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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0440200 |
| Transcript ID | LotjaGi3g1v0440200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Inosine-5'-monophosphate dehydrogenase; TAIR: AT1G16350.1 Aldolase-type TIM barrel family protein; Swiss-Prot: sp|Q84XA3|IMDH_VIGUN Inosine-5'-monophosphate dehydrogenase; TrEMBL-Plants: tr|G7KZG9|G7KZG9_MEDTR Inosine-5'-monophosphate dehydrogenase; Found in the gene: LotjaGi3g1v0440200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:85323909..85328403) extracted from Lotus japonicus Gifu genome v1.2.
AGGTTAAATCACATGATTGTGTTATTTTATTCTGCTAGTGTAACAAACAATAGATAAGAACAAAATATGTCCTATAGTGC CTGCTTATCCTATTCATCAAACAAGCCCTTAATTTTTTTTATTTTATTTTTACAAATATTGGTTGTTCCTTTCCTTGTAA CCTTTGCACGTAAGCATTTACACTTGAACCCCGATCACACCAGATCAACATCCCCATCCACGTGCATCCATGTTTTGCTA GGATAAGGATAGAATAGTCTTTTCAATCACGTAAGCCTTTCCATTCCACTTTTCTGCGCCGAAAAGCTTCTATCGTGCGT CTCCGCAACGGAACACACCATTTTGCAGCACCACCCAAACGTGAACTGAAACTCTTAACAAGCCCAAAACCCTAATCACC ACCACCACCTGAACTCAATGGACTTCACTCCGCCGCCGATCGAAGACGGTTTCACGGCGGAGAAGCTCTTCAACCAGGGC TTCTCTTACACCTACGACGACGTCATCTTCCTCCCTCACTACATCGACTTCCCCGCCGACGCCGTCGACCTCTCCACTCG CCTCTCCCGCAACATCCCCCTCTCCACCCCACTCGTCGCTTCCCCCATGGACACCGTCTCCGAGTCCGCCATGGCCGCCG CCATGGCAGCCCTCGGCGGCATCGCTGTTGTTCATTCCAACACCACGACCTCCTCGCAGGCCGCCTTCGTCCGTGCCGCG AAGTCACGCCGTGTACCAATCCTCTCCGACCCTGTGTTTCTCCCTCCCTCCGCCGCCATTGAGTCTGAAGATGACTTCGG CGGCTCTCCGTTTATCCTCGTCACGGAATCCGGTGGACCTACCGGGAAGTTTCTCGGGTATGTCTCGAAGGCTGATTGGA AGGCGAATCAGAGCGGGAGAGCCCGCGACTACATGCAGCCGTCGCCGGTGACTGTGCCGTGGAGCGCTGACCTTGCGAGG ATTGAGGAGGAGATGGAGAGGAAGAAGGTGGATGTGGTGGGTTTGGTGAATGATGAGGAGGTGGTGGATTTGGTGACGAA GGGGGAGGTGGAGAGGGTGAAGGGGTATCCGAGGTTGGTTGGAGGAGGGTCGGTGGGGGCTGATGGGAAGTGGATGGTGG GGGCCTCAATTGGGACGAGGGAGCAGGATAAGGAGAGGTTGGAGCATTTGGTGAAGGCTGGGGTGAATGCAGTGGTGTTG GATAGCTCTCAGGGGAACTCTGTTTATCAGTTGGAGATGATCAAGTATGTGAAGAAGGTGTATCCTGAGTTGGATGTGAT TGGTGGGAATGTGGTTACTATGTACCAGGCTGAGAATCTCATTCAAGCTGGTGTTGATGGGTTGAGGGTTGGTATGGGCT CTGGCTCTATATGCACCACCCAGGAGGTCTGTGCTGTTGGGCGTGGTCAGGTATAAATTATCGAATCCTTGTTACTACCC TTGATATTATGTTCAAACAGTTTGATTAATCTGGCTTTAAATTGGATTGTGATGTGTTTTGATTTCATAAACCCTTGATT AGCTGTTAGGTAGAGCTCAATGGCATTAAAACAACATGTTTTACATTGCGGTCATGGTCACGGTTACATCGTAGGGGTAG GGGTGGTCGCAATGTGGTTGCTACTGCAATTTAAAATATTAGATTTAGATGTTTGATTCGTGCTTGTGGCCCTTTGTTGG AAGGTCATCTTATAGGTAGTGTGATGGTTTTCTTACTTTTTGGACATGTAAGAATAATATTTTTGAGTAGTTCATTTTAA TATTGCATGTTCTCGCTAACCAATTGCAGCTAGTGCAGAAGACCTCAATTTTTAATGTTGAGTTTTATGTATTTCAGGCA ACCGCTGTTTACAAGGTGTCATCCATTGCTTATAAAAGTGGTGTTCCTGTGATTGCTGATGGTGGCATCTCAAACTCTGG TCATGTTGTAAAGGCTCTATCTTTGGGAGCATCCACTGTTATGATGGGAAGCTTCTTAGCTGGTAGCCTTGAGGCTCCTG GGGCTTATGAATATCAGGTATGGAAGCCTGATGGAATCTTGTAAATTGTAATTGCCTTTTTGTGTGACCTTTCTTTGGGT GGAAGTGTTGTAGAGAAAACCTTTTTAAAATTAGAGAACAGCAGACAAACACTGTAATACCTGCCGTTCAGGGTGTGTTA GCGTGATGAAACTGAAAAGTTTATTGGTTAGAAATGGATGGCCATGGGAAGAGTTTAAAACTTCATAATAAGGTGAAAAA AATGGGTTAGTGTTTAGTGTGGGTACTGATATAGTGTGAGAGTAATTGGTGAACAACTTCACCTTGATTATTAATGGTAC TAACTGACTACTGCATTGTTATTTGGTAGATGTCCTTTGTTGTACAAGAAGTTAAAAGATTGTGTTGTTTATATATTGGA TTTGGCCATTTTAACCAACAGCTGATCATTTGACATGTTAGATGTGTGAAAAATTATACAAAATAAAAGCTTGTAATATT TTGTATGATATTTCTAGGCGCAATATGGAAATAGTTTGTTCCATTTAGGAATATGTGCTTACTCTCCCTCTCCCTCTCCC TCATTCTTGTGGTTTCCTTTTCTTTCCTGTCATTTAGTTTCACTACTCTTTTTATGCCTCTTTCTTTGGCTAGTGACTTT ACATGCTCCAGCAAGATAAAGAAGGCTAATATGCAATAATTACTTTTTCTGCACCAGAATGGTCAACGTGTCAAAAAGTA TAGAGGAATGGGTTCCCTTGAAGCTATGACTCAAGGCAGTGACGCAAGGTACCTTGGTGATACAGCAAAGCTAAAAATTG CTCAGGGGGTTGTTGGAGCCGTTAAAGACAAGGGTTCTGTCTTGAAGTTCATTCCATACACCTTGCAAGCAGTCAAGCAA GGGTTTCAGGATATTGGTGCCTCCTCTCTGCAGTCTGCTCATGACCTTCTAAGGTCCAGGGTGTTAAGGCTAGAGGTATG GTTGACCCGGTCTTTTAGTCATTTTTTTTCTTGCTCTGGTTATTAGCATCACTGTCAATGAAGCTGCTTCATTTGCAATA AAAAATAGGGGTGCTGTTTTGACTGACAGCCCAATCTCCTACTGAACTCATCTATTTAGCTTTGTGCACTAGCTTTTTAT TTTCATGTGTTACTTATGGCAGGATATAATAATAGTTCTCTGAAAAGAAAACCCTTGTACTGATGTGATCAAAAAAATGT CATTCAAGGACCAAATTGATGTCATAATCTTTAAGGAACTAATTATTGTTCCAAATACCTTTCCACGATCAGAATTTGGT GTTAGTTTCGTTTTTCTTAATTTTTTTATCTGCTTTGTCCAGGTCCGGACTGGAGCAGCACAGGTGGAAGGTGGAATCCA TGGGCTGGTTTCTTATGAAAAGAAATACTATTGAAGGATGAAACCATTCAAATTGATAAGCTCTGTAAAAGTTGCAGTTC GCATAAAAGAAGGGCAAAATGTTATTGGGGCAGTTGCAACTTACTGCCACTTAAATTATGGGGATTGGGAAGTTATATGA ATAGAACATCACGGGAAGGAAAGTTTCCCTGAGGTCTTGAAGTAAGATCCCACTATGATTTCGTGGGAATATAATCTGGA GTTTTATTTTAAATTATGTTCACTGGACTTTGTTTCTGTCAATTTTGTCCTAGACATCATGGTTTCCTCCCTTAATGTTA GACAGCTTTTTTTTTTTGGTCAAGTTAGACAGCTTTTATGCGGCTCAAATTTTCAATGAACTGACAACCGTTGTGTTTGG ATAAAAATACGAAACCATCCAAACTCCTAAGTCCGTTTCGTGATCTCTATTCTAATGCAGCAAAAGTAACAGGAAAGAAC TGTTCTGTTGACTTATAAGTCGGGTTTTAACTTCTAACAAAACATGCATGTAATGTGCTAGTGTTACCTGGTATGTATGC GTGTGGAGAGTTAAACTAGTACTTTGTGGACCATTATGTTACCTCAATTTTTCTAATCCAGGTTGCATCTTAGAATTGAT TCTTATACTTAGAGTCAGTACCATTTTAGAATCGATCCTTACATCTTTAGTTTTGCAGGAAATCAACAGTAAGATTTGAT TCTCCACTAAGAGTAGCGATTCCAAGAGTATTGATTCTTCTTTTAGTATTGATTCTCCACCAGTATTGATTCCAACAATA TCGGTATTTACTTCGATTGTATAATCCTAGTTCTCACTCAATGTATGGATGTTCATCTTTTGCTTGCCTGGAGTTGGGAC ATTAGGTTGCGTCATATTCCTTGGGAAGCCAACGGTCTGGATTGCATGACGGGTTTCGGAGCTGCTCAACAGTGTGATTT TACGTGTTTTGATGTTTCACCGAACATAGTTGTTCCACTTCTGTCCCGGGATGTCTTAGCCCTGTGGCCTTTGTTTTGTT TCCCCATTCACCAAAAAAAATGTTAGCCTAATAAATTCTTGAATTTCTTAATTGAAAATTGTTTTTCTTCTTAATGAAAA AATTGATATTGTTAC
CDS sequence (LotjaGi3g1v0440200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGACTTCACTCCGCCGCCGATCGAAGACGGTTTCACGGCGGAGAAGCTCTTCAACCAGGGCTTCTCTTACACCTACGA CGACGTCATCTTCCTCCCTCACTACATCGACTTCCCCGCCGACGCCGTCGACCTCTCCACTCGCCTCTCCCGCAACATCC CCCTCTCCACCCCACTCGTCGCTTCCCCCATGGACACCGTCTCCGAGTCCGCCATGGCCGCCGCCATGGCAGCCCTCGGC GGCATCGCTGTTGTTCATTCCAACACCACGACCTCCTCGCAGGCCGCCTTCGTCCGTGCCGCGAAGTCACGCCGTGTACC AATCCTCTCCGACCCTGTGTTTCTCCCTCCCTCCGCCGCCATTGAGTCTGAAGATGACTTCGGCGGCTCTCCGTTTATCC TCGTCACGGAATCCGGTGGACCTACCGGGAAGTTTCTCGGGTATGTCTCGAAGGCTGATTGGAAGGCGAATCAGAGCGGG AGAGCCCGCGACTACATGCAGCCGTCGCCGGTGACTGTGCCGTGGAGCGCTGACCTTGCGAGGATTGAGGAGGAGATGGA GAGGAAGAAGGTGGATGTGGTGGGTTTGGTGAATGATGAGGAGGTGGTGGATTTGGTGACGAAGGGGGAGGTGGAGAGGG TGAAGGGGTATCCGAGGTTGGTTGGAGGAGGGTCGGTGGGGGCTGATGGGAAGTGGATGGTGGGGGCCTCAATTGGGACG AGGGAGCAGGATAAGGAGAGGTTGGAGCATTTGGTGAAGGCTGGGGTGAATGCAGTGGTGTTGGATAGCTCTCAGGGGAA CTCTGTTTATCAGTTGGAGATGATCAAGTATGTGAAGAAGGTGTATCCTGAGTTGGATGTGATTGGTGGGAATGTGGTTA CTATGTACCAGGCTGAGAATCTCATTCAAGCTGGTGTTGATGGGTTGAGGGTTGGTATGGGCTCTGGCTCTATATGCACC ACCCAGGAGGTCTGTGCTGTTGGGCGTGGTCAGGCAACCGCTGTTTACAAGGTGTCATCCATTGCTTATAAAAGTGGTGT TCCTGTGATTGCTGATGGTGGCATCTCAAACTCTGGTCATGTTGTAAAGGCTCTATCTTTGGGAGCATCCACTGTTATGA TGGGAAGCTTCTTAGCTGGTAGCCTTGAGGCTCCTGGGGCTTATGAATATCAGAATGGTCAACGTGTCAAAAAGTATAGA GGAATGGGTTCCCTTGAAGCTATGACTCAAGGCAGTGACGCAAGGTACCTTGGTGATACAGCAAAGCTAAAAATTGCTCA GGGGGTTGTTGGAGCCGTTAAAGACAAGGGTTCTGTCTTGAAGTTCATTCCATACACCTTGCAAGCAGTCAAGCAAGGGT TTCAGGATATTGGTGCCTCCTCTCTGCAGTCTGCTCATGACCTTCTAAGGTCCAGGGTGTTAAGGCTAGAGGTCCGGACT GGAGCAGCACAGGTGGAAGGTGGAATCCATGGGCTGGTTTCTTATGAAAAGAAATACTATTGA
Protein sequence (LotjaGi3g1v0440200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDFTPPPIEDGFTAEKLFNQGFSYTYDDVIFLPHYIDFPADAVDLSTRLSRNIPLSTPLVASPMDTVSESAMAAAMAALG GIAVVHSNTTTSSQAAFVRAAKSRRVPILSDPVFLPPSAAIESEDDFGGSPFILVTESGGPTGKFLGYVSKADWKANQSG RARDYMQPSPVTVPWSADLARIEEEMERKKVDVVGLVNDEEVVDLVTKGEVERVKGYPRLVGGGSVGADGKWMVGASIGT REQDKERLEHLVKAGVNAVVLDSSQGNSVYQLEMIKYVKKVYPELDVIGGNVVTMYQAENLIQAGVDGLRVGMGSGSICT TQEVCAVGRGQATAVYKVSSIAYKSGVPVIADGGISNSGHVVKALSLGASTVMMGSFLAGSLEAPGAYEYQNGQRVKKYR GMGSLEAMTQGSDARYLGDTAKLKIAQGVVGAVKDKGSVLKFIPYTLQAVKQGFQDIGASSLQSAHDLLRSRVLRLEVRT GAAQVEGGIHGLVSYEKKYY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 7 | 499 | 493 | 1.5E-248 | – | |
| PANTHER | 7 | 499 | 493 | 1.5E-248 | – | |
| PIRSF | 11 | 500 | 490 | 3.5E-160 | ||
| SUPERFAMILY | 13 | 500 | 488 | 1.06E-116 | – | |
| SMART | 22 | 490 | 469 | 7.8E-175 | – | |
| CDD | 23 | 470 | 448 | 9.82481E-141 | ||
| Pfam | 23 | 490 | 468 | 1.3E-118 | ||
| Hamap | 23 | 498 | 476 | 69.51 | ||
| TIGRFAM | 23 | 466 | 444 | 7.3E-167 | ||
| CDD | 110 | 207 | 98 | 8.99542E-12 | – | |
| SUPERFAMILY | 132 | 212 | 81 | 1.7E-7 | – | |
| ProSiteProfiles | 166 | 221 | 56 | 9.0 | ||
| Coils | 179 | 199 | 21 | - | – | |
| ProSitePatterns | 309 | 321 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Molecular function | IMP dehydrogenase activity | Catalysis of the reaction: inosine 5'-phosphate + NAD+ + H2O = xanthosine 5'-phosphate + NADH + H+. | ||
| Biological process | Purine nucleotide biosynthetic process | The chemical reactions and pathways resulting in the formation of a purine nucleotide, a compound consisting of nucleoside (a purine base linked to a deoxyribose or ribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar. | ||
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi3g1v0440200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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