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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0435900 |
| Transcript ID | LotjaGi3g1v0435900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Arginase; TAIR: AT4G08870.1 Arginase/deacetylase superfamily protein; Swiss-Prot: sp|O49046|ARGI_SOYBN Arginase; TrEMBL-Plants: tr|A0A0B2RR74|A0A0B2RR74_GLYSO Arginase; Found in the gene: LotjaGi3g1v0435900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:84727124..84730076) extracted from Lotus japonicus Gifu genome v1.2.
CTAAGAAGTGTGGTGACACATCATATAACAAACACATTATCAAATTAAAATTGATTAAATTATACAAGACTGCCCATGGG AGTAATTATGAGTACGTTATAAATAGCGAGCCTGCAGTTCAGCTTAGCAACACAACGTGTTTCTCAAATAGTTAAAGTTA GAGCCTTTTCATTGCTACACAAGCAAAAATGTTCCCCAAAGGTATTTTGCTGTTTTCTGAGAAGCATTTTGATTCAATGT TTTTTTTTTGGTCAAATTCAATGTTTTAACATTGAAGTTAAGAATTTATATAGTTTGATGTGGGCCGGGTTGAGTCACTT GCTTGTGTTTGCTGAGTTTTGTGGTTTAGTTTTGGAAAGAATAAGTTAGTGCTGCGGATCATGATAAAAACCTGTCCACT TATGAATCATATTTTTATCACTAATATTCATGATCAATATATGCTAAATTTAATTTGCAGATAAATCATTTTAATTTATG AACTATATTTTTCTTCGTATACATAGCCAAGAAGTTAATTTACCAAATTTCAGTGTAAGGTTGCAGAATCATTGAAAAAT CAATACTAGCTAGCTAAATTGTATTTCTATAATTTGATTTTGATTCAGGAATGACAACGATAGCACGCAGAGGCATCCAT AACATGCAGAAGCTATATGCTGAAAAATTAACTCCTGCTTCCACCGAACAAGGCCAAGATCGCGTGATACGGGCTGCACT TTCACTTGTAAAAGAAAATGCAAAGCTCAAGGCAAGTCATTTATATTTGTTTATACGACAATGCTACGTGTTGCGAAAGA AAAATGCAGGTAACAAAAGAAAAAATGATGTGGCAAAATAAACAGTACTGGGTTAACTTCAAATTTTTCCTTAATTAACA GTTTAAACTTTTAAGATAATTGGTTCATGATACATATTGTGTGATGATTTTCTTAAAAAAAAAAAGCTTTAGATTAAATG CAGAAATTGTTCTCGTGCAGGGAGAACTTGTGCGTACTTACGGAGGTGCAGTAGCTACTGCAACTCTATTGGGAGTTCCT TTGGGACACAATTCTTCATTCCTTCAAGGGCCTGCATTTGCACCTCCTCACATTAGGGAGGCCATTTGGAGCCATAGCTC AAACTCAACAACTGAAGAAGGTAGTAGTCATGTGTTTTTCCGCACAATAGTATATGTTTGGATACCTATTAACACTGGTG CACAGAGACATTGGCACTTGCTTTAGGTCAATTTGATGGTAGACCATATTAAAAACGGATCCGCTTATGTTAATTTACAG AGAAGCTCTTTTAACTTGTGAACCAGAATTTTCCTAAACCAGTAGAGAAAACTCTTTAAAACTCTTATGAAATATAGCAT GATTTTCTGATATTGCAGGCAAGGATCTAAAGGACCCACGAGTGCTAGTTAGTGTTGGTGATGTTGCTGTTCAAGAAATT CGAGAATGTGGGGTAGATGATCACAGATTGATGAATGCTGTTAGTGAAGCTGTCAAGACTGTGATGGATGAGGTATTTTT GGAATGTTTTCTTGTGGAAAAATACTGTTACATGAATTACCATATTTTCTGGTAATTTTCAATTTGAACTAGCTAGATAA TTATATAGCATGATACTCATGGTGTTGACAATGTTTCAGGATCCATTGCGTCCCTTAGTTTTAGGTGGAGATCACTCAAT AACATATCCAGTTGTTAAAGCTATCTCTGAGAAGCTTGGAGGACCAGTTGATATTCTTCACTTTGATGCACATCCTGATC TCTATCATTTATTCGAAGGAAACTTTTATTCCCATGCTTCTTCTTTTGCTCGAATCATGGAGGGTGGCTATGCTCGGAGA CTCTTGCAGGCAAGTTTATATCTTCATATCTTGATGCTTACAGAATTTATATCCTTAATGGATCCGGATTCCCTGCAGTC AAAATTTCTTGAAGCCACTGCAGTTAGAGTTTGGTATCAGTTAGATAAGGTCGGATGGCTGAAATATAAAATAACAATTA TCCACATAAAATTGTTCTCTTTAATCATGTTGAGCTGGATCAAGACAGAACCATGACTCTGCGACATCAGGGAATTTTGA CACCAGGGGAATCTAAATCCATAATGTTCATGCTTTTAATTGATTAATCTCATTGCAGGTTGGTATAAGATCAATAACAG CTGAAGGGCGTGAACAAGCCCAGAAATTCGGGGTAGAGCAATATGAAATGAGAACATTTTCAAGGGATCGCGAAATGTTG GAGAACTTGGTCTCTCTCTCTCTACCTAGTGTTTGTGTGTGTGTGTGTTGGAAATAATAACTGTGCTAAGTGCTAACATT CATTTAAATCATGGAAATATGCATTTGCAGGAACTAGGACAAGGTGTTAAAGGTGTGTATGTCTCAATAGATGTGGATAG TCTTGATCCAGGGTATGCTCCAGGAGTGTCTCACATTGAATCAGGAGGTCTTTCTTTCAGAGATGTGATGAACATCCTTC AGAAACTTAGAGGTGATATTGTTGGCGGCGACGTGGTTGAATACAACCCACAAATGGATACTGCTGATGATATGACTGCT ATGGTTGCTGCTAAGTTTGCCAGAGAACTTGCGGCAAAGATGTCAAAGATGTCAAAGTGATCCATGAATCTCCTAAGGCT TGTTTTTCAGTGTGGCATTTAGTTTTCTCCAGGTTTTAATCATCAATAAAATGGTACAGATGTATGTACCTGTGCTTTAT CTATTGGTAAAGGTTGTGCAGTACAATGCACTCAAACATGCATGTATTTATTGTTCTTAGCATATCTCCAATGAACTTGA GTTTTAGCTAGTGAGTTTTCATATTGTAATGTTTGTTTCCATGTACTCAATTTGAAAATTAAAGCAAGGTTCCAGAAGAT TAAAACTTCTAAAGCTCATTGTTATGAGAGAGTTTGTTTAAATTAAGCAATAAAATTCACAAAGTTATGTCAA
CDS sequence (LotjaGi3g1v0435900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTCCCCAAAGGAATGACAACGATAGCACGCAGAGGCATCCATAACATGCAGAAGCTATATGCTGAAAAATTAACTCC TGCTTCCACCGAACAAGGCCAAGATCGCGTGATACGGGCTGCACTTTCACTTGTAAAAGAAAATGCAAAGCTCAAGGCAA AACTTGTGCGTACTTACGGAGGTGCAGTAGCTACTGCAACTCTATTGGGAGTTCCTTTGGGACACAATTCTTCATTCCTT CAAGGGCCTGCATTTGCACCTCCTCACATTAGGGAGGCCATTTGGAGCCATAGCTCAAACTCAACAACTGAAGAAGGCAA GGATCTAAAGGACCCACGAGTGCTAGTTAGTGTTGGTGATGTTGCTGTTCAAGAAATTCGAGAATGTGGGGTAGATGATC ACAGATTGATGAATGCTGTTAGTGAAGCTGTCAAGACTGTGATGGATGAGGATCCATTGCGTCCCTTAGTTTTAGGTGGA GATCACTCAATAACATATCCAGTTGTTAAAGCTATCTCTGAGAAGCTTGGAGGACCAGTTGATATTCTTCACTTTGATGC ACATCCTGATCTCTATCATTTATTCGAAGGAAACTTTTATTCCCATGCTTCTTCTTTTGCTCGAATCATGGAGGGTGGCT ATGCTCGGAGACTCTTGCAGGTTGGTATAAGATCAATAACAGCTGAAGGGCGTGAACAAGCCCAGAAATTCGGGGTAGAG CAATATGAAATGAGAACATTTTCAAGGGATCGCGAAATGTTGGAGAACTTGGAACTAGGACAAGGTGTTAAAGGTGTGTA TGTCTCAATAGATGTGGATAGTCTTGATCCAGGGTATGCTCCAGGAGTGTCTCACATTGAATCAGGAGGTCTTTCTTTCA GAGATGTGATGAACATCCTTCAGAAACTTAGAGGTGATATTGTTGGCGGCGACGTGGTTGAATACAACCCACAAATGGAT ACTGCTGATGATATGACTGCTATGGTTGCTGCTAAGTTTGCCAGAGAACTTGCGGCAAAGATGTCAAAGATGTCAAAGTG A
Protein sequence (LotjaGi3g1v0435900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFPKGMTTIARRGIHNMQKLYAEKLTPASTEQGQDRVIRAALSLVKENAKLKAKLVRTYGGAVATATLLGVPLGHNSSFL QGPAFAPPHIREAIWSHSSNSTTEEGKDLKDPRVLVSVGDVAVQEIRECGVDDHRLMNAVSEAVKTVMDEDPLRPLVLGG DHSITYPVVKAISEKLGGPVDILHFDAHPDLYHLFEGNFYSHASSFARIMEGGYARRLLQVGIRSITAEGREQAQKFGVE QYEMRTFSRDREMLENLELGQGVKGVYVSIDVDSLDPGYAPGVSHIESGGLSFRDVMNILQKLRGDIVGGDVVEYNPQMD TADDMTAMVAAKFARELAAKMSKMSK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 6 | 343 | 338 | 4.2E-186 | – | |
| PANTHER | 6 | 343 | 338 | 4.2E-186 | – | |
| Gene3D | 36 | 346 | 311 | 1.8E-70 | – | |
| PIRSF | 43 | 345 | 303 | 2.4E-61 | ||
| ProSiteProfiles | 54 | 346 | 293 | 49.354 | ||
| SUPERFAMILY | 65 | 341 | 277 | 1.33E-66 | ||
| Pfam | 66 | 337 | 272 | 1.5E-66 | ||
| CDD | 68 | 338 | 271 | 6.67535E-95 | – | |
| ProSitePatterns | 269 | 290 | 22 | - | ||
| Coils | 334 | 346 | 13 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines | Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a linear amidine, a compound of the form R-C(=NH)-NH2. | ||
| Molecular function | Metal ion binding | Interacting selectively and non-covalently with any metal ion. |
Expression pattern of LotjaGi3g1v0435900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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