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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0442000 |
| Transcript ID | LotjaGi3g1v0442000.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Indole-3-acetic acid-amido synthetase GH3.3; TAIR: AT4G03400.1 Auxin-responsive GH3 family protein; Swiss-Prot: sp|Q6I581|GH35_ORYSJ Jasmonic acid-amido synthetase JAR1; TrEMBL-Plants: tr|A0A0B2P4Z8|A0A0B2P4Z8_GLYSO Putative indole-3-acetic acid-amido synthetase GH3.5; Found in the gene: LotjaGi3g1v0442000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:85466926..85471254) extracted from Lotus japonicus Gifu genome v1.2.
ATGGTTGGGGAACTACAATATCTCAGAGATGGATGCAAGTGCATTGGAATCCCTTTTCACTAGTGTGGTTCCCCTTGCCT CACTTGTGGATTTTGAGCCATATATCCAAAAAATTGCAGATGGAGAAACAGGTCCTATACTCACTCAACAACCCATGACC ACTCTTTCCTTAAGGTACTATACTTTACCTTATTTCATGATTTTATTACTTTTAGTTCTTCCTTCCTCCTCTTTTGTGCA TAAAAGGCATTCCTTGCAGCTTCAATTTTTCTTTCATTTTATGGCTATGTTCCCATTGATATTAATCAGGAATCAGGATA TAGAATATTATATTGAGTCCATATATAGCTTTCTCCTTTTTATTCCGATAGAAAAAATGTGTGGTGATGATGGTTGTGTG CAGTTCTGGAACCACAGAGGGAAGGCAAAAGTTTGTGCCCTTTACAAGCCATAGTGCACAAACTACCCTTCAAACTTTCA CTTTAGCAGCAGCCTATAGATCAAGGTGTGCCTCTCAACTCTCATTCTATTATTGGTACTCCTTAATTTCTGTGATGAAT CTTAATGATAACTTAGCTTTTGGATATACATCATTTCTACCACAAAACACATAGATCAACTAACATGATGTTGTTCTAGT TTAAGCAGATGTTTTGGTTTCGAGTTCCTATGAATACAACTGAGTTAAATACACGATATTGTTCTATAGCTTAGGCATAT GTCTTGGGTATGAGTTCATGTGAATGCAGCTAGTTAAATATTTGATTTCTTTTTTGAAGTTGTTTCATTCTTCTTCTCAC TGTTTAACTTACAGGGTTTATCCCACAAGGGAAGGAGGTAGGATTCTTGAATTCATATACAGCAGCAACCAGTTCAAAAC AAAAGGAGGCTTATCAGTAGGAACAGCCACAACACACTACTATGCAAGTCAAGAATTCAAAATCAAACAAGAAAAAACAA AGTCATTCACTTGCAGTCCTTATGAGATCATTTCAGCAGGGGACTATAAACAATCCACATACTGCCACCTCCTTCTTGGC CTCTTCTTCTCTGATCAAGTGGAGTTTATTTCTTCAGCTTTCGTCTACGGCATTGTGCAAGCCTTTCGCAGTTTCGAAGA GCATTGGAGGGAATTGTGCAGTGACATTAGACATGGTACTCTAAGTCCACGAATCAAACTACCACAAATGAGAGATTCTG TTTTGGGAATCATCACTTTATCAAATCCCTCATTGGCTTCAAAACTAGAAGCCTCTTGCCAGGAGCTAGAACTGGTAAAT TGGTTTGGTTTGGTTCCGAAGCTTTGGCCAAATGCTAAGTACATATATTCCATAATGACAGGTTCTATGCAACCATACTT GAAGAAGCTTAGGCATTATGCAAATGGGTTGCCATTAGTAAGTGCTGATTATGGCTCAACTGAGAGCTGGATAGGAGTTA ATGTGGATCCTGGTTTGGCTCCAGAGAGTGTTACATTTGCTGTTGTGCCCACTTTCTCTTACTTTGAGTTCATACCACTT TACAGACAGAAACAAGATCATTCAAGTGCTTCAGTTGGGGATGATTTCATGGAAGACAGACCAATCCCACTATCCAAGGT TAAGGTTGGACAAGAGTATGAAATAGTGCTCACAACTTTCACTGGTAAACACTCATTCTTCTTCTCTTCAATAGATGCTC ATTTACATCTAACACTTATTTCTCCTGTACTATGATTTTCGCTAATGTTTCATGATTTGCGAGGAAACCTCACACCTACA GTTTATGACATTTTTTACTCTAATAAACTCTACAATTTTTTGCGGTAAAAAACGACACAAACTATTGGTTTTTTTTTATA GGTAAATGTTAGTTGTTACAAATGTTAGTAAATTAGTCCCTCCTCCGGATTCAAATCCGGGACTCTTCACCCTCACCCCA CCCAACCCTTATAACACAAACTATTGGTGTTAATGCCGTACACGACTCACCTCTCTATAATTTTTATTTAGACACTTCTC ACATTCAAATTCAACTTTAATACATTCGCATTCAATTTTTCTTCAATCCCAATTTCACCTCATTTGTTCGCAATTCGCAT AGATGTCGTTTTCCCTTTTTAAAATTAGCATTCTTTGTTTTATTAAAATTAATTTTTTTTTGTTGAGGTGTTTTTGTTCT TATTAGAAGCACGAAGAAAGAATTAACAAGGTAATATAATATAATTTGAATCCTCTTTAATTATACATGGTAGCACATCA CAGAGACAGTTGGTTTTATACTATACTGAGACATTAGATGCATGAATGAAATACATTCTGCCAATGGGGGGGCCTTTATT TTCTTCGGATATTCTTATCAGTGTTGGCCACAATTTGGCATTGTGTGACCATAACCCACGGGTTGGTTCATACACATGTC GTATTGTAGCTGTCCTTTGTTATTTCAGAACTAATGTTATGTACATTTCATGACAAGGATTCACCATGACTTTTGATAGT GTGGTCATTTTCAAAATTCCATTTTCCAAAATGTAATTCTTTGGGTTATATAGTGCATTTGTTAGATTATACATACTAAT GTTTTCCATAACCACATTGATTTAAATCGGTTGAGGGCATCAGTTCAAAATTTAATAGTCGGATTGTAGGTAAACCAATA GTAGTTAAATAATATTTTTTAAATATACATATGAAATTATATATAATAAAATATTACACACAATATATAGTTTTTTAACT TTCAATTGAGATGAAAATTAGAATTTTAACCTTCAATATATAGATTTATATAACATTCAATTTAAGGAATATGGTGCATC ATGGATTCATGGTAAAATGATCATTCATGCATGAAATTATACATAGTCCAAAAAAAAGTGTAAAATGGCCACAACTGATT CAGACTAATTTTTTAATGGTTTTAATTTTTGACTGGTTTACCGGCTTCAGCAAGATCAGTTTTCGTGTGCTGGTTGAACA TATAAAACACTTCATCTTTCATCTTCTTAATTTGTTATTGTTAATATGTATATGAAAAATGATTTATAAACATTTGCAAT TTGCATAATAAAAATCTAATAGGCACCCCATAGTGAGAAAGAAACAAAAAGAAATTGATATGATATATAATAATGAAAAG AAATAGAGTAAAAAGATAGATGTTTGTTGCATGTAAACTCTATCTGTATGTCTAAATATATATAAAGTTGTGCTGGTTGA AAATACAAAGTCGCAATATCTGAGATGGCACACATGGCAGTTTTATTTTATCAGAACTTGTGAAAAAGAGTAAAACATAA TTGTGGCAGTTCTTTCGAACACACAAGTTGTGCCGGTTAAAAACTGCTCCATGACCTCTATGTCCCCCCGGATGTCATTG TTCTCACAGAGAGTCAGAGAATCATTTTTCTAATACTCTATCCATTCATTTTTAACAGTACATTTTGAAGAAATTTTTTT TTCTATTTAACTGTCCACTTAGCATTTTAAGAGAACATTAAATGATGTTTTTATCACAAATGTCATTGTCAGTACAATAA ATGAGAAAAGATAACACATACTTTAAAAGGTAAAATAGAAAAATAATCCTCACTTTTTCTAAAAATCAACAAAATTAATC ACATCCTTAATATGTGTGCCTCCACTCAAAGTGGACAGTTAAATAGGAACGAAGAAAGTATATACAAAGTATCTAATAAA AATTTGTTTACTTTCAGGACTATACAGGTGCAGATTAGGAGATGTGGTGGAAGTGGCTGGTTTCCACAACGGTACACCAA AATTGAACTTCATATGCAGAAGAAAACTGATTCTAACAATAAACATAGACAAGAACACAGAGAAGGACCTTCAGATGGTG GTGGAGAAAGGGTCACATGTGCTGAACCAGGAATCCCAAGCAGAGGTAGTTGATTTCACAAGCTATGCCGACGTGTCGAA CCCGCCGGGTTGCTATGTTATTTTCTGGGAGATGAAAGGAGAAACAGAGGAGAAGGTGCTTGAAGCGTGTTGCAGGGAAA TGGATGCAGCTTTTGTTGACCATGGCTATGTTGTGTCGAGAAAAACATGTTCAATAGGGCCATTGGAGCTTCGCATTGTT GAGAGTGGAACTTTCAAGAAGATATTGGATTGTTATGTGGCGAGTGGTGCAGGGTTGGGACAGTTCAAGACACCTAGGTG CACCAACAACCCTGTCCTCCTCAACATTCTTAATGCATGCACCATTAAAACATTCCGGAGTACAGCTTATGGTTCAAACC GACCATGATATAATGCATCATTGCTTTTGTTCCCTTTTTTCTTCCAAATGTATCATGAGGACAGGTTTTGTTCTTGTGAA CAAGAGTGA
CDS sequence (LotjaGi3g1v0442000.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGAGATTCTGTTTTGGGAATCATCACTTTATCAAATCCCTCATTGGCTTCAAAACTAGAAGCCTCTTGCCAGGAGCT AGAACTGGTAAATTGGTTTGGTTTGGTTCCGAAGCTTTGGCCAAATGCTAAGTACATATATTCCATAATGACAGGTTCTA TGCAACCATACTTGAAGAAGCTTAGGCATTATGCAAATGGGTTGCCATTAGTAAGTGCTGATTATGGCTCAACTGAGAGC TGGATAGGAGTTAATGTGGATCCTGGTTTGGCTCCAGAGAGTGTTACATTTGCTGTTGTGCCCACTTTCTCTTACTTTGA GTTCATACCACTTTACAGACAGAAACAAGATCATTCAAGTGCTTCAGTTGGGGATGATTTCATGGAAGACAGACCAATCC CACTATCCAAGGTTAAGGTTGGACAAGAGTATGAAATAGTGCTCACAACTTTCACTGGACTATACAGGTGCAGATTAGGA GATGTGGTGGAAGTGGCTGGTTTCCACAACGGTACACCAAAATTGAACTTCATATGCAGAAGAAAACTGATTCTAACAAT AAACATAGACAAGAACACAGAGAAGGACCTTCAGATGGTGGTGGAGAAAGGGTCACATGTGCTGAACCAGGAATCCCAAG CAGAGGTAGTTGATTTCACAAGCTATGCCGACGTGTCGAACCCGCCGGGTTGCTATGTTATTTTCTGGGAGATGAAAGGA GAAACAGAGGAGAAGGTGCTTGAAGCGTGTTGCAGGGAAATGGATGCAGCTTTTGTTGACCATGGCTATGTTGTGTCGAG AAAAACATGTTCAATAGGGCCATTGGAGCTTCGCATTGTTGAGAGTGGAACTTTCAAGAAGATATTGGATTGTTATGTGG CGAGTGGTGCAGGGTTGGGACAGTTCAAGACACCTAGGTGCACCAACAACCCTGTCCTCCTCAACATTCTTAATGCATGC ACCATTAAAACATTCCGGAGTACAGCTTATGAGTGA
Protein sequence (LotjaGi3g1v0442000.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MRDSVLGIITLSNPSLASKLEASCQELELVNWFGLVPKLWPNAKYIYSIMTGSMQPYLKKLRHYANGLPLVSADYGSTES WIGVNVDPGLAPESVTFAVVPTFSYFEFIPLYRQKQDHSSASVGDDFMEDRPIPLSKVKVGQEYEIVLTTFTGLYRCRLG DVVEVAGFHNGTPKLNFICRRKLILTINIDKNTEKDLQMVVEKGSHVLNQESQAEVVDFTSYADVSNPPGCYVIFWEMKG ETEEKVLEACCREMDAAFVDHGYVVSRKTCSIGPLELRIVESGTFKKILDCYVASGAGLGQFKTPRCTNNPVLLNILNAC TIKTFRSTAYE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 17 | 17 | - | – | |
| PANTHER | 1 | 331 | 331 | 3.9E-187 | – | |
| Phobius | 1 | 3 | 3 | - | – | |
| PANTHER | 1 | 331 | 331 | 3.9E-187 | ||
| Pfam | 2 | 310 | 309 | 9.0E-105 | ||
| Phobius | 4 | 12 | 9 | - | – | |
| Phobius | 13 | 17 | 5 | - | – | |
| Phobius | 18 | 331 | 314 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0442000.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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