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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0425000 |
| Transcript ID | LotjaGi3g1v0425000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Chaperonin-60 kDa protein; TAIR: AT3G13860.1 heat shock protein 60-3A; Swiss-Prot: sp|Q93ZM7|CH60C_ARATH Chaperonin CPN60-like 2, mitochondrial; TrEMBL-Plants: tr|A0A1J7HWB3|A0A1J7HWB3_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0425000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:83429299..83436406) extracted from Lotus japonicus Gifu genome v1.2.
CCGGACCCAGAAAACAAAACCCGAAATCTTAAACCGTTAAACCCTCCCGAATTCTCTGTAAAACCTTGTGTTTCTTTCTG ATCTCTGACTTCACCACTCTCCCTGAGTTGCCAATTCACTTCAATTCAATGTATCGATTGGCAGCTAAACTAGCTTCTTC CACCTTAAAGAACAACAACCCCGTAAGACCAACACCACTCATGTTTCAATCTCACTTTCTTCTTATGTTCCTGCACCTGG ATAACTCACCATGTTCCTGTTTCACTGTTACTACTTTTTGAAACACATTCAATTGACATTGTTTTGTTTGTAATATGGTT TCTTAGTTTGGTCTGTGGTTTCATCATTTTATTTTGATTTGATTTTTTATTTCTTGAAATGTGGGGCAGGTGTATAGGGG GGTGTTGTCAAGAAGAAATTATGTGGCCAAAGATATCAGCTTCGGGGTCGGGGCTCGTGCTGCTATATTGCAGGGTGTCT CTGAAGTTGCTGAGGCTGTCAAAGTTACCATGGGACCCAAGGTGTGATTTCTTATACATGCTTGTTGCAGCAAGTGGTAC CTTATGGTAGTGTTTGATAGTCAGGGTAGGGTAGGACTTGGATAGAACACAACATATGGGTTTTGTTCTATATTTAAGTT CATAATTTCATATTAAAAAAAGAACTAGAATAGAACAAGACATAATGTAAAAATAATATTATTAATGAAGTGTACATTTT AGTTTCATTGAAAATGTAGAATTAAATTGTGTGTTGATGGACCTATGGAACTTAGTATCATTTATTGTTCTAAATTGTTC ATTTTTGTTCCTAAGGGTTGTAATGCATTTTGGATGAGAGGTGTTGTTTACTGGAAAAATTGACATGGAAAGTAACTTTT TCCCCCATGTATTTGAATTGGTTGAGTCAGGGTCGCAATGTGATAATTGAGAAAAGCCACAGGAATCCGAGGGTCACGAA GGATGGCGTGACTGTAGCCAAAAGTATCAGCTTTGAAGATAAAGCTAAAAATATTGGTGCTGGTCTCGTCAAGCAGGTGG CGAAGGCTACCAACACTGCTGCTGGAGACGGTGATTACTTTTCTTTGAATTTTTTTATTTTTTACCTCAAAAGTGTTGGA TGAGAGTTTATTGGGAATTTTCTTAGATAATAATGCTTCAGCATAAGTCCTACAAGCAGCTTTTTGGACACCAAAAACCA GGAAAATTTTCAAATGTTGGGGCAATTGATAGATAGTTGTTTCTGAAGTAGTTAGTAGTCGTTGACGCAGTCCTTCAGGA TGATGTTTCATACAACACATTTGGTATCTAATTTGCTTAAGTAATCTGAAATAACTAATGTTGCAGAAGGAACACACACA CACACACACATATATACAAAGAAGTAGATTATGTCCAATGGTGGCTATCATACTTGATTTTACACAAATTATCTGATATT TAGAAACATTTGAAAATAATCTCTTTTAAAAACTTCCACCTATCCGATGCTGACCTCATCTAGCCATTGTCGATTCCCCT TCTTGTTGGCTCTTTTATTCCCTTCAGATCTTACAAGTCTATGTTTCTTCTCTGATTTTAGGTACAACTTGTGCAACTGT TTTGACTCAGGCAATACTCACAGAAGGTTGCAAATCTGTTGCTGCTGGAGTAAATGTCATGGATTTGCGTAATGGAATAA ATAAGGCAGTTGCTGCTGTAATTACTGATTTAAAAAGCAGAGCAGTAATGATAAGCACACCTGAAGAGATAACCCAGGTG AAAGAATTCTCAAAAAAACATTCCCTCAGCTGAATGACTTTTAAGAATTTGATTACACTAGAATGCTTCTTTACTCCCCT CCTATAATTAATTTTAGTTCTGCAGCTCTTGAATAATTTTGGCATTTACAAATTGCAATTGATTTGCGCAATCAGTGTGT GTGTGTGTGTAAATAAAAATCAGGTTGTATGGCTACTTGTCTTCCTGATATATGTTTAGTGCCACACATTATACTGGGTT GTATTCTGATTGTTTGTTATTCATTTCCCTTATATGACTGGTAGGTTGGAACCATATCTGCTAATGGGGAGCGTGAAATT GGAGAATTGATAGCAAGAGCAATGGAGAAAGTCGGGAAGGAAGGAATAATCACTGTTGCTGTAAGCAACTTTGTCTTTGT TTGTGAACTTATGACTAAACCTCTGCCCAGGTTGTCTAAAATTTTAAAGCTTTCAGGACGGAAATACGTTTGAGAACGAG TTGGAAGTGGTAGAAGGAATGAAGCTAGCTAGAGGCTACATATCTCCTTATTTTATTACTGATCAGAAGACCCAGAAATG TGTAAGCACAGACTTATTCTTTTGTCACTAACATATGTCAAACCTTCTTAAAAAATTGCAATAGCATGTTGTCTTGTGAT AAATTTAGATTAACTATTTAAGATGGTAGATTTACGGGCAGTTTTCTTTTGTTTATTTTTAATATGCATTGCATAGTCTC CTTCCTCTGCTGTGAAGTTAATGCTTCTAGAAAGCCGTATTGTTAGATGGTTAAACCATCTTACTATCATCATGTGGTCA TGTTTTAGAGACATAGAATTTTGGCTCATTAACCTGAAGCCTATAATATTTTTTCAATATCTTAGTAATGATTTTTTGTT GATATTTGTTCTTCATAGCTTCATTCTAAGCCATAGAATCGATTAGTTAAATTTATTAGCTTCGGTTCATTCAGTTGTGT ACGATGCACATCATAAAAACATAAAATTCATTCAATTTAGTTAATTTACTTGGTTCATTTGTATTTGTGATATTAATGAC TGAAATTCCCTTTTTTGCTAGGAATTGGAGAACCCCTTTATCCTCATCCATGACAAGAAAATTTCAGACATAAATTCACT GTTGAAAATATTGGAGCTGGCAGTCACGGTGGATAAGCCAATCTTGATTCATTGTGCTCATTTTCAATTGTAATTTAAAT ATTCTCATCATTTACTTTTCTATTTTAACGTTGACCAGAAAAAAAGACCACTCCTAGTTGTTGCGGAAGATGTTGAAAGT GATGCATTGGCTATGCTCATACTCAACAAGCATCATGCTGGGCTTAAGGTGATTATGTGACATTTATCTTGGTTTTAATT CCTGCTACCTTATGGTTCAGTAACCTTGAATGCTGGATTCACGCCTTTCTGATTTAAGATTTGTTTCATCGCAGTAACTA ATAATCATTGACTTCTAGTTGGTGATCTTTTATGCTACTGCCTACAACTTGGATTTTGCTTTCTTGAGTTGCTTTCCTGC CTTTCTGTTTTCCTTGCTTTCATTTTGTGCTGGGTTTTACATGAGCATAAGTAGGCAGAAGTAAGATGAACCACATAATA ATAAACACTGATGAGAGAGTAACTGTAATTTCCAATTTAAACAATTTAAAGCCAATGCCAACTACAGGTAATATAAGGGA AGTAGTTTGAACTGTGTGTCTGTTTACTGTCATCATCTTACTTTATATCTGAGCATACTTGACAAGTATTCCAAGTTTGT TAGAGAGCCCCAAATATTGATAGTTAGTTACAAACAAGGCTGTTAAGTATATCAATAGCTAGTTAGAACAATTAGTTAGT TAATTAGAGAGGTCTGGAGGATGGGGGTGGTTTAACTTGAATAGGAGTTAAGGTGGTAGAGAAAGCGGGATTCAGATTTT TAGAGCAGTGGCTCCGATGTAGAAAGGGAAAGTAAACCCTTGAAGGAGAGATTTCTCTCCTTTTTCACTTTTCATTCAGC AATAGATTTTTTCTTGTTCATTTTATTTTCCATTGCATTCTTCAATTCTGGTTTGTCGGTTCCTATCAAAATCTCAATTA CATTCAAGATTTCATTTAGTTAGGTTTGAGATATATTGTTGAAAAACTTTTAGGAATTTCAAGTTAAATATGTTTTATAT AATATTATACACACAAGCAAGTGGATAATATTACTTAAGCTGTTCATAATACTGAAATATTTTATGTATAATTTAGCAAC TTTAGAAGAATTTAGGATAGTATAGGTGGACTTTGTGGTAGTACCTTTTTAGTGGTACAGATTTGTTCTTTTCTAGTTTA TGTTTTGTTTTAGGTGAATTGTATTTATGTTCTGTAAGAACTAAGAAGTATTATGTGCTTGTCCTTTATCTTGTTGTGCT ACTTGAAACTTGATTTTGTATATCCTTGTTTTCTACTTTCTGTATTTTAAGTTTCTTGTATTTTCCAGGTTTGTGCCATA AAAGCTCCTGGCTTTGGGGATAGCAGAAAAGCAAATTTAGATGACCTTGCAATTCTTACTGGAGGAGAGGTGATTCTCTA CCCACATTTTACTTATCAACTATTGCATTTATGTTCTTGTTGTGGTTGTGCTTTTATTATTTAAAAAAATTTAAGCAAAG ACTTATTCACACTTGGTTTAGCGATTGGTACTACAGCTTGTTATGATCAAAAAGATGATTGATGAATTTGAAAACAGGTC ATCACGGAAGATCGCGGTTTTACTCTTGACAAAGTCCAACCAGAATTGCTTGGCACTGCAAAAAAGGTATGTGGCTTTAA GTAGCCTATAGTTCTTCAAACTGTTACATATGCATCTAACTTAATAATCAACAGGTTACTGTCTCCATCGATGACACTAT CATTCTACATGGTGGTGGGGATAAGAAGCTCATTGAAGAGAGATGCGAGGAGGTATCTTTCTCTACTTTTTTTAAAATAT TGTAATTTACGTGCAATTTTTTTTTAGGTTTTATTCATTTAACTGAATGATATTTATAGGTTCCTGTTACTTGCATAATT TTTGTAATGGAAAGAATTGCTGGGTTCTTACTTAGGCCTTTGATAGCTGGTGATTAATAAAAAGGGCTTACTCTTCGTAG TTGAAAAAATAGATAGAGCCTATTTGGATACATACTTATTTGGCAATAAGTGCTCTTTGGTTTGCATCCAAACTGGTACA TAGTCAAGAAGGGATAATCCCCCACTCAACTGATTGTAATATTTAGAGTAAGTTAAGATTTTTGTTATAGAGAAGAGGGC AAGGAACCAGATTAGGGAAGGTCTGGGTTCACGAGGAAGTAGGGTTAAGGGTCTCTCAAATGCAGAGTCAGTTTGCGTAA GCATCATCTTCTACCTCTGAATCATTGAAATCAGAGGGAAGTCTAAGGAATGATACACCAATACACCATATTCCGCAATT CTCCCATTTTTATTCTATTTCTGATCCAGTTCTACGAGCCTTTCTACATATGCATTTGGAGCCTTTTTTTTTTGTCTTCG TAATCCTATTCCATCTACATGCAGTACTACATGACAAAAGTGTCTTGTTGTGATTTATTTTCTTTTGGATCTCACAAACA ATATATTATATGATTGGTGGGTTCATTCCCTGAAGTGTTTGTCGTACAAGTTTCTGTTTTGCAATCATGTGCATCAAGTG ATGTCGATTGAGCACCTTAGGATCATTATTGTACATAACATTGTAACTTCATTTTAAAAGTTGACAGACCATAAACAGTT TAACCTGACTCAGTTTAGATTGCCTCCATGTGGCTTGTATGGACATAAGTAGTTCAATCAGTACAAACTTTTTTTGGGCA CTTTTCTGATGTTGAATAAGCATATATCAATTTGCAGCTTAGGACAGCTATGGACAAGAGTTCTGCGACGTTTGATAAAG AAAAAGCACAAGAACGACTTTCAAAACTCTCTGGTGGTGTTGCTGTTTTCAAAGTTAGTCCTTCATCCTAAGTGACACCA GTTTGTGATATTTAATTTGTATTCATGACCTCACATGGAAGATGGAACCAAACATCTACAGGTTGGGGGGGCTAGTGAGT CAGAAGTCGGGGAAAGGAAAGATAGAGTGACAGATGCGTTAAATGCCACAAGAGCAGCGGTAGAGGAGGGTATTGTTCCA GGTAACTCATTTTGTCCTTTCTGATGGGATAAAAGGTATGCGGTGGGGGGCATACCTTTGTATTCTTGTCCACATTATTA GAATATCACCAATTAAAGTCGCTACATAATTGTTTTACTCATTACTCAGGTGGTGGAGTCGCTCTCTTATATGCTACCAA AGTCTTGGAGAACCTTGAAACTAAAAACGAGGATGAGAAAAGAGGAGTACAGATTATTCAGAACGCACTTAAGGTTGTAC CACTTGCTGCAAACTACTTTACTTTTTGTCACATAAAGGCCTCTCTTCCTTCTCTATTTTGACTTGTTTACTTGCTTGCC AATTTTTCATAGGCTCCTACAGTCACAATAGCTGCAAATGCTGGTTTTGATGGTTCTTTAGTTCAAAACAAATTGTTGGA ACAGGATGATCATAATTTGGGTTTTGATGCTGCTAAAGGTTTGTAACCATTTTACATACTTAAAATTACACTGGACTATC ATCATAAAATGTTTTTAAGTTATCTTTTTTATGCTTAAAGCAAAAAGAATGATGGTGCTTGTTTTGTTAAAGCAGGAACC TATGTTGATATGGTGAAGGCTGGAATTATAGATCCTCTGAAAGTTGTTAGAACAGCTCTGGTAGATGCTGCCAGGTAAAA ATCGTATTATGGCATTCCAATTTCTCTGCATGGATTTTGTATTATATGTTGAACTATTTTTTGTCCTCGTTCAGTGTGTC ATTGCTACTTACGACCATGGAGGCAGCTGTGGTGGAGAACCCGAATAACAAAAATAAATCGCCAAGCCCGGTAGCGGATA TGGATGATTTGGACTATTAACCTGCTTTACCAAATGATGAAAGCAATTTTGTGTATCAATATTAGAGTCTTTTATCATTT CTTTTAAGTGGCCATGGTTGAAATTATGAAACCTACTATGTCTCATTCTAGTTATCATCTTCAATTGGATAAAGATGATA ACTTGCCCCATTCTTTAGGTATCATTCATCATCCCATGTAGCTTGTATCAAAATTCATGTAACAAGGTACAAAATTAAAA AAAAATGTTTCTAACCCCGGTTTTTTTCTGCTACGATTTAGTCACCAAATGTCCAAATTACATTTCCAGTTTCGTTCTTG TTTTTATCATTCAATTAGTTACTACTTGCTTTTGTTTTTCAAATTAGTTATACTTGCTTCAATAGCCA
CDS sequence (LotjaGi3g1v0425000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTATCGATTGGCAGCTAAACTAGCTTCTTCCACCTTAAAGAACAACAACCCCGTGTATAGGGGGGTGTTGTCAAGAAG AAATTATGTGGCCAAAGATATCAGCTTCGGGGTCGGGGCTCGTGCTGCTATATTGCAGGGTGTCTCTGAAGTTGCTGAGG CTGTCAAAGTTACCATGGGACCCAAGGGTCGCAATGTGATAATTGAGAAAAGCCACAGGAATCCGAGGGTCACGAAGGAT GGCGTGACTGTAGCCAAAAGTATCAGCTTTGAAGATAAAGCTAAAAATATTGGTGCTGGTCTCGTCAAGCAGGTGGCGAA GGCTACCAACACTGCTGCTGGAGACGGTACAACTTGTGCAACTGTTTTGACTCAGGCAATACTCACAGAAGGTTGCAAAT CTGTTGCTGCTGGAGTAAATGTCATGGATTTGCGTAATGGAATAAATAAGGCAGTTGCTGCTGTAATTACTGATTTAAAA AGCAGAGCAGTAATGATAAGCACACCTGAAGAGATAACCCAGGTTGGAACCATATCTGCTAATGGGGAGCGTGAAATTGG AGAATTGATAGCAAGAGCAATGGAGAAAGTCGGGAAGGAAGGAATAATCACTGTTGCTGACGGAAATACGTTTGAGAACG AGTTGGAAGTGGTAGAAGGAATGAAGCTAGCTAGAGGCTACATATCTCCTTATTTTATTACTGATCAGAAGACCCAGAAA TGTGAATTGGAGAACCCCTTTATCCTCATCCATGACAAGAAAATTTCAGACATAAATTCACTGTTGAAAATATTGGAGCT GGCAGTCACGAAAAAAAGACCACTCCTAGTTGTTGCGGAAGATGTTGAAAGTGATGCATTGGCTATGCTCATACTCAACA AGCATCATGCTGGGCTTAAGGTTTGTGCCATAAAAGCTCCTGGCTTTGGGGATAGCAGAAAAGCAAATTTAGATGACCTT GCAATTCTTACTGGAGGAGAGGTCATCACGGAAGATCGCGGTTTTACTCTTGACAAAGTCCAACCAGAATTGCTTGGCAC TGCAAAAAAGGTTACTGTCTCCATCGATGACACTATCATTCTACATGGTGGTGGGGATAAGAAGCTCATTGAAGAGAGAT GCGAGGAGCTTAGGACAGCTATGGACAAGAGTTCTGCGACGTTTGATAAAGAAAAAGCACAAGAACGACTTTCAAAACTC TCTGGTGGTGTTGCTGTTTTCAAAGTTGGGGGGGCTAGTGAGTCAGAAGTCGGGGAAAGGAAAGATAGAGTGACAGATGC GTTAAATGCCACAAGAGCAGCGGTAGAGGAGGGTATTGTTCCAGGTGGTGGAGTCGCTCTCTTATATGCTACCAAAGTCT TGGAGAACCTTGAAACTAAAAACGAGGATGAGAAAAGAGGAGTACAGATTATTCAGAACGCACTTAAGGCTCCTACAGTC ACAATAGCTGCAAATGCTGGTTTTGATGGTTCTTTAGTTCAAAACAAATTGTTGGAACAGGATGATCATAATTTGGGTTT TGATGCTGCTAAAGGAACCTATGTTGATATGGTGAAGGCTGGAATTATAGATCCTCTGAAAGTTGTTAGAACAGCTCTGG TAGATGCTGCCAGTGTGTCATTGCTACTTACGACCATGGAGGCAGCTGTGGTGGAGAACCCGAATAACAAAAATAAATCG CCAAGCCCGGTAGCGGATATGGATGATTTGGACTATTAA
Protein sequence (LotjaGi3g1v0425000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MYRLAAKLASSTLKNNNPVYRGVLSRRNYVAKDISFGVGARAAILQGVSEVAEAVKVTMGPKGRNVIIEKSHRNPRVTKD GVTVAKSISFEDKAKNIGAGLVKQVAKATNTAAGDGTTCATVLTQAILTEGCKSVAAGVNVMDLRNGINKAVAAVITDLK SRAVMISTPEEITQVGTISANGEREIGELIARAMEKVGKEGIITVADGNTFENELEVVEGMKLARGYISPYFITDQKTQK CELENPFILIHDKKISDINSLLKILELAVTKKRPLLVVAEDVESDALAMLILNKHHAGLKVCAIKAPGFGDSRKANLDDL AILTGGEVITEDRGFTLDKVQPELLGTAKKVTVSIDDTIILHGGGDKKLIEERCEELRTAMDKSSATFDKEKAQERLSKL SGGVAVFKVGGASESEVGERKDRVTDALNATRAAVEEGIVPGGGVALLYATKVLENLETKNEDEKRGVQIIQNALKAPTV TIAANAGFDGSLVQNKLLEQDDHNLGFDAAKGTYVDMVKAGIIDPLKVVRTALVDAASVSLLLTTMEAAVVENPNNKNKS PSPVADMDDLDY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 15 | 571 | 557 | 0.0 | – | |
| PANTHER | 15 | 571 | 557 | 0.0 | – | |
| Hamap | 30 | 570 | 541 | 35.163 | ||
| TIGRFAM | 31 | 555 | 525 | 1.7E-211 | ||
| CDD | 32 | 552 | 521 | 0.0 | ||
| SUPERFAMILY | 35 | 550 | 516 | 3.13E-70 | ||
| Gene3D | 36 | 550 | 515 | 2.3E-220 | ||
| Pfam | 51 | 550 | 500 | 1.3E-84 | ||
| PRINTS | 55 | 81 | 27 | 4.7E-66 | ||
| PRINTS | 111 | 138 | 28 | 4.7E-66 | ||
| Gene3D | 165 | 438 | 274 | 2.3E-220 | ||
| SUPERFAMILY | 166 | 232 | 67 | 1.17E-21 | ||
| SUPERFAMILY | 212 | 404 | 193 | 8.2E-73 | ||
| Gene3D | 220 | 401 | 182 | 2.3E-220 | ||
| PRINTS | 296 | 319 | 24 | 4.7E-66 | ||
| PRINTS | 378 | 403 | 26 | 4.7E-66 | ||
| PRINTS | 426 | 447 | 22 | 4.7E-66 | ||
| ProSitePatterns | 433 | 444 | 12 | - | ||
| Coils | 454 | 474 | 21 | - | – | |
| MobiDBLite | 553 | 572 | 20 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein folding | The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure. | ||
| Biological process | Protein refolding | The process carried out by a cell that restores the biological activity of an unfolded or misfolded protein, using helper proteins such as chaperones. |
Expression pattern of LotjaGi3g1v0425000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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