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LotjaGi3g1v0435400.1

Overview

Field Value
Gene ID LotjaGi3g1v0435400
Transcript ID LotjaGi3g1v0435400.1
Related isoforms 2
Lotus japonicus genome version Gifu v1.2
Description methyltransferase; TAIR: AT3G13440.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Swiss-Prot: sp|Q9Y5N5|HEMK2_HUMAN HemK methyltransferase family member 2; TrEMBL-Plants: tr|Q2HS71|Q2HS71_MEDTR SAM (And some other nucleotide) binding motif; Methyltransferase small; Tetratricopeptide-like helical; Found in the gene: LotjaGi3g1v0435400
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:84671190..84676424) extracted from Lotus japonicus Gifu genome v1.2.

GAAACTCTCACTCCCTCTTGTAACCAAAAAACCAAAGAGTCCTCCACACTGATGCTGATTACTGAGTAAACCTGGCTCGC TCTTCACTCCATCTCGTCTCGTTTGACACTTCAATCTGAAACCACCTTCCACCTTCTTCTTCCTTCGTTCACGGTAAGCC CTGTTTCCATCCATTCCTTTCAAATTTTCTTTGAATCCATTGTTTAGGGTTCATACTTGGTTCTGATTCTGAACAATTTT TTCAGCTGTTTCCCTCTGACCCAATTCAACCGTTATCATCATCTGTACGCTTCGTTTCTCATGTACGCTCCTCTTCTTAC ATTCTTATTACACATACGTATAGTTTTAGCTTTTTCATTTTTCTCAATTAAGGCCTTCGAGTGTGAATTTCACAACTACT CACAATTATATAAATAGCTGAATATTATCCCTTCAATGTCTGTCTTTTATAATCCAATCTTGTGAAAAAGTTGTGGAAAT TTTTTCAGTGAACATTGTGAAGCCATGCCCATTCTGTTTGTCGGCAAATTCAGATATCGATATAGATATAGATATAGATA TAGCTACCCTTTGATCCCGACAGCCCCACCTTTTATCCCTTTTCTCTCGTTGTTACATACTCGGTCGTTAGCTCCCCTTG TCAAACCTATCAATTGGAACACCACCCACAGTTTTGTTTGGAAAAATCCGCTTCTTTCGATCTTGGAAAGATGTAAGTCA TTGGTGCAGTTGAAGCAAATCCAGGCTCGGATGACCGTGACGGGCTTGGTTGATGATGGTTTTGCTGCGAGTCGGCTCGT TGCCTTTTGTGCTCTCTCTGAATCGCGGGCCCTTGAGTATTGCAGTAAAATCTTGTTTCATGCACGAGAACCCAATGTCT TTTCTTGGAACGTGACGGTAAGGGGATATGTGGAAAGTGGGAGCTTAGAAGGAGCTCTTTTGATGTACAGGAGAATGTTG CAGGGTGGTGTTTTGAAGCCAGATAATCATACTTACCCTTTACTGATTAAAGCTTGTTCTTGCCCATCTTTAAATTGGGT CGGTTTTACTATACTTGGGCATGTGTTGAAGTTTGGTTTTGAATCAGATATATTTGTGCACAATGCTTCAATCACTATGC TACTCTCATACGGAGAGTTGGAGGCAGCATATGATGTGTTCAGTAAAAGTTGTGTGAGAGACCTTGTAACCTGGAATTCC ATGATTACTGGGTGTGTTAGAAGAGGACTAGCAAATGAGGCTATAAAACTCTATCGAGAAATGGAGGCAGAGAAAGTGAA GCCAAATGAGATTACAATGATTGGGGTCGTTTCTTCTTGTTCTCAGTTACAGGATTTGAATCTTGGCAGAGAATTTCATC ATTATATCAAGAGACAAGGGCTTGAGTTCACAATTCCACTCAATAATGCGCTTATGGATATGTATGTGAAGTGTGGGGAC CTGTTAGCTGCACGAGTTTTATTTGATAACATGGCACAGAAGACCATTGTTTCATGGACTACAATGGTTTTGGGATATGC TAGATTAGGTTTTCTGGATATTGCTCGGGAGCTTTTATTTAAAATTCCAGAGAAAAGTGTTGTGCCTTGGAATGCAATGA TCAGTGGCTGTGTCCAAGCTAAGCATAGTAAGGAGGCATTGGCTCTATTCCATGAAATGCAAATTAGAAAAATAGAACCT GATAAAGTGACCTTGGTTAACTGTCTTTCTGCGTGCTCCCAACTAGGAGGACTTGATGTCGGAATATGGATTCACCATTA TATTGGAAAACACAGTATTTCTCTAGATGTTGTTGTAGGAACTGCACTAGTTGATATGTATGCCAAGTGCGGAAATATTG CAAGGGCACTCCAGGTTTTCCAAGAGATTCCTCAAAGAAACTGTTTGACCTGGACAGCCATCATTTGTGGTTTAGCACTT CATGGGAATGCTCATGACGCTATTTCCTATTTCTCGAAAATGATTCATAACGGATTAATGCCTGATGAGATCACCTTTCT TGGTGTCTTACAAGCATGTTGTCATGGAGGTTTAGTTGCAGAAGGCCGTAAATATTTTTCTGAAATGAGCTCTAAATTCA ATATATCTCCAAAGGTTAAACACTACTCATGCATGGTGGACCTTTTAGGAAGGGCTGGTCATTTGGAGGAAGCAGAACAG CTTATTAAAAGTATGCCCATGGCGGCTGATGCTGCTGTGTGGGGTGCTTTATTCTTTGCTTGTCGAGTACATGGCAATGT TCTAATTGGAGAGAGGACAGCTTTGAAGCTTCTTGAGATTGATCCTCATGATAGTGGAATTTATGTTCTGCTTGCTAGCA TGTACCGTGAGGCAAAAATGTGGAAGGAGGCAAGGAGTGCAAGGAAAATAATGGAGGAGAGAGGAGTGGAAAAAACGCCT GGTTGCAGCTCAGTTGAGATCAATGGCATTGTTTATGAGTTTGTGGCGAGGGATGCATCACACCCTCTGTCTGAATGGAT TTATGAATGCCTGGTTTCATTGACAAAACAACTGTAGCTTCTTGGATTTACAGTGGGCACTCCTACTTATTGATATAATC GTTTTTCATTAACTTGTCAGCCTGTTTACCAGGTCTCTTCATATTTAGTTATACTCTTACCTTTTCATTCTATTCTATCC ATAGGCTTCTATCTACCTTAGAAATGTATAAGTGAACCATGTCTCTTCAATCCTTAATCCTTTCACTCAATCCTGAACCA TGCCTCACACATATGTAGTTATACGCTTACATAAATATGCAGATTGTTGGATTGTTATTTATGGCTATATTTCAGTGTCT GTCTTTTAAAACACAAAGACTTTCCCTGCTTGTCATCAAATATTCTCTTGGTTAGCCAGCCAAACGTTTCCCATATCCTC TTCACCTGTATAGATTTTATTATGCTTCAGAGTTCAGATGAGCCCTTATGTTTTTTTATTCCTGACTCCTGTATCATGTT AAGGATACCTTCGATTCTACTAAATTGTGTCAAGTTTGTTATGCATTGCAAGGATGAACTGGACTATGTGTTTATGCATG CACTGGGTTTACTCTCCCATTGTTGGAAGTTGTGTGGGTTCTCCTCTTCCTTTCCTTTCATTAAGAATTTTACTTCAACG AAGACAGATTATTATAAAACCAAAATAAATATATGGAGTATCCAAGCTCAGAAGGTGTGGCTGTGGAGATTAAACAGTAT GCAAAATATGGTTTTGATTTGCAGAATTATCCACTTGCTTTTGCCACTTAGTTTTTGTCCATGTTTCATGGTTTCATCTT TTAAATGGTCAATTCTCATACTTATGGTTTTGTTAGGACCTGCAAATAGGTTGTGATCTGTTATCATTACGGAGCTTTGA TATTGTCAATATGTATGATTTTATGATAAGATTCTTCAAGAGTCAAGACTAATTTTATGTTGATTCTTCTTCACAGATTT TCTAAACAACCATTAAAACCACATGATTGTTTATCCGAGTAACTGATATCCACACATGCTCTATATGATTTCCCCCTAGA ATTTTATGCAGACATGTTCATTTTGGAGAAAACTTCCATAGGTTTAAAGTATTGGACTTCTATGGTAAATGACTTCATGG CTTGGTTTTACATTCTACTGGAAGAAGAGGTCAAGTTGAAGAAAATTTCAATACTTAGACCATAGATCTTATACATTGCT AATACAGATTTTTATCACTAGCGTTTGAAAGCATTTAACTATTTCTTGTCAATATACTTTATCAACAAGGGCAGAAGAAT ATTTGTTTTAAAACATGTGAAGACATCACATTGTTCACCCACTTATTTCAGCCTCTTGATATGATATATCATTTTATTTT CAAGACATGTATTCATTTTCTATTTCCTGTATTTGTGTTTTTATTTTAAATTGAACTGGTTTATTTTTCCGCTGCTATGT ACCATTACCTGTGTGGTTTTGAATATTGACAACTAACTTACTCTTTAGTCTTGGGCTCAGGACTTTGAAGTTGGGAGGAA GCTGAAGTTATAAATTTTGTCTAGACATTGACCAGAGCAATTCAGAACTGAAATCAATAAAAGTTTTTTGCATATCACTA CCAAAGTGGACAACGGTGAAATGGTAGGGCTGCCCAAAGTCTTTGTTGCTTCTACTTCCCCAGCCCCACTTTGAATTGCA CTGAACCATTAAGGTTTACTGACAGCTATTTCCTTAATGATAGGCTTCGAGAAAGGAGTTATCTAGAACTGCTCAAATTC GCCTTGTGAGTTCACATGAGGAGGTTTATGAACCGTGTGATGATTCTTTTGCGCTGGTTGATGCTCTTCTAGCTGATCGC ACTAACCTTTTGGAACATCATCCAGCATTGTGTATGGAGATAGGCTGTGGTAGTGGATATGTTCTTACTTCCCTGGCTCT TATTCTTGGGCAGGAAGGTTGTGTCATCAACTATATTGCAACTGATATCAACCCTCATGCAGTTAAGGTGACCCGCGAGA CATTGGAAGCACATGGAGTTAATGCAGAGTTGATAATAACGGATATTGCGGCAGGACTTGAGGAACGTCTAGCAGGGTCG GTTGATGTTATGGTTGTAAACCCTCCTTATGTGCCTACCCCTGAAGCTGAAGTGGGCGCTGAAGGCATTACATCTTCTTG GGCTGGCGGCGAGAATGGCCGGAGTGTAATTGATAGAATTTTGCCTGTTGCAGACCATCTTCTGTCAGAAAAGGGATGGT TATATATGGTCACCCTCACAGCAAACAATCCTTCTGAGATATGCCTTCAAATGAGAAAGAAGGGGTATGCTTCTAAGATT GTTGTCCAAAGATCAACAGAGGAAGAAAGTCTCCACATCATCAAGTTCTGGAGGGATCTTGACGCCGAAGTAGATGAAAC TACAGACCAATCTGCTTCTGGGTTCATAGGCTCCTTGCTTACACAAATTCCTCTGCTTTCATTTTTGAAAGGCAACAATA GCGACAATAAGAGTTCAATGAGAAAGTAATTGATTGCCTATGTTTCTGTGATACCCTGTCTTGGCAACTATAATGTTTTA TATTGCCCTGGCTTTTAGAATGCTTATAAATACAGCCACCAATTCTTACATCACTAGGTTGAGTTTGATATATGGATCAA TTGACACCATTGAACTTTATCAAAACCATTTACAGCTAGGTCTAACTTATAGATTTTCCCCATGATTTTCTTTGGTCTCT ATCTTTCTAATCAAACCATCTTCTAATTTATCTGC
Download Genomic Sequence

CDS sequence (LotjaGi3g1v0435400.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGCTTCGAGAAAGGAGTTATCTAGAACTGCTCAAATTCGCCTTGTGAGTTCACATGAGGAGGTTTATGAACCGTGTGA TGATTCTTTTGCGCTGGTTGATGCTCTTCTAGCTGATCGCACTAACCTTTTGGAACATCATCCAGCATTGTGTATGGAGA TAGGCTGTGGTAGTGGATATGTTCTTACTTCCCTGGCTCTTATTCTTGGGCAGGAAGGTTGTGTCATCAACTATATTGCA ACTGATATCAACCCTCATGCAGTTAAGGTGACCCGCGAGACATTGGAAGCACATGGAGTTAATGCAGAGTTGATAATAAC GGATATTGCGGCAGGACTTGAGGAACGTCTAGCAGGGTCGGTTGATGTTATGGTTGTAAACCCTCCTTATGTGCCTACCC CTGAAGCTGAAGTGGGCGCTGAAGGCATTACATCTTCTTGGGCTGGCGGCGAGAATGGCCGGAGTGTAATTGATAGAATT TTGCCTGTTGCAGACCATCTTCTGTCAGAAAAGGGATGGTTATATATGGTCACCCTCACAGCAAACAATCCTTCTGAGAT ATGCCTTCAAATGAGAAAGAAGGGGTATGCTTCTAAGATTGTTGTCCAAAGATCAACAGAGGAAGAAAGTCTCCACATCA TCAAGTTCTGGAGGGATCTTGACGCCGAAGTAGATGAAACTACAGACCAATCTGCTTCTGGGTTCATAGGCTCCTTGCTT ACACAAATTCCTCTGCTTTCATTTTTGAAAGGCAACAATAGCGACAATAAGAGTTCAATGAGAAAGTAA
Download CDS Sequence

Protein sequence (LotjaGi3g1v0435400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MASRKELSRTAQIRLVSSHEEVYEPCDDSFALVDALLADRTNLLEHHPALCMEIGCGSGYVLTSLALILGQEGCVINYIA TDINPHAVKVTRETLEAHGVNAELIITDIAAGLEERLAGSVDVMVVNPPYVPTPEAEVGAEGITSSWAGGENGRSVIDRI LPVADHLLSEKGWLYMVTLTANNPSEICLQMRKKGYASKIVVQRSTEEESLHIIKFWRDLDAEVDETTDQSASGFIGSLL TQIPLLSFLKGNNSDNKSSMRK
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR45875
8 219 212 1.3E-93 –
PANTHER
PTHR45875:SF1
8 219 212 1.3E-93 –
SUPERFAMILY
SSF53335
19 200 182 3.06E-25
IPR029063
Gene3D
G3DSA:3.40.50.150
20 224 205 5.6E-41 –
TIGRFAM
TIGR00537
22 217 196 1.7E-27
IPR004557
Pfam
PF05175
48 131 84 1.4E-9
IPR007848
CDD
cd02440
53 181 129 1.98651E-9 –
ProSitePatterns
PS00092
124 130 7 -
IPR002052

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003676
Molecular function Nucleic acid binding Interacting selectively and non-covalently with any nucleic acid.
Subterm of
GO:0008168
Molecular function Methyltransferase activity Catalysis of the transfer of a methyl group to an acceptor molecule.
Subterm of
GO:0032259
Biological process Methylation The process in which a methyl group is covalently attached to a molecule.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0435400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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