Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0438700 |
| Transcript ID | LotjaGi3g1v0438700.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Equilibrative nucleoside transporter; TAIR: AT4G05120.1 Major facilitator superfamily protein; Swiss-Prot: sp|Q9M0Y3|ENT3_ARATH Equilibrative nucleotide transporter 3; TrEMBL-Plants: tr|V7BVC4|V7BVC4_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0438700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:85177713..85184551) extracted from Lotus japonicus Gifu genome v1.2.
CTCAGATTCATATCGATTGTTCCTGAATAATAGTTCAAGGGTTAAGAATTTAAAGTTACGAGATATATGAGTTGGGTGAG GGAAATTTAGATATCAATTTGTAAAGTGCAATTTATCTGTAAAAAAAAACAAAATTCAAATTGATGTCATTGACAAAAAC GTGGAATACAACTTTGCAACTTATCTGTTTAGCCCATGATGACGCAACTGCATTAATATAGTAGTAACAGCACAGCCACA CCACGACACAATTCAAAGTTTTGAGATTCTTCTTCTTCCTTGCATTCTCTTCCTCTCCTCTCAGCGAGTCTCCATTTTGG GTAACCTCTTCCTCTCTTTAACTATTATTATTTTTTCTTTATCAGTCTATTTAGGTGCCATGGTATTGCTATTTTTATTT TTGTTATTATTGCTTTGCGAAAGATATATACTACTCCTGTTCGTTTGTTTCTCTTACTTGCTGTTGCTGCATATTGTCTC CACCCAGTTCATCATCACGTGGAAGATGGAGCAATTTTAGTAGCAATACCTGCAAATACCCATGTGTTTGTTCTTCTTTT ATTGTTAACTTTAATGCCTGCGCTGCACATGAACAATGGACAACATTGTGATCGCCGTGACCTGCTCATAATTTTAACCT AAAATAATGCTTTGACTTGAGCAAATTCATTAAATTTATAAATTCCATTTTTATATATCTAAGATAATCTAATGTTGCCT TAATGCCTTCAGACCAATTTTTTCTTTCCAAAATAAGATTGACTTTTATTGAGTCATTATTTCTATTCAACAACCAGTCG CATTGGTGTGGTTGTTTGAATCCGTAGGTCAAAAGCTCGATTCCCGAGAGTCGTATTCTTGGGACACGTTAGACCTTCAC CACATGTGGATCAAAATTGCGAAAACAATTTTCTATTGCCTCTGTAGGCACTTTCTCTTCCTTTTATATGCTAAATATCT CTATTTTTTGTGTAATACTTTATCATTCTATTTCTTTAGTCATTATTCTGGACTCATATCTCAAAGTTTACAAATGCCAT TCTTTCATTTTCCACTCATATCTACTTCTCTGCTACTATATATTTCAACTTCATCATGTACACATAGAATCCTCACCTTG GTTTATCTACTCTCTTGTAGAGATTCATTAAGAAGTAGCATCCTCCGCCATGGTCAACGGTGAGCTTCAAACACCAACAC GTCTTGAGGTTTGTGATTGGATCCATTACTATTCACTACTTTAGCTTATGGAAGCTAAGTGAATTATGTTCTTAATTTCC ATGCTTTTTATATAACAGGGAAAATATGCTGCAATAATTGTCTGCTGGCTTCTTGGCAATGGATGTCTTTTCTCATGGAA CAGTATGCTCACAATAGAAGATTACTACAAGAAGTTGTTTCCGGTAATTGATGTGTATTCATTTCTCATGCTTACTTTCA CAGCTGTTTGCAAAATTGACACAAAGGCACAATTCCAATTTGTATCACTTCCTTGAAATATATATATATATATATATATA TATATATATATTACTTTCCTGTCAAATTAAACTTCATGTTCTTTTGTTTTGAAGAACTTTTTACACTCAATTATGTGATT CAGATGTTGTAATTTTCTAATAATAGAATTGCCTGGGACTCTTGGTAAAGAAATAGTTTAATTTCTTTTTCTCCTTGTGC AGAAATACCACCCCTCCAGGGTGCTTACTCTGGTATATCAGCCATTTGCAGTTGGAACACTTGCAGTGCTGGCTTATAAT GAGGCAAAAATCAACACACGAAAACGGAACCTACTTGGATACACTCTTTTTTTCATAACCACTCTGTTGGTGTTAATTGT AAGTCCAATTCACTTGTTTGTGAACTTTGATTCCTTTAGCATGGTTTTGATTTTATATATGTTTCCAACCAATCTTCCGT TCCATAGTTGGATTTAGCTACATCTGGAAAAGGAGGACTTGGAACTTTCATTGGTATATGCGCAATTAGTGGTGCTTTTG GAGTTGCAGATGCTCATGTTCAAGGTGGAATGGTGGGAGACCTGTCCTACATGCAACCAGAATTCATTCAGGTCAGCATA AGTGATATAATTAGTATTACTATGAAGTTATTGAAGATATGAATTTAATTGCCACTCTATTTTATTGTTACAGTCTTTTC TTGCTGGCTTAGCAGCATCCGGTGCATTAACCTCTGCTTTGAGGTTAATTACAAAAGCAGCATTTGACAGTTCTAAGGAT GGTCTTCGAAAAGGAGCTAGTAAGTTCAACTCTTCAATACCTGAGAAATAAATCATTCTTCTCTTCTTTTTGTAATTGAT TATAACTTATAAGTATAATAAAGTATAAACTACTATAGGCTGCTTGCCAGCAGTCTCAACATTTCTTCATTTAGATACGT TTATGCTTGACTTTAGAACAGTTGTAACTTCTGTTCTGTACTGATTACCAACTTCACTTTTTTTGTCGTCAATTAGTCAA GAATATGCCTGCAATATGTTTGTTGAACCTAACATTCAATTCATGAACATATGTATTCTTATGTTGTTGTTTTAACATAA ATAAGATAGACACATAATTCCTTCTGTTTTGGTAAAGACAGTAATCCCATTTCTGCTGATAGGGTGTTTGGTACTTTGGT TTACCTTTTACAAACCAATTTAGATTTCAAAATCAATTTTAGCAAGAAGAACAAACTTTAGCTTGTGGATAGAACTGTAT TGGCTTTTGTACCCCCCACTCTACTAAACACACGCTGAGTCCTCCATTATCGTTTTTAAGTGAGATTCTTAGATGGATAC TTTTAGTGCCATGTTATCACAATGTAACGTGCCTTATAAATTTGAGGTTGCTTTTTTATTTAGATCAGCAATATCAATTT CTTCTAATTCATTGAAGTTCTGTGGTGCTGGTTCGATTTATTGTTCTTCGCTACCATTGAATTACATACAACTATGACCA TTGTCTTCACTTTCCATACTATTTTTTTTTTTTGATAGGCCTTTCCATACTATTTAGTTACTGATCACTTATCATGCCAT ATTGTCCTTGCAGCTTTACTATTCTTTGCTATATCAACATTCTTTGAGCTTTTAATGTATTCTTTATTTGCTTTTAGTTC CATGTCATTACAATATAATATGCCATATATACATACATTTGAAGTTATTTGTTTGTTAGATCAGCAATGTCAATTTCTTC TAATTAATCGAAGTTATGTGATGACGATTCTATTTATTGTTCGTTGCCATTGTACTATACAACTATGGTCATTGTCTTCA CTTCCTGTACTATTTAGTTACTATCATTTATCATGCTATACTGTGTTGCAGTTGTATTTTTTGCCGTATCAACATTCTTT GAGCTTCTGTGCGTTCTTCTCTATGCATTTGTTTTCCCCAAACTTCCAATTGTGAAGTACTACCGATCAAAAGCAGCATC AGAAGGATCCAAAACTGTTTCAGCTGATCTTGCAGCTGGTGGCATCCAGACATTACCTGAAGTGAGCACTGTTTCTTTCT TCTTTTTCACTTTCCAATATGTATCAGAACTCTTTCACTGTTTAACATTCAGCTCATGCTTTAAGGATTCTTTTTCCAGG GCGAGGAATATGAGAAAGGACAAGAGCGGAAGGGAAACAAACAATTGTTATTGGAAAACATTGATTATGCACTTGATATA TTCCTAATATATGTGCTAACCCTCTCAATTTTTCCTGGATTCCTTTCAGAAGATACAGGATCACACAGTTTGGGGTCCTG GTATGTTCATTACAAAACAATAGGCCAATAAATATGTTTTTTGATTATATGTGTAACAGACTAACAGTTGATGTTAATTT CCTGTTGTTTGTTTCAGGTATGCTCTTGTTTTAATTGCAATGTATAATGTGGGGGATCTGATTGGAAGGTACATTCCACT CTTGAAATGCGTGAAGTTGGAAAACCGAAAGATGATCACGGTAGCAATTCTATGTCGTTACTTGCTTGTTCCAGCATTTT ATTTCACTGCAAAGTATGGTGACCAGGGGTGGATGATAATGTTGACATCCTTCTTGGGGCTATCCAATGGTTACCTTACT GTCTGTGTTATGACATCTGCACCCAAAGGCTACAAGGTGAGTCAGTTGAAGTATTAAATACAAGTTTCAGACTTCAGTGT CATTGATATAAACTATAAAGCACTGAGATATTAATTTTCATGTTTTGGTTTTTTATAGGGTCCAGAACAAAATGCTTTGG GAAACCTATTGGTGTTGTTTCTTCTTGGAGGTATTTTTGCAGGGGTGACACTTGACTGGCTTTGGTTAATAGGTAAAGGG TGGTGACATCTCAATCATGACAGGGTAGAGGAATGGTTATGAGGCTTTCTTTGTAGAAAAAATGAAAAGCTTTCATAGTT TATAGCATATTCTTTTGCTAAATTAAAAATAATGAATTGGTTAATTTTGGTGTTTCATTCCCTTAATATAACATTTGGTT AAGAAAATTGCTCTCTCGAAGATAGTCTACGACTTTCAACTTCTGTTAGATGATCACATTTTCTTTGTACCATTTATATT TTTTTTGCTGGGTTTGAGACTATTTATATGTGGTTCAACCACATTCGAATTTGTAACAGAATTTGTATATTCTTTCGTCC TCGTTTAGGAATGATATCAATTTAAACAGTCAATGAATCAAGTTATCTGCATATTATATCAAGGCTGTAACTTGACAACA TTGATAATTGATAAATCATCCAATTCGACATGTTTAATTGTTTCTTAGTGTAACTTGTAGTACATACATATTTGTATACA ATTTCAACTTTCTAAATCCAAGCCCAATTGCACATCTTCCATTTGGGCTTTCGTATGTGTTTGGGGGTGAGACGAAGACG TTTGTTTTGCTTGGGAATTCCCTGATGGTCTTGGTGCAGTTGTCTGCTAGTGACTTCTTAGGGGGAAGAAGGAAGATGAG AGACTAGATGCTATTAAAATATTAAAATTGATGTGAAAAACAAAGAGCTCTTCATAGTTAATAGTTAATACTTAGCACAG GTCGGTTTCGGGCGGGCTCGGGTGAAAGATGTCGGGTTTGGGCAGTTTTGAACCAAGCATATATCAAACCATTTTCAACC GTGGAAGCCTCGGATATTTCGGGTGCGGGTTGAATCGCTAAACGGGTTGCTCGGGTGGGTTGAAACGGTTTTGGAGTAGA TTGTGTTTTCTGGTTTTTGTTGAAAATTTCAAACAAAAATGGAGAAAGAGGGAGAAAGAGAGAAAGAAATCAACAATCAT ATGTAAAGGTGGCTTGCGGTGCTGGACTAGGGAATGAAAAAGATGGAGTGGTGGAGGGTGAAGTTGGTTTATCCCAGAGT TGGAGAAAACTGAAGATGAGTAGTAGAACTTGGAAGACTCTTAGCGTGAAAAGGAAAGCAAAAAGTGTGATGGGGCTTGG ATTAGAGTTTTGTTGAGATGAATCAGAGAGAAGAGGAGAAGAAAGTGATGAGCTGATGAGGGTAGTGAGAGAAACGAAGT TGCTTTAACTTTACTCATTGCTGTGTTTAGCATTTTCAAATAAAATAAATCTTTAAAAGACAAGCTTTGGAAGTGATGTG CAAAAGGTACATTTATTTATTCATTTCAATGGCAATTATTACTCCCTCTGCACTATGCAGCTTTGGTGCGCAGAAGTCAA AAAAGCACATGCTATGATAGTAGATTTCAAGCTAGCTACCAATTTTAATTAATATTTTATCTACTTTGGTTCTGTTCGGG TTTAGATGGTTTTTAAAAATTCAACCCGGACTCGACCGTATCTACCCATCTGGAACCATAGCAGCTCAACCCATTCCAAT GCATCCGACCCGAACCGCCCGTTAATGCAGTTTTTGACTCGGTAAAGTCGGGTTTGGGTCGGGTCAAATAATCATGCTCA ACCCTAGTTAATATAGTTAGTTTTAGTTAGTGATTAGAAAAAGCAAAGTTAGTTGTTAGTCTCCATTACTATTCTGTTAG CTACTAACTCGGTATTTGGTTGTAATCTAAGATGATATAAAATGTAGCTCATTCCCGTCCTTAGAGACTAACGTTCAATA CATAAACATTACTATGATTCCCAAATTCAAGAGGGTATCCCTTGACAAAAAAATAAAATAAAATTCAAGAGGGTACCAAA ATTGTATTTTAGATGCGTGGAGACTGCTCATATATTGATCACCTTCAGAGGTCTTACCGTGGATGTGGAGGATGTCGTGA GAAGTCCAACATTAACAACATATAACATGCACGAATGAGGCAAAACATTAACAATCAAGCCAAGCTAAACTATGTTGATT CAATACAAATAATAGAATATTATAGAGTTTTTCTTTAACTTCTAAAACACTTTTTAAATTATTTTCTTTTGAAAGGAAAT TATTTTTGATCATAGTAAACTAATCTTTGTATTCTTATTTCAATAATGATTATGATAAAAAGAAAATGTAACGTCTTCAG TAGACATGCCAAGTCAAATAACTGACCGTTACTCATTCACTCTCCGTTCTGAATCGCCTTCGCCGGCGTCTTCCCAGTTT TCTTCTTCTTGTGTTTGCATTCTGAATTAGAAGTTTCAGCAAATCTTCATGACTTTGAGAGGCTGGCACCCATCGTTGTT CTCTGAGATTTGGGACCGGATTCAAAGATGTCGAAGGAGGAGAGCCAAGTTCGAAATTTGAGAATGAAGCAGTTTCGTGG TGGTCCTGGGTGGGTGGCCGGAAGTGGAGCATGGGTGGCCATAAGTGGAGTAGGGTGAGTTCTTATTTTAAGAATGATTG CTTAATTTTGTTGTCCTTTCGAGGATGCCTTTATGAAAT
CDS sequence (LotjaGi3g1v0438700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTCAACGGTGAGCTTCAAACACCAACACGTCTTGAGGGAAAATATGCTGCAATAATTGTCTGCTGGCTTCTTGGCAA TGGATGTCTTTTCTCATGGAACAGTATGCTCACAATAGAAGATTACTACAAGAAGTTGTTTCCGAAATACCACCCCTCCA GGGTGCTTACTCTGGTATATCAGCCATTTGCAGTTGGAACACTTGCAGTGCTGGCTTATAATGAGGCAAAAATCAACACA CGAAAACGGAACCTACTTGGATACACTCTTTTTTTCATAACCACTCTGTTGGTGTTAATTTTGGATTTAGCTACATCTGG AAAAGGAGGACTTGGAACTTTCATTGGTATATGCGCAATTAGTGGTGCTTTTGGAGTTGCAGATGCTCATGTTCAAGGTG GAATGGTGGGAGACCTGTCCTACATGCAACCAGAATTCATTCAGTCTTTTCTTGCTGGCTTAGCAGCATCCGGTGCATTA ACCTCTGCTTTGAGGTTAATTACAAAAGCAGCATTTGACAGTTCTAAGGATGGTCTTCGAAAAGGAGCTATTGTATTTTT TGCCGTATCAACATTCTTTGAGCTTCTGTGCGTTCTTCTCTATGCATTTGTTTTCCCCAAACTTCCAATTGTGAAGTACT ACCGATCAAAAGCAGCATCAGAAGGATCCAAAACTGTTTCAGCTGATCTTGCAGCTGGTGGCATCCAGACATTACCTGAA GGCGAGGAATATGAGAAAGGACAAGAGCGGAAGGGAAACAAACAATTGTTATTGGAAAACATTGATTATGCACTTGATAT ATTCCTAATATATGTGCTAACCCTCTCAATTTTTCCTGGATTCCTTTCAGAAGATACAGGATCACACAGTTTGGGGTCCT GGTATGCTCTTGTTTTAATTGCAATGTATAATGTGGGGGATCTGATTGGAAGGTACATTCCACTCTTGAAATGCGTGAAG TTGGAAAACCGAAAGATGATCACGGTAGCAATTCTATGTCGTTACTTGCTTGTTCCAGCATTTTATTTCACTGCAAAGTA TGGTGACCAGGGGTGGATGATAATGTTGACATCCTTCTTGGGGCTATCCAATGGTTACCTTACTGTCTGTGTTATGACAT CTGCACCCAAAGGCTACAAGGGTCCAGAACAAAATGCTTTGGGAAACCTATTGGTGTTGTTTCTTCTTGGAGGTATTTTT GCAGGGGTGACACTTGACTGGCTTTGGTTAATAGGTAAAGGGTGGTGA
Protein sequence (LotjaGi3g1v0438700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVNGELQTPTRLEGKYAAIIVCWLLGNGCLFSWNSMLTIEDYYKKLFPKYHPSRVLTLVYQPFAVGTLAVLAYNEAKINT RKRNLLGYTLFFITTLLVLILDLATSGKGGLGTFIGICAISGAFGVADAHVQGGMVGDLSYMQPEFIQSFLAGLAASGAL TSALRLITKAAFDSSKDGLRKGAIVFFAVSTFFELLCVLLYAFVFPKLPIVKYYRSKAASEGSKTVSADLAAGGIQTLPE GEEYEKGQERKGNKQLLLENIDYALDIFLIYVLTLSIFPGFLSEDTGSHSLGSWYALVLIAMYNVGDLIGRYIPLLKCVK LENRKMITVAILCRYLLVPAFYFTAKYGDQGWMIMLTSFLGLSNGYLTVCVMTSAPKGYKGPEQNALGNLLVLFLLGGIF AGVTLDWLWLIGKGW
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 15 | 15 | - | – | |
| PIRSF | 7 | 413 | 407 | 1.2E-83 | ||
| PANTHER | 7 | 413 | 407 | 5.1E-234 | ||
| PANTHER | 7 | 413 | 407 | 5.1E-234 | ||
| Phobius | 16 | 35 | 20 | - | – | |
| TMHMM | 17 | 39 | 23 | - | – | |
| SUPERFAMILY | 19 | 408 | 390 | 1.24E-6 | ||
| Phobius | 36 | 54 | 19 | - | – | |
| TMHMM | 54 | 73 | 20 | - | – | |
| Phobius | 55 | 73 | 19 | - | – | |
| Phobius | 74 | 84 | 11 | - | – | |
| TMHMM | 85 | 107 | 23 | - | – | |
| Phobius | 85 | 104 | 20 | - | – | |
| Phobius | 105 | 109 | 5 | - | – | |
| Phobius | 110 | 129 | 20 | - | – | |
| TMHMM | 111 | 133 | 23 | - | – | |
| PRINTS | 124 | 146 | 23 | 9.2E-5 | ||
| Pfam | 125 | 409 | 285 | 5.3E-37 | ||
| Phobius | 130 | 149 | 20 | - | – | |
| TMHMM | 146 | 168 | 23 | - | – | |
| Phobius | 150 | 172 | 23 | - | – | |
| PRINTS | 152 | 172 | 21 | 9.2E-5 | ||
| Phobius | 173 | 183 | 11 | - | – | |
| TMHMM | 183 | 205 | 23 | - | – | |
| Phobius | 184 | 205 | 22 | - | – | |
| Phobius | 206 | 262 | 57 | - | – | |
| TMHMM | 256 | 278 | 23 | - | – | |
| Phobius | 263 | 282 | 20 | - | – | |
| Phobius | 283 | 293 | 11 | - | – | |
| TMHMM | 293 | 315 | 23 | - | – | |
| Phobius | 294 | 314 | 21 | - | – | |
| Phobius | 315 | 325 | 11 | - | – | |
| Phobius | 326 | 345 | 20 | - | – | |
| TMHMM | 327 | 344 | 18 | - | – | |
| Phobius | 346 | 350 | 5 | - | – | |
| PRINTS | 350 | 366 | 17 | 9.2E-5 | ||
| Phobius | 351 | 375 | 25 | - | – | |
| TMHMM | 354 | 376 | 23 | - | – | |
| Phobius | 376 | 386 | 11 | - | – | |
| Phobius | 387 | 410 | 24 | - | – | |
| PRINTS | 387 | 411 | 25 | 9.2E-5 | ||
| TMHMM | 389 | 411 | 23 | - | – | |
| Phobius | 411 | 415 | 5 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleoside transmembrane transporter activity | Enables the transfer of a nucleoside, a nucleobase linked to either beta-D-ribofuranose (ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleotide) from one side of a membrane to the other. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Nucleoside transmembrane transport | The directed movement of nucleoside across a membrane. |
Expression pattern of LotjaGi3g1v0438700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…