Domain Predictions — View

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PF12706

Source: Pfam

Description

Beta-lactamase superfamily domain

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 21

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0212909.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Hydrolase-like protein [Medicago truncatula] gi\|357447177\|ref\|XP_003593864.1\|	Domains G3DSA:3.60.15.10 IPR001279 PF12706 PTHR12553 PTHR12553:SF7 SSF56281	6
Lj0g3v0261399.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: ribonuclease J-like isoform X1 [Cicer arietinum] gi\|502130444\|ref\|XP_004500652.1\|	Domains G3DSA:1.10.10.60 G3DSA:3.60.15.10 IPR001279 IPR004613 IPR009057 IPR011108 IPR017877 PF07521 PF12706 PF13837 PS50090 PTHR11203 PTHR11203:SF22 SM00849 SSF56281 cd12203 mobidb-lite	17
Lj0g3v0344629.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: nuclear ribonuclease Z-like isoform X2 [Cicer arietinum] gi\|502164752\|ref\|XP_004513246.1\|	Domains G3DSA:3.60.15.10 IPR001279 PF12706 PTHR12553 PTHR12553:SF43 SSF56281	6
Lj2g3v2856020.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Nuclear ribonuclease Z [Medicago truncatula] gi\|357493079\|ref\|XP_003616828.1\|	Domains G3DSA:3.60.15.10 IPR001279 PF12706 PTHR12553 PTHR12553:SF37 SSF56281	6
Lj3g3v0260490.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: zinc phosphodiesterase ELAC protein 2-like [Glycine max] gi\|356557289\|ref\|XP_003546950.1\|	Domains G3DSA:3.60.15.10 IPR001279 IPR013471 MF_01818 PF12706 PTHR12553 PTHR12553:SF49 SSF56281	8
Lj3g3v2691870.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Hydrolase-like protein [Medicago truncatula] gi\|357513653\|ref\|XP_003627115.1\|	Domains G3DSA:3.60.15.10 IPR001279 PF12706 PTHR12553 PTHR12553:SF38 SM00849 SSF56281	7
Lj4g3v2490580.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Hydrolase-like protein [Medicago truncatula] gi\|357447177\|ref\|XP_003593864.1\|	Domains G3DSA:3.60.15.10 IPR001279 NON_CYTOPLASMIC_DOMAIN PF12706 PTHR12553 PTHR12553:SF7 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF56281	11
Lj6g3v1951760.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Hydrolase-like protein [Medicago truncatula] gi\|357447177\|ref\|XP_003593864.1\|	Domains G3DSA:3.60.15.10 IPR001279 PF12706 PTHR12553 PTHR12553:SF7 SSF56281	6
LotjaGi1g1v0068900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Ribonuclease Z family protein; TAIR: AT2G04530.1 Metallo-hydrolase/oxidoreductase superfamily protein; Swiss-Prot: sp\|Q8L633\|RNZC_ARATH Ribonuclease Z, chloroplastic; TrEMBL-Plants: tr\|A0A151U1G9\|A0A151U1G9_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0068900	Domains G3DSA:3.60.15.10 IPR001279 IPR036866 PF12706 PTHR46504 PTHR46504:SF1 SSF56281 cd16272	8
LotjaGi1g1v0237600.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Ribonuclease J; TAIR: AT5G63420.1 RNA-metabolising metallo-beta-lactamase family protein; Swiss-Prot: sp\|P54122\|RNJ_CORGL Ribonuclease J; TrEMBL-Plants: tr\|G7J5I7\|G7J5I7_MEDTR RNA-metabolising metallo-beta-lactamase; Found in the gene: LotjaGi1g1v0237600	Domains G3DSA:1.10.10.60 G3DSA:3.40.50.10710 G3DSA:3.60.15.10 IPR001279 IPR011108 IPR017877 IPR036866 IPR042173 PF07521 PF12706 PF13837 PS50090 PTHR43694 PTHR43694:SF5 SM00849 SSF56281 cd07714 cd12203 mobidb-lite	19
LotjaGi1g1v0237600.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Ribonuclease J; TAIR: AT5G63420.1 RNA-metabolising metallo-beta-lactamase family protein; Swiss-Prot: sp\|P54122\|RNJ_CORGL Ribonuclease J; TrEMBL-Plants: tr\|K7KL53\|K7KL53_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0237600	Domains G3DSA:3.40.50.10710 G3DSA:3.60.15.10 IPR001279 IPR011108 IPR036866 IPR042173 PF07521 PF12706 PTHR43694 PTHR43694:SF5 SM00849 SSF56281 cd07714 mobidb-lite	14
LotjaGi1g1v0237600.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Ribonuclease J; TAIR: AT5G63420.1 RNA-metabolising metallo-beta-lactamase family protein; Swiss-Prot: sp\|P54122\|RNJ_CORGL Ribonuclease J; TrEMBL-Plants: tr\|K7KL53\|K7KL53_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0237600	Domains G3DSA:1.10.10.60 G3DSA:3.40.50.10710 G3DSA:3.60.15.10 IPR001279 IPR011108 IPR017877 IPR036866 IPR042173 PF07521 PF12706 PF13837 PS50090 PTHR43694 PTHR43694:SF5 SM00849 SSF56281 cd07714 cd12203 mobidb-lite	19
LotjaGi2g1v0006000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Ribonuclease Z family protein; TAIR: AT1G74700.1 tRNAse Z1; Swiss-Prot: sp\|Q8LGU7\|RNZN_ARATH Nuclear ribonuclease Z; TrEMBL-Plants: tr\|A0A1J7GWT5\|A0A1J7GWT5_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0006000	Domains G3DSA:3.60.15.10 IPR001279 IPR036866 PF12706 PTHR46504 SSF56281 cd16272 mobidb-lite	8
LotjaGi2g1v0006000.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Ribonuclease Z family protein; TAIR: AT1G74700.1 tRNAse Z1; Swiss-Prot: sp\|Q8LGU7\|RNZN_ARATH Nuclear ribonuclease Z; TrEMBL-Plants: tr\|A0A1J7GWT5\|A0A1J7GWT5_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0006000	Domains G3DSA:3.60.15.10 IPR001279 IPR036866 PF12706 PTHR46504 SSF56281 cd16272 mobidb-lite	8
LotjaGi2g1v0006000.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Ribonuclease Z family protein; TAIR: AT1G74700.1 tRNAse Z1; Swiss-Prot: sp\|Q8LGU7\|RNZN_ARATH Nuclear ribonuclease Z; TrEMBL-Plants: tr\|A0A1J7GWT5\|A0A1J7GWT5_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0006000	Domains G3DSA:3.60.15.10 IPR001279 IPR036866 PF12706 PTHR46504 SSF56281 cd16272	7
LotjaGi2g1v0006000.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Ribonuclease Z family protein; TAIR: AT1G74700.1 tRNAse Z1; Swiss-Prot: sp\|Q8LGU7\|RNZN_ARATH Nuclear ribonuclease Z; TrEMBL-Plants: tr\|I1ND53\|I1ND53_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0006000	Domains G3DSA:3.60.15.10 IPR001279 IPR036866 PF12706 PTHR46504 SSF56281 cd16272	7
LotjaGi3g1v0424100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Metallo-hydrolase/oxidoreductase superfamily protein; TAIR: AT3G13800.1 Metallo-hydrolase/oxidoreductase superfamily protein; Swiss-Prot: sp\|O74545\|YCV6_SCHPO Putative hydrolase C777.06c; TrEMBL-Plants: tr\|G7LHH5\|G7LHH5_MEDTR Metallo-hydrolase/oxidoreductase superfamily protein; Found in the gene: LotjaGi3g1v0424100	Domains G3DSA:3.60.15.10 IPR001279 IPR036866 PF12706 PTHR42663 PTHR42663:SF3 SM00849 SSF56281 cd16279	9
LotjaGi4g1v0362000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Metallo-hydrolase/oxidoreductase superfamily protein; TAIR: AT1G30300.1 Metallo-hydrolase/oxidoreductase superfamily protein; Swiss-Prot: sp\|O74545\|YCV6_SCHPO Putative hydrolase C777.06c; TrEMBL-Plants: tr\|I1K3H5\|I1K3H5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0362000	Domains G3DSA:3.60.15.10 IPR001279 IPR036866 NON_CYTOPLASMIC_DOMAIN PF12706 PTHR42663 PTHR42663:SF9 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF56281 cd16279	13
LotjaGi4g1v0362000.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Metallo-hydrolase/oxidoreductase superfamily protein; TAIR: AT1G30300.1 Metallo-hydrolase/oxidoreductase superfamily protein; Swiss-Prot: sp\|O74545\|YCV6_SCHPO Putative hydrolase C777.06c; TrEMBL-Plants: tr\|I1K3H5\|I1K3H5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0362000	Domains G3DSA:3.60.15.10 IPR001279 IPR036866 NON_CYTOPLASMIC_DOMAIN PF12706 PTHR42663 PTHR42663:SF9 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF56281 cd16279	13
LotjaGi6g1v0313500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Metallo-hydrolase/oxidoreductase superfamily protein; TAIR: AT1G30300.1 Metallo-hydrolase/oxidoreductase superfamily protein; Swiss-Prot: sp\|O74545\|YCV6_SCHPO Putative hydrolase C777.06c; TrEMBL-Plants: tr\|G7IP30\|G7IP30_MEDTR Metallo-hydrolase/oxidoreductase superfamily protein; Found in the gene: LotjaGi6g1v0313500	Domains G3DSA:3.60.15.10 IPR001279 IPR036866 PF12706 PTHR42663 PTHR42663:SF9 SSF56281 cd16279	8
LotjaGi6g1v0313500.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Metallo-hydrolase/oxidoreductase superfamily protein; TAIR: AT1G30300.1 Metallo-hydrolase/oxidoreductase superfamily protein; Swiss-Prot: sp\|O74545\|YCV6_SCHPO Putative hydrolase C777.06c; TrEMBL-Plants: tr\|G7IP30\|G7IP30_MEDTR Metallo-hydrolase/oxidoreductase superfamily protein; Found in the gene: LotjaGi6g1v0313500	Domains G3DSA:3.60.15.10 IPR001279 IPR036866 PF12706 PTHR42663 PTHR42663:SF9 SSF56281	7

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
SSF56281	SUPERFAMILY	1	4.76