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LotjaGi3g1v0438100.1

Overview

Field Value
Gene ID LotjaGi3g1v0438100
Transcript ID LotjaGi3g1v0438100.1
Lotus japonicus genome version Gifu v1.2
Description Adenine nucleotide alpha hydrolases-like superfamily protein; TAIR: AT1G11360.1 Adenine nucleotide alpha hydrolases-like superfamily protein; Swiss-Prot: sp|Q8VYN9|PHO32_ARATH Universal stress protein PHOS32; TrEMBL-Plants: tr|I1LUA5|I1LUA5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0438100
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:85123955..85130012) extracted from Lotus japonicus Gifu genome v1.2.

TTTGGTTCTTATAAAAAGGACCAAGATTTTTCTTCTCTTTCATACTTATAAATAGGACCGGAGGGAGTAATCCGTTATCT AATCAAGCAATTAGCAGTTGACAAAGAAACAAGAACGTAATCCAAAACGGATGAAGTAACCTTTTTAAATAACTAATCAA TGCTTGACTCTTCAAAACACAGAAGAACGAAGCAACTTCAGAACTTCAACAAACGACATGAAACCGCAACCACCGGTCCG GTCCGAACCGGAGCATCCGGTTCCGACACTCTCCCCTCGGTTCACCTTCACCCTCGCCTCCGGTTCCCACCGCAAGATCG CGATCGCCGTTGATCTCAGCGACGAGAGCGCCTACGCCGTCCGATGGGCCGTCCAGAACTACCTCCGCCCCGGCGACGAG GTCATTCTCCTCCACGTCCGCCCCACCAGCGTCCTCTACGGCGCCGACTGGGGCGCCGTCGACCACAACGCCGAAGATGG CGACGGCGGAGACTCTTCGGAGGAGTCGCGGCGGAAGCTAGAGGATGATTTCGACAACTTCACCTCGACGAAGGCGAGCG ACCTGGCGGAGCCACTGGTGGAGGAGCAAATCCCGTTCAAGATTCACATTGTGAAGGACCATGATATGAAGGAGCGGCTT TGCTTGGAGGTGGAGAGGCTTGGGCTCAGCGCCGTCATCATGGGTAGCCGAGGGTTTGGTGCTTCCAAGAGAGCCGCTAA GGGTAGGCTTGGGAGTGTCAGTGATTACTGTGTTCACCATTGTGTGTGTCCTGTTGTGGTTGTGCGGTACCCTGAGGAGA ATGATGCTGGTGGGGTTCATGGAGGAAACGACAGTGTTAGAGTTGGGGAACATGTAGAACTCCACCCTGTGCCTGAGGAA GAGCACGAGGAGTACCATGATGCTTCGGATGAACAGAAAGGTTTGCCTCTTCAACCTATGTTTAGCAAAATCACTATAAT TGTTTAATATTTTTAAGATATAATTATGATAATTGTTTGCTTAATGAGTTTGTTTTTAACTTTTCATCATTGTTCAATTG ACCTGGATTGCTACTTGGTTTTGGTTTTTGTGAAATGATTACTTTTGGTTTGGTCATGTTGTTTTCTTTGTATTTTTTGT TGTGTTTTTTTATGTGTGCTGGGGTTTGGCATTTTGCAATGAGAACAATTGTGTGAGTAGGTGGAAGAAGAATGCCATCA CTTTCACGGTATTATGAGTTAATTTTGCATAATGTTGGTTTGTGGCCTCTTCAATCGACATAGAAAAACAAAATTCTTCA TTAAATACAAAGTTACTTTGGTCCCCATAAAATTTCAGTATTGATTATATTAGCACTTAATTGATTGTAGTCGCGTATAT CTGTTTTTGCGTTGATGCAAAAGCAAAAATGATTTCATGTATGTACAAACGGAGAAGCATGAATCTGCCATGTGAGTTTA ACGTGGATCTGTGAAGTAAGGTTTTGCCATTTCGAGCTCAATGTGGATCAGTCTTGAGTTCAACGGCAATCAGAACATAC ACTTAACCTGTGGGGACTTGTCAAGGACTGAAGAGAAGATGAGCATTGATTGCTCTTGAACTCCACAAAAGATTACTTTG TCACATAAATCATTTCTTACATTAACAAACTGCAATTTAGGATGCACATGTCACTATTTACTCTCTTTATTTGCCTTGTA CAACCAATACCCCATGACCAAGCCAGATCTTTTCTATACCTTCCTTAACAACCCAAAGTTTACTGGTTTACCTGCAAAGT AAGAACTTCACAATCAGCTATCGTGTACAAACCTTTCTTACACTTCTTTATACATTACTATCTTCCATAGGCAAGATGCT GAAACCACCAACACTTCTTATCCCCGATTGTAGTCCATTGCTAGAATTCAGATTCATATCAAAACACAACTGTGTACCCA CAACTTGTTGGCACCACTGCTGTTGCGCTTCTATGGCCTATATATTAAATTCAAACCCACACCACATGCAGCACATTCGC TAGCCTCACTGCTGTCATATGGTACCAAGCACTGTGAAACCATCGTAGCAATTACCTAGCACGACAGCCAGTCCCAACTC GGAACCAGCACACTTAGCTGCAATCTTCTATGGAAGAACCACCTTAACTAAGCATTGCCACCCGACATATTGCCCCTGCA TCACATTCCCAGATGAGCCAAGTATTTGGAAACACTACTACAACTTTTCTTGCCACCATTAACCAGCACAATGATGCTGC CTGGACTCTTTTTCTCCTCAGTCCTATTGCTAAGGAGCATAAAACAGGAGCATCTACCACTTTTATTTCCTTACTTGCGA TTTTGAATGGCCTTTTGAATTATCTTTTTCTTATTAATATTGAGTGACACCCAGCCCTTCGGCATTGGTTTATTTTGAAC TTTCTTTTAACCAGCCCTATGATATTGTCAAGTTTTTTCACAATTAAGTGGATCCTGAATCCTATGGCACATAATGTGCC ATGGGTTATCTCTGTCAATGTTAACCAATGCTTTGTTCATGCAAGGGCTGATTTGATTAATGGATTAATCTTCCAATAAC CTCCAGGGCAATGGCTAATTACTCTTTCTCGCCAAATACTATTCTTCCTTACTTGTTTAGTTTTTCTTTCTTTGGGTCTT TGTGATAACTGATAAGTCTTGCCTGTGGTGCTTATGTCCATATTGTTGAGTTGTCTATTAAGAAATATCTATTAGGATAT ATCTTTTTGAGATAGGTTTGTTAGGGTTAGGTTTCATATTGCTATGATAGATTAGGATAAGATAAGATTTTATTGTATTG AAGTTAGTAGTTGACTAGAAATCCTCTAGGAATCTAGTCTATAAATATTGTGCTTCTGAATTAAGTATTAATCAATAATC AATGATTCAGAATTCTTTCAGTTTTAGCACATTACCTAATTAGCTCTTAATCATTAGTTTGATGATTTTTCTTTAGTGAA TTGTATTGGATTTTTCTGTTCAAAACATGAAAAACTAAGGGGACATGATGGGGATAAAAGGGCATGCACAGTTGGGTTAA GATTTGGTACAAGAGCAAAATAGAGGAGGAAAAGGATAGGTAAAGGAGATCCTAGGGCCTAGACGTCTTGCTTTTTGTTA GCAGCAGTGGAGATCGTCAAAATGCCTTATATATAGCTTAGATACTGCGATTAAAACTAATCCCAACCCTTTGAATAGAT CTAATCCTAGGACCTAGATATATAAAAGTCCTTGAAGAACAAGAAACTGAAGATCCAAATCAAATAATAACATCACTACT GTTCCTACATGTTATGGACCTTAGCATAGAATCTTGTCATGGGTTTGGCCACGGAGGAATCCTTCTTGCGACCTATATTG AACAAGAAAATAGACTCATCCTTGGCACAGCCCCTTCTAGTTGTACAGAGAATAATTTATTGTTGTTTCATTGACTTCTG GAATCCCTTTTTATAGGGCTGTAATACAGAAAATTAATAAAAAAACAGGATCCTAGCTAATATGGAAAGAAATATTAACA TTTTATCTAATAAGCAAAGAAATCATGATCTAAAAATCTCCTTCTAAAAAATAATTAGCCTATTACCGAAACAGAATAAA ACAACAAGAAAAAGGAAATCAATCTTTTTTTCTTATTAATTTTGGAAACTTATTCTAGTGCGTCTCTGATATGTGCGTCC CACAAAAGCATCCATATTATTGTACTTCAATAGCATGAAGGATACTCATGCTTCATGAGCATGAAGAGTACTGATCAACA GACAACAATGGCCCAAACAGTACCCTTACTTTTTAGATTATAAATAATAATTGAGCCTTTTTCATGCATCAGAAAACTGA TTCCGTTATCTCTTTCTCATGCTAAATTCAAACTCACGTGCATTTGCATTGGATGTGTGATAGAATTGCCAGTTAGTTAT CATTGGACTTTTGAATGTGAGTTTTGCATGTAGTTTACTCAAATTTGATGGTTTGACACATGCTTAATGGTGGAATTGTG AGGACCAACAACCATAAATGATAATATTTTCCTCTTAATATATTCAGCTCTGCACGAAACGAACATTGCTACCAGACGTC ATTTATTTTGTTGTTGTCTACCTTGGACTCAATCCAACTCTCATCCTTGTTATCATTTAAGCATTTATGTTTAAAATCAT ATCCATAACTTGCGTGACACTGATCTTTTTTTTTCTTTTTTACATACTTGCGCGACACTATGATTTTTTTATTCTTTTAT ACATGAGCTCTACAACATAATTCTTGAACTTAAGAGGTTGAAGTTACTAAACTGAGCTGAGGTTGATTCCCATTTGAAGT TACCTAAGAATAAAAAACGTTGCTAGAAGGAAATACCGAACCAAAAGTTGAATCCTTAAAAGTTTTCTTTTGCTGTTCTT TAAGCTCTGGATTGACATGCTATCTGTTAAAGGGATGTTTTCTGTAGTTGTAAATGAAAAGAATATGAAATTATTTTTGT TCATAGAGGCCATCATATTATGGAATATCCAAAACAATGTATGATTGCATAGTGCATCTATTAATAGAGTACACAAGCTG TAAAATTGTATATTATTACAGTTTGATTGGTTTCTTTTTTCTTAACCTATTTACTTTTGTTGTATGAACAGATGCTTAAT GAGAATATAGAGCAATATCAGTATCCTACTAACTACAGGTGATGTAATAACATCTGCAGTTTTTCAATAGCAATTTGATC TTTCCTTTTTAAATGTATTATTGGCTTATTGGATAGAACCCTATATGTCGTGATTTCCATTAGGAAGGCTTAAAAGTACT TATAACGGAAATTCATGTCTTGTAATGAATTGAAATATAAGTGTTTTCTACTGTTTGTATCGAGAATCCATATACAAATG ACAGTGATGGATTACTGTTACTGCTTTTGGTGCTCTTTTACCATTGGGGACTTGGACATTTGGGAGTGTTATTCCAGGTC CTTACCTCTATACTATTTTTCAAGGGACTTACTTGGTTGGAATGTTAAAAACCACAACCAAAAGGTTTTATAGAACTTCT TCCAACTGGGGTGATGTTTCTCTTCACTAGCAACTACCAGATTTTTCCGTAAACAAAACTTTCACATATTGATGAGTATA TTAGTATTACTATCTTCTGAGCTGCTTTATATATCATGACATATACGTTGAAATTTACAGGTCCTTTGTTTTGTTTTTTC AGAAACTGGTCACAGCATCTAGAGTTCTAGACTTATGTCAAATTGAGAAGAATATAAAATTGGGAAGCCTCTTATTTGGA CAGACTTATACTGTAAAGCGGTTATTTATTGGTTAAAATTTGTATGTTTTGAACAAGTTTGCAAGAAACAATGAATGCTT TATATTTATGTTTGTCTTGTAAATATACATATGCTACTCTTGTATGATTTATGCGGAAGGAAAGTTGGATTATGAGTGGA TGACCTTGGACGATGGTCGATGGCAAAAAAAAATACATTCCAGACTTGTTGTGATGGTTCATCATGTTTTAGTATGTTAT AAGAAAACAAAGGTTTGGGGTATTGCATAAATACTATAATTGAAAATTTGATGATACTAACTGAGAACTACGGGTGAGTT TTTGGTTTAACACTTCAAAGAAACATTGGTTTGGCGGGAAAGTCTCATGAGTTGGTGAAGGATCGAAATAGGTTTTTGGT GAACTCTATATAGCGATGAAAATAGGTTAGATTCAATTGAGTTTTCAAGGTTAAGTTTGATCTACTTTATAAACTTATGA CTCTGATCTTATTGTGTTGGCCTTAATTCTGAAGTTTGATTTGTTTTTAAAAGTATAGTGTAGTCTTGTAGTTTATTACT GCTAACTTGAGAAAACTTCAAAGTTTAACGCTTTGAGAGGATCTTGACCTCCTGTTGTGCAATAGGAAAGTTCTTGAGAG TAATAGTAAGACCCATAAATTTATAACATTGGAAACCTTTTTTTTTTTGAATATAACAATATGCCATCATTAGTTCGAAA TCAAAATCTATTTTGAAAAATTAAAATTGTAAAACTTGAAATTAAAAGCAGTCCAAAC 

CDS sequence (LotjaGi3g1v0438100.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGAAACCGCAACCACCGGTCCGGTCCGAACCGGAGCATCCGGTTCCGACACTCTCCCCTCGGTTCACCTTCACCCTCGC CTCCGGTTCCCACCGCAAGATCGCGATCGCCGTTGATCTCAGCGACGAGAGCGCCTACGCCGTCCGATGGGCCGTCCAGA ACTACCTCCGCCCCGGCGACGAGGTCATTCTCCTCCACGTCCGCCCCACCAGCGTCCTCTACGGCGCCGACTGGGGCGCC GTCGACCACAACGCCGAAGATGGCGACGGCGGAGACTCTTCGGAGGAGTCGCGGCGGAAGCTAGAGGATGATTTCGACAA CTTCACCTCGACGAAGGCGAGCGACCTGGCGGAGCCACTGGTGGAGGAGCAAATCCCGTTCAAGATTCACATTGTGAAGG ACCATGATATGAAGGAGCGGCTTTGCTTGGAGGTGGAGAGGCTTGGGCTCAGCGCCGTCATCATGGGTAGCCGAGGGTTT GGTGCTTCCAAGAGAGCCGCTAAGGGTAGGCTTGGGAGTGTCAGTGATTACTGTGTTCACCATTGTGTGTGTCCTGTTGT GGTTGTGCGGTACCCTGAGGAGAATGATGCTGGTGGGGTTCATGGAGGAAACGACAGTGTTAGAGTTGGGGAACATGTAG AACTCCACCCTGTGCCTGAGGAAGAGCACGAGGAGTACCATGATGCTTCGGATGAACAGAAAGATGCTTAA 

Protein sequence (LotjaGi3g1v0438100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MKPQPPVRSEPEHPVPTLSPRFTFTLASGSHRKIAIAVDLSDESAYAVRWAVQNYLRPGDEVILLHVRPTSVLYGADWGA VDHNAEDGDGGDSSEESRRKLEDDFDNFTSTKASDLAEPLVEEQIPFKIHIVKDHDMKERLCLEVERLGLSAVIMGSRGF GASKRAAKGRLGSVSDYCVHHCVCPVVVVRYPEENDAGGVHGGNDSVRVGEHVELHPVPEEEHEEYHDASDEQKDA 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER 8 234 227 2.3E-112
PANTHER 8 234 227 2.3E-112
Gene3D 24 199 176 1.8E-30
PRINTS 31 49 19 8.7E-9
SUPERFAMILY 32 193 162 3.43E-27
Pfam 32 190 159 4.5E-29
CDD 33 177 145 2.05692E-19
PRINTS 168 190 23 8.7E-9
MobiDBLite 217 236 20 -

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0438100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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