTGTGTATTTAAAAGGGCTGTCTCTATATATACCTCCATCAATGTAAAAAATGTTTCAGAAAAGTAATATTGGATGTTTC CTCGTTGGCTTTTTAAAGGTATGATGCATCTGATGGATCATGAAGAAGTAAATAGCTATCTTACAAAACTATTGGAGTCT GAGGGTCTTGATGCACAACTGAGCTATGATGGGCTTCGTATACCAGTTAAACTCTAACTACAGTCTCATTCATAGAGACG ACATTTTTTTTCCTCAAAGAGAAGTTATTAAAATAAACACTCAAATGAATGTCATTACAAGTCTCTTGACAATAAATACA TTCTGCTGGTCTGTGCAGCCATTCTACCTTCTAAGTTCTAACCTATCATCATTCTTCCTTTTCTCTTTCCCCCTGTTAGC GACAAGAAATATTGAGGATACTACCATAAGGATTTTTCTCTGCAATAAAAGTTTTGATTTTTTTAAAACGTGTTACTATA GATAGATTATATAAAAATTAAATTAAATCCATGTTTAAGTACAGATTGTTTAGGAAAGTTGCTATTGATGACATCTTAAG ATTTTAGACTGACTTGTTGAAATGATTTTTACCACAACCAAGCCCGAAACATGGTAGTTGGTACTCCCAAAATTTAGTGG ATGTGCATTTTTAACAAGTAGTATCACATTTGAGGCTTTAAGCGTGATTGAGGATTTATGGTATCATAGTGATTTTAGTG CAAATATTAATTTGTATTAAAACTACAGGTTCATTGTTCAATTGTAAAGCAGTATTTTGTATTTTTTTAGATGAAAGAAT TTTTTTTTTGAAAATTTTAGTTTGAAATGTATGGACAATATTATGCATCATATCGCCAATAATACCAATATATTCCGTGT TTTTTCTCAACATTGTTTAAACACTGATTTTTGGACTGAGAGTTTCTATTGGAAAAGAGCCCTTTCTATTTCCCCTTTGG AGAAGGGAACAAAAAGAGTTTGGACTTTGGACATGCTCAGAGGAGAGCTTATTGGCCACCGGAGAAGTAACTTCCTCAAT GGCAAAAGGAAATTCTTTTTTACAACTCTTGAGTATTGAATATATAAAAATAGTAATATGCATGAATAAAATATAAACAT GAGTATTTATTTTTTATATATCAACTTGATGACCCGAATCAAAGTAAGCAGATTTTAATTTGGATTTCCTGAAAAGAGTT TAAAAAACTGAACAAACCAAACCAAATAATATAATCGGTTCGGATGCTATTTTATTTCAAACTTGAATCAACCCAACTCA CAAATACACCTAGTTAGTTCTAAAATTCTACTAGGTAAATACACTATTTTAATGGGAGGGATGAGCTGGGAGAACATATT GAGACTTGGGTCCCGCAAGATCCCATTTTAAAATCTTAATCATTGAAGAACAAACAAGACCATGACAAAATTAAAATGAT TTTCTATTGCCAAATTTTTAAACATCATTTATGATGCACAGAACACAACCCATGGAAAGTTGAACAAAGAGAAAACAATG AAATTCTGCTAAGTACACACGTATACACACATACTACTACTTTTCATTTATGTTGCTACAATTAAGCACAATAATAAAAC CACAGACAAGTGGAGTACTAATTCACATTAATATTTTATACAGATCTGGCTATAGCCATATGGAGCACCATTGATTAGCT CGAAAATTAGCTACTGATTAGCTAGAATCCCCTCATGATTCATAAACTACAAATCTACAATTCTATGTATGACAAAGAAA GAAGATATAAACATGGTGTGTTTTTCAATTAGTAATACGCAAAAGATGTCCGCTTTAGTCATCCCTACCATAATTCAACC TCTCTCATCCAGATCATTTTTCTCTCTATGATTTTTTCTTGTCACACTAAGGAAAAAGTCATGTTAACATGTACTTAAAA CACATCCACCTTGATCAACTGTGAATAGAAGAGAGATAAATGAATGTTATAATAAGTGGTGTAATAGAAAAAAATATAGT AAAAATATGATGTAAATTAAATTTAAATATGAATGTATTAAATTAAAGCTGCACTCGTAATGTCATAAATCATTTTTTCT CTCATCGTATCTGATTTGTCTGCCTCCTCATGGAGTGTCTATCAATAATTCTCCACATCATAACATAATTAGTAGCATCG TTAATTTTCCACACTGATAAGTGATAATGATCATTATGAAGTGAAAGTGACTGGGGCGACAAAAGTTGTGGCTGTTAAAG ATACGCTGTTAAAGGTTTAGATAGGCAGGCAGCTTTGTCTTAATTTGTAGATCCCTAACCTACCAAGGTCAATTTGTTTA CAATTTAAAACAAAGAACCATGCAAAATTTGTCAGAGTTTCAGCTTTTTTTTTATACTCAATAGTTACAATGATAGTGAA ATGAACGATGATGAAAAGAAAGTATGATTTAAATACAGAGAATATGTGAAAATTAATAAAGCTTTAAGCCATGCTTGTTA GAATTTAATCAATGAATCAATCATGTCACCCTAAAATGAGAAAGTTGAGAAGGGTCTAATAGCCATGATGTTAAATGATA GAATTTGAAGTCTGCCTCCCCCATATATGTACCTCTGCGTCTATCTGTATATACAAATGAGATATCTTCTTCAAAGGCGA GAGAATTACTTTTATAGAGAAAAGTTTTTTTTTTTGAAAGGTTTATAGAGAAAAGTTAATCATTACAATTATTTTTTTAC AAATAAATTGAGTTGTTTTATTAACTTTATACTCATTTACTTTATTCTCTAAAGTAGCTCGAGCAAAAATCCTATATAAA TAATGAGTTTAATTTCTATGCACTGACGGTGTAAAGTTTTTTTACACCGTCAATGAATCAGATTTCTAGGATGTGAGAAA A
CDS sequence (LotjaGi3g1v0424100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTGGTTACCTCCAACCCCATTCGTCTTCTTCCTTCTTCCCTCGCCTCTTTGGCTCACCATCACTCCCCATTTTCACG GCGGTGGCGGCGTCCCTCTTCCATCTCACTCCCCGCAGTTTCTCCCATCCACTCCATTTCTGCCAATGGAGGAGGAGGAG GTGCTGAGATTGATCAAACAGAAATTGTATTCATGGGGACTGGAACTAGTGAAGGGGTTCCGCGAGTTAGCTGCTTGACT AATCCTTTAAGCAAATGTTCGGTCTGTTCGAAAGCGGCGAGACCGGGTGATAAGAATAGGAGACTTAACACCAGCATCCT TATTCGTCACCCTAACCCCTCTGGAACACACAATATTCTTATAGATGCTGGAAAATTTTTCTATCACAGTGCTCTCCAGT GGTTTCCTGCACTTGGGATAAGAACACTTGATGCTGTTATTATTACTCATTCACATGCTGATGCAATTGGAGGTCTTGAT GATCTTAGAGATTGGACGAACAATGTTCAGCCATCTATTCCAATATATGTTGCCAAGCGTGACTTTGAGGTGATGAAGAA GACCCATTATTATTTAGTAGATACAAGTGTTGTCTTACCTGGTGCTGCGGTCTCAGACTTGCAATTCAAAATCATATCCG AAGAACCATTTGTAGTACATGGATTAAAATTTACCCCATTACCAGTTTGGCATGGCAAGGGTTATCGCTCCCTTGGTTTT CGTTTTGGCAATATATGCTACATAAGTGATGTCAGTGAAATTCCTGAAGAAACTTATCCACTTTTAAAGGACTGTGAAAT TCTAATCATGGATGCACTGAGACCCGATCGCTCTACAGCCACACATTTTGGACTTCCAAGGGCCTTAGAGGAAGTGCGAA AAATTCAACCCAAAAGGACACTTTTCACTGGTATGATGCATCTGATGGATCATGAAGAAGTAAATAGCTATCTTACAAAA CTATTGGAGTCTGAGGGTCTTGATGCACAACTGAGCTATGATGGGCTTCGTATACCAGTTAAACTCTAA
Protein sequence (LotjaGi3g1v0424100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVVTSNPIRLLPSSLASLAHHHSPFSRRWRRPSSISLPAVSPIHSISANGGGGGAEIDQTEIVFMGTGTSEGVPRVSCLT NPLSKCSVCSKAARPGDKNRRLNTSILIRHPNPSGTHNILIDAGKFFYHSALQWFPALGIRTLDAVIITHSHADAIGGLD DLRDWTNNVQPSIPIYVAKRDFEVMKKTHYYLVDTSVVLPGAAVSDLQFKIISEEPFVVHGLKFTPLPVWHGKGYRSLGF RFGNICYISDVSEIPEETYPLLKDCEILIMDALRPDRSTATHFGLPRALEEVRKIQPKRTLFTGMMHLMDHEEVNSYLTK LLESEGLDAQLSYDGLRIPVKL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 46 | 342 | 297 | 2.2E-190 | – | |
| PANTHER | 46 | 342 | 297 | 2.2E-190 | – | |
| Gene3D | 56 | 341 | 286 | 8.3E-76 | ||
| CDD | 61 | 272 | 212 | 2.73664E-79 | – | |
| SUPERFAMILY | 61 | 340 | 280 | 2.62E-36 | ||
| SMART | 102 | 305 | 204 | 7.7E-11 | ||
| Pfam | 117 | 303 | 187 | 2.6E-26 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0424100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…