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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0440700 |
| Transcript ID | LotjaGi3g1v0440700.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; TAIR: AT4G03340.1 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; Swiss-Prot: sp|Q9LFQ0|GT14B_ARATH Beta-glucuronosyltransferase GlcAT14B; TrEMBL-Plants: tr|V7AIF6|V7AIF6_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0440700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:85358613..85362837) extracted from Lotus japonicus Gifu genome v1.2.
ATGAGGAAAAATGCTATTTTTCATTCAGGAAGGTTATATAGTGACAGGAAGTGGGTTCTCCCATTTTTTGCTAGCTTGCT GGTATCTGTTAGTCTGGTTTTGACAGCTATATTGGGGAGAGGTAGCTCTTCTGGCGGGTCGGAGCAGTCACCGTTTGACA TCATTGCATTATCAAGATCTGAGGAGGATTCTAGTGAGTATTTTGTGGAATCAGATTTGGAAAGGTCGCTTAATGCTAAT GTGGTTCAGAAGATGGAGGCACCTAGGTTGGCATATCTTATTTCAGGCACTAAGGGTGATAGTCATAGGATGATGAGGAC ATTAGAGGCAGTGTATCACCCAAGAAATCAGTATATCTTGCATTTAGATCTCGAGGCGCCGCCCCGGGAGAGGTTGGAAT TGGCTAATACAGTGAAAGCTGATCCAATATTTCGAGAAATAGAGAATGTGCGTGTTATGTCACAGTCCAATTTGGTGACT TATAAGGGTCCTACGATGATTGCGTCCACACTTCAAGCAATAGCGATATTATTGAAAGAGAGCTCACAGTGGAACTGGTT TATTAATCTCAGTGCCTCAGATTATCCTCTTGTGACTCAGGATGGTTAGTAATTGATCCCTTTCAATGATTTCTTTTTGA TGTTATAGGCTGTTCTTCTAGTAAAAAATGCTTGCAGAAACTATTGGCTATCGCCTTCTTAGTTTTAGATGGATATAGAC ATATAGTTACTAGGAAGCCTTTACTACTTCTGGAAACATAAGTAGCCTATCATTCTGGTATAAACTTATGATGCTGTTTT ACAAGTGATCTTAAAATCTTGGTTGTGTTTTGAAATTTTACTAGTTAGACGAACTTCAGTTGTTCGCCTGTTATTTTCTG ATGCGTTGTTTTCGCTGTGTCCTGCTTCCCTTGTGCACTATTGTTTTAAGAACAGAAAATATTAGTAAAGTTAGCTTTGA AGGACCGAAGATTGTTAAAGTTGATCTGTTCTCTTATTATTGTGGATCTAGCAAGATGGATTCCTATCATCCTATGTAAC ATCATATGATTTTGTTAAAACAATTAATGATCAGGACTAATTGGACTATAGACTGTCAAAATATATTGTACTCACTCTCT CTCTTTTATGGCCTTAAAGGAAACAAGGAGCTTAGCTAGTTTAAGTTGGCTTGAGATAACGATAATTCTTTTGCCATTTA TTTGCAGGTTTTGTTTTGTGTTTCTATGTTAATTCTAATTTGTAGTTGCATTGCTAATTCTGGAAAGTTTTCTTTCTATG CTTCCTTCCAATCTTCCTTTTTTCCATTCTGGTCTAATTTTAGTTTTGATGAGTGGTCCAACGTTGCATCATGCTCCTGA AGCAAGACAAGAATTCGCTAGGCCATGTTGCCTCTAAACAAGAATGTCAATATATGTCATCCTAGTTGGATTCAACTACA ATCTGACTATTCTGATATTCTATACATTGCTACATTTGTTGGAGTTGCATCCTCCCATTAGTATTTCATCCTTGCATATC TGTTGGAAACTTGGAATTCCTCTATGCACGTTTCATCACACTGTGGGTGATTGTCTGGACAACGTCACTTTTGTAGTTTT AATACCTGCTGGATTACATTCATGGTCTGTGACCTGTTGCTCAGATGACTATTGTAAGGGCTTTCAAGATATTTTTAACC TCAGCAGCTATTTATGACCTTTCTTTCGCAAAATATGTCCATTGATTTTTGGGATGTCTGGAACTTCTTTTCCACTAAAC TTCTGTGCGCTATAATCTAAGCAGTTGTTGAATCTTCCCTGATCTCAACTTCAATTTTGAGTATATGTGGCAGCATGGAT TTTTATGATGATTAGGTTTCTTACTTTCATGACACTGATCATTGTTCTAATGGAAATGATGGTAGTGCAGGAGCATATGA TAAAATATGTTCAACATTCTAGATAGTTATCTGAGATGGATGGCTTAAATTATACTATATCTACAAGTCTATACAATTGT TGTTGGATGATTATTGAAGGAAACCCTGAGAAGATATCTAGTACCCGAAAATTGATTTTTTGGGGCATCTTGTAACCTTA TGAATCTTTGGCCATCATCATGTCATGTGCTCCAACTATTCTTGGTATATTTTGTATGGTTATTTATAAAGATTCGGATA GCTTATCATATGGTGTTTGGAAAACCTAGTTTAGTTTAATTCCATCTTCAATATATCAAGTCAAACATGTATGGAATTTA CTTAAATGAAGCTTCATCAATCTCTCTTTCAACTTATGTTCAACTCAATCTTCTCCATTATTGATTGTTATACTTGAAGC TGCTTAATTTCTTCGGTCAAAATCAATTTACTCTGATTTACGTTTCCACTTTGAGTTAGTCTAACATTGTGTCTGATGTG GTAATTCACTTTGTCTACACTCTCTCTGCTTTCTCACTCCACAGTCTACACTCATGGGATTGGTTTAGTTCCTTATTAAC CATTTATTATTACTTTTTAATACATTGAATAAAAGTGTGCTTCTCTATCCTACATGATATTCTTCTGCATCTCACTAGAG ATACATTATCGATTCATCATTCCAAAGAAGACACGCAACACCATCTCTATTATCATTTTAACTCTTAATTGTGGCTGATC AGTAAATGTCATCTCATTTGTGTATGCTTAGGCTCATATATTCACAATTAATGTAATTCCCTCTAGGTTGCTACCATTCA GTTGTTCTGTTGTTGCCATGTTGACATATTAGGTATGTAGAATCTCTGTCTCACAAAATACTTGCCTGTTTCATGACTAC ATCTGAAGTCTGATCCAAATGTAAATATTTCCTTTTATTTACGGAGTTTAATATCATGGTCATGGGTATCTATAGATAGT GTGACCTAAGTACTAATATCTGCATTTAGTCACGGTTGTCTGAGCTATATCATTTGTTTATAACCCTTCTTGAATCTTCT TATGAAGTCATGTGTTTGTTTCTTGTTTTTTCAGATTTGCTTCATATTTTCTCTAATCTGTCAAGAGACCTCAATTTCAT TGAACATACACGAATTGCTGGTTGGAAACTGTAAGCTAATTATTATAAAATTAAAATTACTGTAATATACACCCCTCCTG GTTACTGATTGTGATTACTCTGTCTCGCTGTTTATGTGCTCAGGAGCCATCGAGCGAGGCCGATTGTTGTTGATCCTGGC CTTTACTTGTCCAAAAAATCTGATATTGCATGGACTACTCAACGAAGGACACTTCCTACATCTTTTAAGTTGTTTACTGG TAAGCATATATTGCTTCATTTCTACTTTAAACATTGTACTAAGTAACACTAAAGAGTGGTAAGTTTATTATTATCTAGTT AGCTAGTTAGCTTAAATTAACATTACTTCACTATTAGATTAGTTGATTCTTCCTTGAAACAGGTTCAGCTTGGGTTGTGC TGACCAGGTCCTATTTGGAGTACTGTATATGGGGATGGAATAACCTTCCACGGACTATCCTCATGTACTATACAAATTTT ATCTCCTCCGCAGAGGGTTATTTTCACACTGTCATCTGTAACACCGAGGAGTTTCGCCGCACTGCAGTAAGCCATGATCT TCACTACATTGCTTGGGACACTCCCCCAAAACAGCATCCCATCTCATTGACTATGAAGGACTTTGACAAAATGGTTAAAA GCAAGGCTCCCTTTGCCCGGAAGTTTGCGAAGGATGATCTTGTCCTCGACAAGATTGACAAAGAACTCCTGGGCCGCACA CATAGATTTTCACCTGGGGCATGGTGCATTGGCTCCTCAGATGGTGGGGCAGACCCGTGTTCATTGCGTGGCAACGATAC AGTGTTTAGGCCAGGCCCTGGTGCTGAGAGGCTGAGTGAACTGCTTCAGACACTGTTGTCTAAAGATTTTCAAAGCAAGC AATGTTTGTGATGAAGGTGTAAGTGTAACCCTCAAACCATGATAAGGTTAAGTGTACATAACTCATAAGCGTGCCTTATA TAGTCATGTATTCAAGATGCAAAAGGTCAGAATTTTGTTTTGTTTTCTATAAGTTGATACTCTAGGTTCAAAGTTAGAAG CCACAGGCTTCAGTTTTCAAGCTAACTATTGAGGTAATCACAGCTTTCTTATTTACTGAATGGCAAAGCCAATGAAAATC TCAGAGTTTGGTAATTTTATTGTGTATCCACAAGTCTAAAGTTAAAATCATGGTCTCTTAACAGA
CDS sequence (LotjaGi3g1v0440700.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGGAAAAATGCTATTTTTCATTCAGGAAGGTTATATAGTGACAGGAAGTGGGTTCTCCCATTTTTTGCTAGCTTGCT GGTATCTGTTAGTCTGGTTTTGACAGCTATATTGGGGAGAGGTAGCTCTTCTGGCGGGTCGGAGCAGTCACCGTTTGACA TCATTGCATTATCAAGATCTGAGGAGGATTCTAGTGAGTATTTTGTGGAATCAGATTTGGAAAGGTCGCTTAATGCTAAT GTGGTTCAGAAGATGGAGGCACCTAGGTTGGCATATCTTATTTCAGGCACTAAGGGTGATAGTCATAGGATGATGAGGAC ATTAGAGGCAGTGTATCACCCAAGAAATCAGTATATCTTGCATTTAGATCTCGAGGCGCCGCCCCGGGAGAGGTTGGAAT TGGCTAATACAGTGAAAGCTGATCCAATATTTCGAGAAATAGAGAATGTGCGTGTTATGTCACAGTCCAATTTGGTGACT TATAAGGGTCCTACGATGATTGCGTCCACACTTCAAGCAATAGCGATATTATTGAAAGAGAGCTCACAGTGGAACTGGTT TATTAATCTCAGTGCCTCAGATTATCCTCTTGTGACTCAGGATGATTTGCTTCATATTTTCTCTAATCTGTCAAGAGACC TCAATTTCATTGAACATACACGAATTGCTGGTTGGAAACTGAGCCATCGAGCGAGGCCGATTGTTGTTGATCCTGGCCTT TACTTGTCCAAAAAATCTGATATTGCATGGACTACTCAACGAAGGACACTTCCTACATCTTTTAAGTTGTCCTATTTGGA GTACTGTATATGGGGATGGAATAACCTTCCACGGACTATCCTCATGTACTATACAAATTTTATCTCCTCCGCAGAGGGTT ATTTTCACACTGTCATCTGTAACACCGAGGAGTTTCGCCGCACTGCAGTAAGCCATGATCTTCACTACATTGCTTGGGAC ACTCCCCCAAAACAGCATCCCATCTCATTGACTATGAAGGACTTTGACAAAATGGTTAAAAGCAAGGCTCCCTTTGCCCG GAAGTTTGCGAAGGATGATCTTGTCCTCGACAAGATTGACAAAGAACTCCTGGGCCGCACACATAGATTTTCACCTGGGG CATGGTGCATTGGCTCCTCAGATGGTGGGGCAGACCCGTGTTCATTGCGTGGCAACGATACAGTGTTTAGGCCAGGCCCT GGTGCTGAGAGGCTGAGTGAACTGCTTCAGACACTGTTGTCTAAAGATTTTCAAAGCAAGCAATGTTTGTGA
Protein sequence (LotjaGi3g1v0440700.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MRKNAIFHSGRLYSDRKWVLPFFASLLVSVSLVLTAILGRGSSSGGSEQSPFDIIALSRSEEDSSEYFVESDLERSLNAN VVQKMEAPRLAYLISGTKGDSHRMMRTLEAVYHPRNQYILHLDLEAPPRERLELANTVKADPIFREIENVRVMSQSNLVT YKGPTMIASTLQAIAILLKESSQWNWFINLSASDYPLVTQDDLLHIFSNLSRDLNFIEHTRIAGWKLSHRARPIVVDPGL YLSKKSDIAWTTQRRTLPTSFKLSYLEYCIWGWNNLPRTILMYYTNFISSAEGYFHTVICNTEEFRRTAVSHDLHYIAWD TPPKQHPISLTMKDFDKMVKSKAPFARKFAKDDLVLDKIDKELLGRTHRFSPGAWCIGSSDGGADPCSLRGNDTVFRPGP GAERLSELLQTLLSKDFQSKQCL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 35 | 35 | - | – | |
| Phobius | 1 | 18 | 18 | - | – | |
| PANTHER | 2 | 422 | 421 | 7.4E-233 | – | |
| PANTHER | 2 | 422 | 421 | 7.4E-233 | – | |
| Phobius | 19 | 30 | 12 | - | – | |
| TMHMM | 20 | 39 | 20 | - | – | |
| Phobius | 31 | 35 | 5 | - | – | |
| Phobius | 36 | 423 | 388 | - | – | |
| Pfam | 90 | 338 | 249 | 1.7E-61 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
Expression pattern of LotjaGi3g1v0440700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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