Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

LotjaGi3g1v0433300.1

Overview

Field Value
Gene ID LotjaGi3g1v0433300
Transcript ID LotjaGi3g1v0433300.1
Lotus japonicus genome version Gifu v1.2
Description Dihydroflavonol 4-reductase-like protein; TAIR: AT2G45400.1 NAD(P)-binding Rossmann-fold superfamily protein; Swiss-Prot: sp|O22133|BEN1_ARATH Protein BRI1-5 ENHANCED 1; TrEMBL-Plants: tr|G7JDF6|G7JDF6_MEDTR Dihydroflavonol 4-reductase-like protein; Found in the gene: LotjaGi3g1v0433300
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:84494821..84498907) extracted from Lotus japonicus Gifu genome v1.2.

ATTTGAGTGAACTCTATAAATATTTCCCCTTATGACAAGGCAGGGAGAGCTGAGACAGAGAGGAAGAGAGACATGGAAGA TGATAAAGGTACAGTTTGTGTAACAGGTGCAACAGGGTATGTAGCATCATGGCTAATTATGAGGCTTCTTCAACATGGTT ACTCTGTCCGAGCCACCGTTAGATCTCACCATGCTGCAGGTACATATATATACGTTTTAGATTGAAAACTAGCTATATGC AGGGCAACTTATCACACTGAGTCAGTGTTGTTTTGTGTTTGGGGTGTGAGGTGAGTGGAGCTGTGCTGTGTTGCACTTTT CTAGGGGATCAATAGGGTGTTTGTTGAGGGTTGATTTAGAGGCCGTATCCTTTTTTCGATTTAGGTGTTGCATACTTGCA TTTGACAAGGGATGTTCCTCCTGACTTCCTGTTATTCTGTGGGGTGTCTTCTTTTTGTCATTTGTGAGGTGCATAAAATG TTGTTTAAAAAAAACATGCATAAATATCATTAGTTATTCAGATTATACTAGTCTTGGCTAAAATTTGATGCTTCATGCCT TTGCTTACAATTTAGATTTAAGAGATTAAAACTATGTTGCTAACACCAAAATTTGGATAAAGAACAGGAATTTCATTATT CTACAAACTAGAGATCTTGATGCTTAATTAGCTCACAGTTGATTACCAAGCTCAAGGTTTTCAAGTGTAATTGTATTAAT AGGAGTAATTGCATTCACCTCCCATGATGTTTCTCATTATTGCACAGATTTCTTCTTTACTTTGCAAAATGTATTGACCC TCTTTCATATATATCATCTAAAAAAAGACAGAGGGGTGTTAAGTGTTAAAATGTGAAATTTTAGGGAAGGTTGATGCAAT GATAATAAATATCAGGGGAGAGTAATAGGGGGAGGTCAGTGCAACAATGGTAAATCTCAGTAAGTTATTGCAATTTCCCC TTTGTAATAACTATTTAGAAGTGAGTGTGGTCCAAAAACCATGAATCGGTTCAAATTCCAATACTCACACTTATAAACCA TATCCTTGCTATTGAACTCACCTATGTGAGACTTCTTTCAACTTTCATCAACTACATATAAAAGCTAGGATCTTACTAGC ATACGCTCTAATATGTATATGATACATGTATCAGAGAACAAGAAAGACCTCAGCTATCTAACAAACTTACCGGAAGCATC AAAGAGGCTTCGAATCTTCCATGCTGACCTCAACCAAGCAGGTAGTTTTGACAATGCTATTCAAGGGTGCGCGGGAGTGT TCCACCTCGCGCACCCAATGGACGTGCAAGGCCAAGAGCCTGAAGAAGCGGTCACAAAACGTGCTGTGGAAGGAACTCTA GGAATTTTGAAGGCGTGTCTGGAGTCAAAGACAGTGAAGCGAGTGATTTACACTTCTAGTGCCGTAACGGCCCTGTTCAA TGGAAATTTAAATATTAATGGTGATCAAAACTTGGTGGTGGATGAAGATTCATGGAGCGATTTAGAAATTTGCCGAAGTT GGAAGCTTGTGAGCTCTTCGTACTTGGTCTCCAAAACTTTAACTGAGAAGGCTTTCTTGGAGTTTGGAGAACATAATGGA TTGGAGGTGGTCAGCTTGGTTCTTCCTTTGGTTGTAGGACCTTTTGTTTGTCCCAAAATACCATCATCTGTCTATATAGC ACTTGCCATGATCATCGGTACGCATTTTAACGTCTGCAATTTTTATGATAAAAGTTAGTTAAATCACTTTATAATTTTAT GATAAGTGGATTAGAATTTTCATATCTTATTTATTAATTAATTTATAATATAATCAGAGTTGGTTCATTAGGATAAGGTA AATTAACCCTCGTCATTTAGACAATCTCATCGTTAAAGTAACCCTCGTCATTTTAGTAATCACATTTTATGTTGGAGCCT TGGAGGTGATTAATCAGGCAGTCATTTCATAGGGAAAAAAAACCTAGGAAAAAAACATAAAATGTGATTTCTAGGTCATT TTAAAATACTGAAATAAAAAAGTTAGTTGCCGTAAAATTACTGGAATAAATCCGGTAAATTAACAAGTTTGAGAAAAGGA CTACTCTACCTTCTTTGTGTTGCTCACCCACGTTTTAAGGAACCAATTAACGTACAATATGCACTTCATATCTGTATAAG TGTATATCACTGTTATAAATTCATCTCTGCATCGATCGGAATTTTGGGGATTTTCAAATTGAAACAAAAGGCCAAAATAA AAGTATCCTTGTCTTATATAATCTGAGACTTGAATTAATTAAGTTGAAGTATATATAACACTTTAATTCTGATTAAATCA AACTTTTTCTCTTAATATATTTTAGGCGTTCTTGTTAATTTTTGTTCACAGTGCACTCTTGTTAATTTAGGAGACGAGAG TCGATACGATTATCTCACCAACTCATACATGGTGCACATAGATGATGCCACCAGTGCTCTTATATTTCTTTTTAATCATG GTAATGCTAATGGAAGGTATATTTGTTCCTCAACCCAAATATCATTTTACCAAATGTATGAATTTCTTCGTGGAAGATAT CCAGGGCATCACATAACAATTCCAAAGTAAGTTTAATTTTATTTATTTTTTCGTTTTTAATTACATCTTTAATGGCTTTT GTGTATCTAACCTTTTAATAATTATTTTGCTATAACACAAGGGAGATGACAATTGCAAATAGTGATCGAAAGTTCAGTGT TCTATCATCAACAAAGCTCTTGAATACTGGGTTCAAGTTTGAGCATGGCATCAATGAAATGTATGATGGAGCTGTACAGT GCTGCAAAGAGAAGGGCTTTCTTTAGTTCGTCTAGGAACTAAACAAGAAGATATGCAATAATGTATTTAGAACATTATAG TTGATAATAATAGCTAGCTAGTTACTTAGGATATTTATTTTATTATGTTGAGGTTAAAATCATATTTAATTCTTTATTTT TTAATTAAAAAGTGATTTTTTTTTAAAATAAGCTAAAACAAACATCTAAAAACTTTAGACAATTTATTTTTAAATTAAAA AGTTATTTTTCCAAAAATAATATGAAACAAACACACTCTCAAATAACTTTTTCAAATAATCTATCTTCAATTTTTTTATT TCACTTCACACTTTTTTCACTAAAATTTGAAAACACTTTCTCTTATACAATTACAACTTATAGAAAAGTGGCGTATTATA GTACGCATCTTCAAATTCGAGTTCCAAAGTATAAGTAACTTGAATGCTTGTCATATTTCATTGAGAACCTATATGCTTGT ACCTATACCCACTAGCTTTGAGCACTACTCCCTTGCTTCCGGTCCTGGGGAAAAAATGTGAAAAGATGCCCAAAAAAATA TGTTTTTAAGCCCTTAGGTAGCTTACTTCAAGGCAAGGAAATGCATTATCGCTTAGCAAGAATCAACTTTAAAAAAATCT TTTCCAAACACCCTCAAATTTGTTTAGCAAAAATTACTTGAATAAGCTAATTTCTTCCGGTTTAGGTTCTTGTTTTAGCT TTGAATGTCTGTGGTGCCAAATTACATTTAAAAATTCCACATATGAAGGGTGAATCATCATTTTATGAGTCACATAAACA AAATTATGCATTAAGAACTAAGACAGATAATAATACTTCGTTGTGGGGTGATTAGCTTTTTATTTTTACTAATCACCCCT TTGTCTGCTTTGTCTCTTTTTTAGCTTTGTTTTTCAAAGCTGTGATTAATACACTCTTTCGTTTTCTATAAAAGAAACTA ATATTTATTATATTTACAGGGACTAATAATGTATATAAGTGAAATATAATACTACCTCCGGTTCTCTTTATAAGAAATTG AAAAAAAAATATTCACATAGATTAAGAAATGTAGTTAAAATAGTTAAAATGCATTAAATTTATCTTGAATTAAAATAAAC TTCCAAAATTACCATTTGTTATTAGTGTTGGAGAGTGTGAAAGAGAGAGAATCAATTATTCACATTACTAGTTAAAATTA ATAGGGGCGTCATTGGAAAAAAAAATCATTAATGTAGCAATTCCGACTGTTTGCAACATGCGAATGCCTCCTTCCCACTT TCGATCT
Download Genomic Sequence

CDS sequence (LotjaGi3g1v0433300.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGAAGATGATAAAGGTACAGTTTGTGTAACAGGTGCAACAGGGTATGTAGCATCATGGCTAATTATGAGGCTTCTTCA ACATGGTTACTCTGTCCGAGCCACCGTTAGATCTCACCATGCTGCAGAGAACAAGAAAGACCTCAGCTATCTAACAAACT TACCGGAAGCATCAAAGAGGCTTCGAATCTTCCATGCTGACCTCAACCAAGCAGGTAGTTTTGACAATGCTATTCAAGGG TGCGCGGGAGTGTTCCACCTCGCGCACCCAATGGACGTGCAAGGCCAAGAGCCTGAAGAAGCGGTCACAAAACGTGCTGT GGAAGGAACTCTAGGAATTTTGAAGGCGTGTCTGGAGTCAAAGACAGTGAAGCGAGTGATTTACACTTCTAGTGCCGTAA CGGCCCTGTTCAATGGAAATTTAAATATTAATGGTGATCAAAACTTGGTGGTGGATGAAGATTCATGGAGCGATTTAGAA ATTTGCCGAAGTTGGAAGCTTGTGAGCTCTTCGTACTTGGTCTCCAAAACTTTAACTGAGAAGGCTTTCTTGGAGTTTGG AGAACATAATGGATTGGAGGTGGTCAGCTTGGTTCTTCCTTTGGTTGTAGGACCTTTTGTTTGTCCCAAAATACCATCAT CTGTCTATATAGCACTTGCCATGATCATCGGAGACGAGAGTCGATACGATTATCTCACCAACTCATACATGGTGCACATA GATGATGCCACCAGTGCTCTTATATTTCTTTTTAATCATGGTAATGCTAATGGAAGGTATATTTGTTCCTCAACCCAAAT ATCATTTTACCAAATGTATGAATTTCTTCGTGGAAGATATCCAGGGCATCACATAACAATTCCAAAGGAGATGACAATTG CAAATAGTGATCGAAAGTTCAGTGTTCTATCATCAACAAAGCTCTTGAATACTGGGTTCAAGTTTGAGCATGGCATCAAT GAAATGTATGATGGAGCTGTACAGTGCTGCAAAGAGAAGGGCTTTCTTTAG
Download CDS Sequence

Protein sequence (LotjaGi3g1v0433300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MEDDKGTVCVTGATGYVASWLIMRLLQHGYSVRATVRSHHAAENKKDLSYLTNLPEASKRLRIFHADLNQAGSFDNAIQG CAGVFHLAHPMDVQGQEPEEAVTKRAVEGTLGILKACLESKTVKRVIYTSSAVTALFNGNLNINGDQNLVVDEDSWSDLE ICRSWKLVSSSYLVSKTLTEKAFLEFGEHNGLEVVSLVLPLVVGPFVCPKIPSSVYIALAMIIGDESRYDYLTNSYMVHI DDATSALIFLFNHGNANGRYICSSTQISFYQMYEFLRGRYPGHHITIPKEMTIANSDRKFSVLSSTKLLNTGFKFEHGIN EMYDGAVQCCKEKGFL
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR10366
2 336 335 6.1E-147 –
PANTHER
PTHR10366:SF611
2 336 335 6.1E-147 –
Gene3D
G3DSA:3.40.50.720
5 336 332 8.1E-106 –
SUPERFAMILY
SSF51735
5 331 327 5.25E-56
IPR036291
CDD
cd08958
8 313 306 2.55322E-114 –
Pfam
PF01370
8 257 250 1.3E-18
IPR001509

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003824
Molecular function Catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
Subterm of
GO:0050662
Molecular function Coenzyme binding Interacting selectively and non-covalently with a coenzyme, any of various nonprotein organic cofactors that are required, in addition to an enzyme and a substrate, for an enzymatic reaction to proceed.
Subterm of

Genome browser

Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0433300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…