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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0436800 |
| Transcript ID | LotjaGi3g1v0436800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Methionine aminopeptidase; TAIR: AT2G45240.1 methionine aminopeptidase 1A; Swiss-Prot: sp|Q9SLN5|MAP1A_ARATH Methionine aminopeptidase 1A; TrEMBL-Plants: tr|V7AMJ4|V7AMJ4_PHAVU Methionine aminopeptidase; Found in the gene: LotjaGi3g1v0436800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:84803828..84811575) extracted from Lotus japonicus Gifu genome v1.2.
GTTGGGCATCACAGGAGGTAAGAGGCTGCCGAAAGAGACAGGCCCAGTGGGTTGACTTGCAAAATTGAAAGGGCCTAGTC CAAATTCAAATCCACATCTTCCTTCATAAACAAAAAAAATTCATCTATATATCATTTCTTTTGACTCTTCCTCAGCTTGT TCTGTTCGACTCTTCCGACTTCCATTAACGTGTCTGCAAATCGCAAACCCTAGTCCTCTGGTGCTTGTAATCAATGGCTG GTGAATCCGATGTTTCCGTAAGCACCCTTTCTTGCACCAACTGTGCCAAACCTGCAAATCTTCAGTACGTAACCCTCTCT CTCTCTCTCTGTTGTGTGTTCTTTAGCTGCTCTGACAAGTCACACTGTGATTCTTTTTCTGTTTTTGAATTTGATTTTGG ATTGTAAGATTGTATTTCTGCATTTGAAATGGTTTGGTTTCTCATAAAGACTTGGTCCTTGCTGTGATTGAATGGTTTTT TATTGGTTTGAGCAAAAACGCTTCTGCTGCTGGTTGCAGCTAGCTTGCAATTTTTTGTTTATTTTGATGGCCTTGTAATT GGGTGTATTATGGATTGGGATCATAATGCTGTATGGACCATGCAAGGGCAATTCTTTATGCATGTTTAATTTTGACCCAT TTTTGTTTTCTTTTTCCCCCTCAGGTGCCCAAAATGCTTGGAATTGAAGCTTCCCCGTGAAGGTTCTGCCTTCTGGTATG TGATTTTTTTCTTACTTTGTGCGTTATTTGTCCGTGTTTTTAGTGTAATTGAATCTTGGGGGACAATTCTAAAATGAAGT AACTACTAAGACCTAGTGTATTAACTGCAACATAATGCGTAAGTTGGTTGTACTACATAGTAATCCTGTTCTAGTCGTTG TAAGTGAAAGAAGTAAGTTCTTGTTGACATATTTTAATATTTATAAGTGATTGATTTAGTTATTAGGGACTGGAAATTTG GTTAAAGGAATGACATTGTTGCTCCGAATGGCACCATTAGAAGGTGACGTTGACCTTGGTTGCTAAGGAGAGAACAGTGG AACTAGATAATTAGTGTTCCAACTTACAACAGCTGAATCATGCAAACTCACTTCTCACTGTTTTTGTAACCCTTGAATTG GAGCCAATTTTGATATCTCTTGACAGCTCTCAGGAATGTTTCAAGTCTTCATGGAGCTCCCACAAAGCAGTGCATCTGAA GCCAAAGCAATCCTCACTTGGCACACAGAATTCAGATTCACTTGGTGAAGGTTGGTTATATTGCATAAAGAGAGGGCAGG GTCGGACTCCAAAACTTCCTTACTTTGATTGGACTGGGTAAGTATCTAGGTCTTTGAGCCGCTTCATAATATAGAAGACA TCTTACTATGCTTTTAATTGATAACAGAAGATTATGTTGGTTATTAGTAATGATATGTTTTTGTTTTTGAATTTCAGAGT CTTCCCCCCGTTTTTTCCTTCTTTTCATTGATGTTTTTCTAGTCTGGCATCTGACGTTTGTAGCATTAAATTTGCAGCAT TCTTTCCCAGTTATTGCTTATTACTCTTATTTTTTGAAACCAAAGTCTCATTTCTGCTCTTGCTAGGATGCTGCGGCCAT ATCCCATATCTAGCAAACGGATTGTCCCAGCTGATATTGATAAACCTGATTGGGCTGATGATGTGAGTTATATGAGTTCT GCCTATTTAGATGCCTTTTATTTTATATGATTTATCTCATTTTACTTGAATACGTTTGGAAGCTGTCTTCTGATACCTTA ACTGTGGTTCTTTGGTTTCTAAATTGTTTTTACCTCTTTTGTTTTCAACTTAAGGGAATTCCGAAAGTTGAGCCCAATAG TGATCTGCAGCATTTTGTTGAGGTAATTAATTTAAAAATGCATTAGTAGACAATGGATGTGAGATCAAGTTGCATATTGT CTGATTCTACTTTCCAACCTATTATTTTGCAGATCAAATCTCCAGATTTAATTGAGAGAATGAGAGAAACTTGTCGGGTG AGTTCCTAGCCTTTTTATCTTTTAGTTTCTCATGTAGCAGGTTTGAACTCTCTGCTATCTTGATTCTCATTCAACGCAAT ACTGATTTGTATCCTTATTTTCATGGTGCTCAGCTTGCTGCTTACTTTGAGAGTCGATTTCTGTTACTTGCCAACTGTAT ATCTACTACTATGTTGATTAATGATCACATTGAATTAATACTTTGATATATCTAATAAGCTGGAGGGGGGAAGAAAAGAA AGTAAATATCTTGAATTATTACAAAAAATTCTGAAAGAAAAAAAATTGTCTTTTTCCTTTTTAGGACAGTTACTTGATAT GACTATATTGTCTAACGTGGATAAACTTTTGACAGAACGTCTTTAAAGATCACAGTTGTTTATTTTTTGCAATGTATGTT GGTACTTTAGACTCATTTCATAAATTGATTGATAGATTGGAAGGGAGGTGTTGGATGCAGCTGCTCGGATTATTCAGCCT GGTGTGACTACTGATGAAATTGACAGAGTTGTTCATGAGGCAACTATTGCTGCAGGTACTAATTATAATGAGTTTCATTT TTAAAACAGTCTTTTCAGCTTTTTACCTGCTTTATTTATTGAATGTTATTAAGCTTATCGTATTACCTTTAGAAAATATC AGCATTACTGTAGCTGGTGAGTGTGTATCTTCTGTTGTTATAATATAATTATTTATAATGGAGACATAACATACCATTTG TTTGAGTGTTGATTCCGATCTAAAACTGTAAGAGTTGTATTAAATGGTGGTGCTCTGTATGAAAAATAAGTTTTTTTGGG GATAGAAAAGTAAATTCATTAGATATTAGATAGTACATAGGTAAAGTACATCCAGGTTGGAGAGAAGATATTGTCCAAAA CAGGGGAGAAAACTAAAAAAGATTCCAAAAGATATAGCAAGGCTGCCCAATATCTCTGCATATAAGAATGAAAATTCTCT TAAGAAGCAGAGAACGTAGGAGATGGCATCCTTACCCCATATTATTCTGTTCAGCATACAGTTCCTTGCCTTTCTTGATT CATTGCATTTTGGTAATTATAATTAGTCATTGATATTTGAAGTTTTTTTTACCTTTGTAGGAGGATACCCATCGCCTCTC AATTACCATTTCTTCCCAAAATCTTGCTGCACGTAGGTACTTTCCTTCTGTGCATATTCTATTTTTTCTGGTCTGTCTGT AATTGTTACAAATGAAGTTGCTCTTTCTAACAGGTCAGTTAATGAAATAATCTGCCATGGAATTCCTGATGCAAGGTACA ATGCTCTTTTCTTATTTATTCATGCTATGGTTTTTCTTTGTTGCCAGTATTTAATTTTAAGTTTAGATCCTGAGTTCTGA CTATAATTAGTGGAAAATAGCTTTCCCAATTAATCCTTCTTATCAATACTTTATACTTGATTAGGTGAAGTGCCACTTAG GCATGATAAAATAAATATTTGTATCAACTTGTGAAATTCTCAATAATTTAGTCATTCCACAGGAAGCTTGAGGATGGTGA CATTGTAAATGTTGATGTCACTGTGTATTATAAAGGTGTTCATGGTGAGTTGATTAACATATATGTGTTACACCATTTTA CTTGAAGTTCATAACATTTGGACACTTGGTTAATTATGTATAAGTTGTTATACAGGTGATCTAAATGAAACATACTTTGT GGGAAATGTTGATGAAGAGTCTCGCCAGCTGGTCAAGTGCACATATGAGTGCCTGGAGAAGGCAATATCCATTGGTATAT CTCCTTTGAGTTTCAACTAGTCTCTCTTTTCTTTAAGTTTCAAATGTAATTGAATCTTTAAAAAACATTATTGCAGGCTT GGTCTTCTATTTTTCTTTTGTTTGAAGCATGTATCTTAAAACTGTGGTCAATGCATAAATCTAACTGCAAATTTGGTCTT AAAATATGAGTTGAGTATCTTTTGGTCCCTAAAAAGATGACTATTTCTGCAATTTTGAATTTGATTCATTTTTAATCCAT CAAAAGATATAAGAATCATGTGCATTTAGTCCTTGGTGAGGGATTGGAAAAACTACATTTGGTTAATCTAGGGACTAAAA ATAAAATAAAATTTAAATAAGGATTAAAACAACATGAATGTTATATTTTTAGTGAAAAATATAATCTAATTACTTTGGGT CCTAAACCCTAAATCATAAGATAAAAGAATCTTTTAACTATTGAAGAAATTAAAGACAGAAAGACATGTTGATACCTGGT ATTGATAGAATTATACCAGCTACTTAATATGATGTAAATATAAATTATAAGCATCAATTGATGATTGATGATAACCTTAC ATATATGTATTTGGTGTATGTTGTGATTATTGTGTACAAATACTTAAATATAATTAAAATGTACATAATATTAAAAGAAT TTGAAGTACTTGTTCCTGATTCTTCCCTTTTTTCCTAATTCAGTCAAACCTGGGGTGCGATTCCGTGAAATTGGTGAAGT TATTAATCGCCATGCTTCGATGTCAGGCTTCTCAGTGGTAACATATTACTTTTTTGTAACTTATCTATTTTATGGTCTCT GTTCACACTGTTGGATTGTTCTCACTTGTTCCTTACTCATATTTTCCCTTGCCCCCGTAGGTAAAATCGTACTGTGGTCA TGGAATTGGAGAGCTTTTCCATTGTGCTCCAAATATTCCTCATTATGCAAGTATCCTTTCATTGGTTTCAAAATGCATTC AGCACAGTATTTCTGTGTACTTTTCTTTAAGAGTTTTATTTGTATATGCAAATAGTGTAAATGACTTTTACATTGTCAAC CAATCACATTTCAAAGATGTGGGGGAGATAGTTTTTTTTTTACTTTATATTTTTTTTTATAAATTCAGATGTTGGTGTGG CAAACTTCTCGAACATGATTGGTTGTCAGTGTACGAATTCTTTACACTGTCAATACATATGCATTAAAATCTTTCTTTAT CATAAAAGGGACCGGTTTGTGGACATATAATGACTGTTACAATTTAGAAATATTTTTAACGATGTCTGCTATTCACTCTC CTTTTGGCAATACTATTATTCATGCTGTTATTTGCTAGCGACAGGCAGCTTCTCGTTCTTATGCCATTTTTTCATAAATT GTTAGTTAAATTTTGTCTGTCCAATCCAATATTTGAAAGTTTTGCGCCCAAGATCAAACCTACCTCTTCACAAAACCTTT TCAGTATGCACTTCTCTAGCTTGTACTTCCACCCCTTATTGATGTTAAAAATGAACCATGATTACAAGAAAGAAAACGCA TGCGATACACCTTAACAAATGGCAGGAAATAAAGCAGTTGGTGTGATGAAGGCTGGACAGATCTTTACAATTGAACCAAT GATCAATGCAGGTATATTGAAAATTCGTTTAACTGGATAACTTACATGGATACATGTCTCAGCTATTATATCACCTCAAT TTTATTTAATAGGTGTCTGGCGTGATCGAATGTGGCCTGATGGATGGACTGCTGTCACAGCAGATGGTAAACGAAGTGCT CAATTTGAACACACTCTTTTGGTAAGTAAATTTCTGTTTTGTGTTGGGTTCTATATACACATGAAATGATGAAAGTCACC GAAGTCTTATTTGAAAAAATTATCATAATAATTTCTAATATTGGATGAAATATTCAAGAAATAGATGTTAACTTTTATCT TCTCACCTATGATTTGATGATACATTTTTTATTTTCGTACAATGTGTCCTTAACAAAGTCTTTGCAAACCGTTTTGTTAT GATACTGGAGACAACACATTGTCTTAGTAGTTAGTACATGGTGCCTTTTTATCGGTACAAGTACAATGGTGAAGCTTCAA CCTATGTAAAATTTTATTTGAAGCAGTGGCCACTTGTCTAAAACTTGATTTGATTTTGTCAGTGAATTTGTAATTTTGAT TATACTTATAGATGATACTACCTAATTAATAAATTCTCCCTTTTAATTATTAGGTGACAGAGACTGGTGTTGAGGTTTTA ACAGGACGGTTGCAGACATCACCCAAAGTTTTTCCTTGGCTAAAGTCATAATTGGGTGAATCTGGCATTTTCTAAATAGT ATACAATTTGATAGGCAACCACATTTAATGGTTTCTACTCCATCTGCTTGCCTCTCTTTTTGAGTATCATGTTTGTAACT CAACATAGTTAAGGAGAAAAGTAAAGGTTAAGATATATTGTCTGTATCAGTGAAAGATAATTTGATTTAATAACTTGTCA CTTTTTTGCTTGTTTGTGAGGCAATATTTGAGCCTAAGTTTTGAACAGCAGGACTTAATGACGATATTTCTTGGTTTTAT ATCCCGTTATTTTAATTTTTGTTAAAATTTAATTAGTACACAATAACCGTGTGAATAGTTCTATACAGTATTCAATATAG TTTATCTATCTTCCTATTCATTTTTCTTCGTGAGTGCTCTATGTAGTCTGTATTCGGTAAAAGAGTTTCGATTCATTCAC ACTCATATCACTTCTATTTCTCTTTCATCTTATTTCCACTCACTTTCTTTTCATATCACTTTTTTTTCCCCATAACATTA TGTCCTTATCACTTGGTGGAAGTGGGATTGGCGTATGAGCGTTTTCCCTTGCTAAAACACCTACAATGTATTTTTTAGGC CTCAAATGGGGATCCCTGTCTTCTCATGAAAACTATCATTCCTAGTTAAAGGGTTGGACAGTGTCAATATTGGAGTTCGG AAGAAGTTTAGGTAGGAATAATGATACAAACAATAATAAAATTAAATTATTTATACATTCATATATAGACACTTGATGAA CAACGATCGAAACCCTCCAAAGAAAAAACATGTATGTATCATGTACAGAAAACAACAGAGGGTGATATATAGACTAGCGT TTAATTTATAGCTTTCATGGCTTCTTGGTAGTTCTAGCTGCAGCTGCTTGGCGGTACGCAGTTGCGTATCTATGGAATAA AGCTAGTGCATTGCTAGTGACTTCTGCTACATTCTTGGCCTTAACCTTAATTGAAGCTATCTTCTTGCTCATCCTATGAC CTGGGAAAGACTGCACACAACTGCTAGCATCTGTCAAGGCTGTGCTCACCCATGTCTCAACGTTGCTAATGTGCCACAAC ATTTTATCATTGATGGCGGAGCCAAACTTGTCCAACCGGCGTAGTTCTCGGATGGCTTGGCTAAGCTGGTCCACGCTATC GTTGATTTGATTCACACAATCTTGCACGGTTAGGTACACCTTTTTGTTCTCGATTTCCTTGAGTTCCTTGGCCATTTCCA ACAAGTACCCTCTTGTGTGCACTGCTCTAGCAAGACTCACTGACAAGGCAATATGCGCTAAGCGTTGAGGACCACCTGTG GTGGAATTTGGATTGGTGCCGAATTTGGAAAGGTAACGAATGCAAATCTCAGGGTAGAGGGTGCCCTCGCAAGATGACTC TATGTCGGTCTTTGATTTGGAATTGCTCCTTGCCAAGGATGACTCAACTTTGGCAAGACTTGAAAAAAGGAGAAAAAAGA AAATGGCAAGTGATGAGAGGTTGTGTTGTGCCATCTTTCTTGGGTCAGAATATTGAAGCTTAATTGGTTAGCTCTAAGAG AAGAGTGTTTTCAAAGCTCTAGTAGATAATTTCTTGTTGATGAACATGCCAATGGGGTGTGGTGCTTATATAGAGAGATT CTCACATCATCGCATGCATAGTTATTTTGCTTATTTCGTATGCTATGTTATTTTAAGTCCTTTATACG
CDS sequence (LotjaGi3g1v0436800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTGGTGAATCCGATGTTTCCGTAAGCACCCTTTCTTGCACCAACTGTGCCAAACCTGCAAATCTTCAGTGCCCAAA ATGCTTGGAATTGAAGCTTCCCCGTGAAGGTTCTGCCTTCTGCTCTCAGGAATGTTTCAAGTCTTCATGGAGCTCCCACA AAGCAGTGCATCTGAAGCCAAAGCAATCCTCACTTGGCACACAGAATTCAGATTCACTTGGTGAAGGTTGGTTATATTGC ATAAAGAGAGGGCAGGGTCGGACTCCAAAACTTCCTTACTTTGATTGGACTGGGATGCTGCGGCCATATCCCATATCTAG CAAACGGATTGTCCCAGCTGATATTGATAAACCTGATTGGGCTGATGATGGAATTCCGAAAGTTGAGCCCAATAGTGATC TGCAGCATTTTGTTGAGATCAAATCTCCAGATTTAATTGAGAGAATGAGAGAAACTTGTCGGATTGGAAGGGAGGTGTTG GATGCAGCTGCTCGGATTATTCAGCCTGGTGTGACTACTGATGAAATTGACAGAGTTGTTCATGAGGCAACTATTGCTGC AGGAGGATACCCATCGCCTCTCAATTACCATTTCTTCCCAAAATCTTGCTGCACGTCAGTTAATGAAATAATCTGCCATG GAATTCCTGATGCAAGGAAGCTTGAGGATGGTGACATTGTAAATGTTGATGTCACTGTGTATTATAAAGGTGTTCATGGT GATCTAAATGAAACATACTTTGTGGGAAATGTTGATGAAGAGTCTCGCCAGCTGGTCAAGTGCACATATGAGTGCCTGGA GAAGGCAATATCCATTGTCAAACCTGGGGTGCGATTCCGTGAAATTGGTGAAGTTATTAATCGCCATGCTTCGATGTCAG GCTTCTCAGTGGTAAAATCGTACTGTGGTCATGGAATTGGAGAGCTTTTCCATTGTGCTCCAAATATTCCTCATTATGCA AGAAATAAAGCAGTTGGTGTGATGAAGGCTGGACAGATCTTTACAATTGAACCAATGATCAATGCAGGTGTCTGGCGTGA TCGAATGTGGCCTGATGGATGGACTGCTGTCACAGCAGATGGTAAACGAAGTGCTCAATTTGAACACACTCTTTTGGTGA CAGAGACTGGTGTTGAGGTTTTAACAGGACGGTTGCAGACATCACCCAAAGTTTTTCCTTGGCTAAAGTCATAA
Protein sequence (LotjaGi3g1v0436800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAGESDVSVSTLSCTNCAKPANLQCPKCLELKLPREGSAFCSQECFKSSWSSHKAVHLKPKQSSLGTQNSDSLGEGWLYC IKRGQGRTPKLPYFDWTGMLRPYPISSKRIVPADIDKPDWADDGIPKVEPNSDLQHFVEIKSPDLIERMRETCRIGREVL DAAARIIQPGVTTDEIDRVVHEATIAAGGYPSPLNYHFFPKSCCTSVNEIICHGIPDARKLEDGDIVNVDVTVYYKGVHG DLNETYFVGNVDEESRQLVKCTYECLEKAISIVKPGVRFREIGEVINRHASMSGFSVVKSYCGHGIGELFHCAPNIPHYA RNKAVGVMKAGQIFTIEPMINAGVWRDRMWPDGWTAVTADGKRSAQFEHTLLVTETGVEVLTGRLQTSPKVFPWLKS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 5 | 56 | 52 | 9.9E-7 | – | |
| SUPERFAMILY | 10 | 55 | 46 | 4.71E-5 | – | |
| PANTHER | 11 | 395 | 385 | 6.0E-186 | – | |
| PANTHER | 11 | 395 | 385 | 6.0E-186 | – | |
| Pfam | 15 | 58 | 44 | 1.8E-15 | ||
| SUPERFAMILY | 92 | 383 | 292 | 3.4E-91 | ||
| Gene3D | 94 | 393 | 300 | 1.3E-134 | ||
| Hamap | 138 | 384 | 247 | 39.888 | ||
| TIGRFAM | 139 | 383 | 245 | 6.4E-91 | ||
| CDD | 146 | 382 | 237 | 2.6919E-147 | ||
| Pfam | 147 | 375 | 229 | 1.2E-53 | ||
| PRINTS | 203 | 216 | 14 | 2.4E-19 | ||
| PRINTS | 225 | 241 | 17 | 2.4E-19 | ||
| PRINTS | 295 | 307 | 13 | 2.4E-19 | ||
| ProSitePatterns | 301 | 319 | 19 | - | ||
| PRINTS | 326 | 338 | 13 | 2.4E-19 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Aminopeptidase activity | Catalysis of the hydrolysis of N-terminal amino acid residues from in a polypeptide chain. | ||
| Biological process | Proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. | ||
| Molecular function | Metalloexopeptidase activity | Catalysis of the hydrolysis of a peptide bond not more than three residues from the N- or C-terminus of a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions. |
Expression pattern of LotjaGi3g1v0436800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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