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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0444900 |
| Transcript ID | LotjaGi3g1v0444900.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Mannan endo-1,4-beta-mannosidase-like protein; TAIR: AT2G20680.1 Glycosyl hydrolase superfamily protein; Swiss-Prot: sp|Q7Y223|MAN2_ARATH Mannan endo-1,4-beta-mannosidase 2; TrEMBL-Plants: tr|A0A151SEW7|A0A151SEW7_CAJCA Mannan endo-1,4-beta-mannosidase 2; Found in the gene: LotjaGi3g1v0444900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:85792012..85796964) extracted from Lotus japonicus Gifu genome v1.2.
AACACAACAGACCAACGAGAAAAGTGAGATTTTCTCCTTAGTCTAATCAGCAACAGTTAATATTCACAGAAACGATTCAG TAAAACACGGCATTGTTGTTTGTCCCTCTTAAATGCTGTGAGACTGAGACAGTGGAGCTGAATCCCCACCCAGCATTGCT TCCTTCTCCTTCACAAACATTGATTTCACCGCACATTCATCATTCATGCATTCAACTCTTCATCATTCATTCAATCTTCT CTGCAACTTGGACTAGTTTCAAGATAAACATGATATGAGTCATTTTCTGTCTTCTTTGGGGTTGAACTGCAAAAGCAAAA ACACCACAACAACCATTCCCATTTTCATGCAGAGTCATTATTCCCAACTCACCCTATAAATCCCTTTAATTACAAACCCT AATTATACCAATTTACTCCAAACCACAACTAAATTTTCCCCATGCATTCATTCTTTTTGAGACCCTGATTTTCTTTTTCC TTTTTTCTTCTTGGTGAATTAGTAAAGTTAACACCTTTGAACCCCATTCATACTCTTCTCATTACAAAAAGAGAGATCTT AGCATTTTAATCAATTGGGGTTTCATTGTTTCAAGAACAATCAAAATCAATTCTGGGTCTAAAGGTAGTGGCTTTTGAGC AAAAGGCCAAAAGGGTACCTGGGAACCACCCCAATTTGTTGAATTTCGCTCTCAAACAATGGGGGTAAGAAATGGGATGT TGTATCATATTCTGGGGTTGTTATCGGTTTTGGCTTTCGTTTACATGTCATTTGGAGGGTTGAGGTTCAGGTTTGAGGAA GGGTCAGAAGTGGCTTTTGTGCAGAGAAACGGGACGCAGTTTGTGGTGGATGGGAAGGCTTTCTACGTAAACGGGTGGAA TTCTTATTGGTTGATGTTCCAGTCGGTGGATGTTGATTCCAGACACAGGGTTCGTGAAATGCTGAAAACTGGTGCTAAGA TGGGTCTCACTGTTTGTCGAACTTGGGGGTTCAATGATGGTGGTTATCATGCCCTTCAAACTTCCCCTGGTCGCTTTGAT GAACAAGCTTTCAAGGTACTGTGTGTTGTTCCTAGAATTTGTACTGTTGTGTTCTTTTTCTTGTGTCTTTTCCTAATGCC GACAGAAATTTGTGTTTGTATGCGTGTATGACAGTGTTCTGGTTATTGTTTTTGTTTATTGGGGTTTTCTTTTTATTTGA TTTTTGTCGTTGCCTTCTCAGGTTTTGTCTCTTTTCCTGAAATTGTGTTTGACTGTGTGATTGTAAACCTTGGCTGATTG TTGTAAACTTGTAACATATGACATGAATGGCGATATACTTGTCGCTTTAGAGCTGAATATTATAATGAAGTAAATTGAGA TAACATTGTTCTTGGGAAGTGATAGAATTCAGAGAAGAAGTGTCAGGCAGTCTCTCTTTGGGGTCAGTGGCTCAGTATCT AAGTGGAATCAATTTGAATGTGGTCCTTTTGTTATGATCCTATTTGTTCATTAGCTAGATGATTCAACAAGAAAAACGTC GGTCTTGTGTTATTCCTACTTCACCGTCCTTAATATATATGAGTTTTACAGTTGCCCTATAAATGGCGTCATGTTTCTGA CTTCTCACGAAAATCAGTTTTATAGTGACTTGTTAAAATGGTTTCTACTAGAAGCAATGAGTGGTTTATTTTTGAAAATT CTCATGCTACACTTTTCAATAGTCTTTTAAAAATTTATTCCGGTTGTCTTGTGGACTTATGTCTTGATGAATCTGTCTTT CCATTATGTCTGGATTGAATGAAAAATGCTTTTTGTTGCATTATTGATACTTCTTTTGCTCATGAAATGAGTAAGTTGTG TACTGCTCAGCACTATTTTTTGATGTATGGAAAGCATGCTGAGATTTGTTGGTGACTGGTAGCAGGCCTTGGATTATGTC ATAGCAGAAGCAGGGCAACAAGGAATTAGGCTACTCCTTAGCTTAGTAAATAACTTGGAAGGATTAGGTGGGAAGCCTCA GTATGTCAAATGGGCATGGCAAGATGGGGTAGGGTTAAGCTCGTCTGATGATTCTTTCTTCTTTGATCCATCAATCCGTA GTTATTTCAAGAATTACATCAAGGTATGACATGTCTATCTTTCTTTCTTTCCCCTCTTTCTATTTGCCCTATACCCTGCC ATCTATGGTCGCAGAAGCATTGTCTTGTGCTATTCAACATTGTTTTCATTTTACACACACATGGATAAACATACATACCA CACAACTTTCTAGGAAATATGAATTCGACAGATCTATTCATTGAATTAAAACTTCTTATTAAGTGGATCAAATGTGCAAA ATTGTAAAAAAAATTAAAATCAGTTCATACTTTATTAGACAACTCTATTTTAATATATAATATACTTCTTAAAATATGAG CAAATGTTGACTATAAGATTCCATACCTTTGAATTATTGATTTATTTGAAATTTTGAGCAAATGATTACCATATTAATAT CATATGAATTAATAGTTGGATTTGTTAAATTTATATTTGATAGAAAGTTATTAAGGGCAAGAGTTGGTAAGTAGGCCATA TTCTTTCCATTGACATCTTTTAGCACAAGCAAATACCTTAAATTGCCACCTAGCAAGTTTAGTGATGATACTTTTGGACT GCTATGTTCCTTACGATTCCTAAACTTTGTAGGCCTAACTTTTCTATTTTTTTTATTAGCGCCTAACTTTTCTATGATTT ATCTTACGAATGGTATACAGCATGACAAGTAGTTTGCATATTTGTTTCTGCTGGCCAGACCATTTTATTTGAAATTTGAG ATGCATTTTAATCACTTTATTCCACCACCCCCACCCCCTCGCCCCCGGAAAATTAAATCATGTTGACAAGCATTTGGAAC TTGAGGCTGGCGATGGCATCTTACTGACAAAATGTTCCACCATTTAGTACTTAACCATCTAGTTTTCCCACCCTATGAAG GAGTAAATTTGGGACTGAATCATCACTGCAGCAGTACAACCTTTGTGGGAAGCAAATACTGATATGACTAATGCAGAACT TTCTTTCCTTTTTCCTGCCTTGTATCCTTTTTATTTTTTGGTCTCACTGCTTTCTGCTCGCCTATGATTCGTGACTTAAT ATGTGGGTCAAAATTACATCTTCATTTACATGCTAAGTTGTATGTCTAACGCATATCTGTACTGTCCATTCAATTTTAGC TAAAATGTTTGCAAACCAAGATGTTCTTAGATAAATTAACAGTTTACCTAAATTTTTGTGCAGACTATCTTGACAAGGAA AAATACTATCACTGGAATTGAATATAGAAACGACCCCACCGTTTTTGGTTGGGAATTGATTAATGAACCTCGGTGCATGT CTGATCCTTCTGGTGACACTCTACAAGTAACTCCTTTGCCTGCTTTAACTTGACTACTTCAAATGTTCATGAAAAAATAT GTTAGCAATATCAATAGCTATTTCAAAAATTAGATTAATCACTTGCTGCTTCCTTTTTGGCTACGGGTTATAGAAATTAG CATTCATGAGGAGATTGAAAAGTTCAAATTTCTTTGTCTTGGAAGTCATGATCTCAAACGAATTTGTTCTGTCTATTTGC TCTAAACCACAGAATGCTGCACATTTTTCACTAGTGTGTAGCTGGTTTTGATTTGAAGGATTCAATATCTAATTTTAGCA ATTGTTTCTGACAATAATTTTTGACTCCATGTTGAAAAATATATAGATAAAAATAAGGACAATGTTGAAACCTTTCAACT CAATTAAAATTGCTTTTGTTTTTAATGTAAATTCATAGGAAAGATAGGGGGAAATAAGAGCAGTTATTGTTCACATTTTA TTTAGATATCTGAGTATACACTTTACTCAATTGCCATAGAATTGCAGGAGTGGATAGAAGAAATGTCAGCTTTTGTCAAA TTGATTGACAAGAACCATCTGGTGACTGTTGGGCTTGAAGGTTTCTATGGTCCTCATGACCCGAAAAGTTCGACTGTCAA CCCTGGATATTGGGCATCCCAAGTTGGGTCTGATTTTATTCGGAATTCCAAAATCTCAAATATTGATTTCACCTCTGTTC ATATCTATGGTGACCAATGGTAAGCATTGCATGAATACTTTATCTGTTTTAGATTTGCTCATAATCATAAGAAACAAGAA CTAAATTTGAGAAGTGCCACAGAACACAATCTGCAGAAGGAAGTTCCATAGTTTTCTTCTGATGAGTTTTTTATGTTGTC TTCACTGATCAACTAGTGCAGCAAGAAATCTTGAGATTTATATTATATTTCCATTTTACATGTCTTATGATCTGCATTTG GAAGCACACATCCAAAATTTTCTGATGATTATTATTTGAATAGGTCTTACAAGCAAGAATTTGAAGATCAACTGAAATTT GTCTCCAAGTGGATGCTTTCCCACATTGAAGATGGTGATGAAGTATTGCATAAACCTGTCTTGTTCTCTGAATATGGATT GTCACAAAGAATCCAGAACTTTTCCGCGTCTGACCGAGAGAAGATACACAAAACTATTCTAGACATAATTTACAAATCTG CCAAAAGAAACAAATCTGGAGCAGGTACTCTGATTTGGCAATTCTTGGTTGATGGAATCAATGAGTTTTCTGATGAATAT GGGATTGTGCCAGGGGGAAATTCATCAACTTATTCACTGTTAGTTGAACAGTCATGCAGATTGGCCAAAGTTAAGGGATG GCCACAACAGGATGTAAAATTCAAACAAGTTTGTTAACAAGGCAATAGAAAACAAATATTATAATATAATAGAAATTTAG ATAAAAGATGATTCCTTGGTTTATGGAGTTACACCATGGGTTTTTGTACAATGTTGCAGTGAAATAATTACTTTAAAGTT GAGTACATACTAATACACTAGTGTGGTAACCATGTACAAGAGATTTCTTATAAATAAAGTATTATTTAAACTA
CDS sequence (LotjaGi3g1v0444900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGGGTAAGAAATGGGATGTTGTATCATATTCTGGGGTTGTTATCGGTTTTGGCTTTCGTTTACATGTCATTTGGAGG GTTGAGGTTCAGGTTTGAGGAAGGGTCAGAAGTGGCTTTTGTGCAGAGAAACGGGACGCAGTTTGTGGTGGATGGGAAGG CTTTCTACGTAAACGGGTGGAATTCTTATTGGTTGATGTTCCAGTCGGTGGATGTTGATTCCAGACACAGGGTTCGTGAA ATGCTGAAAACTGGTGCTAAGATGGGTCTCACTGTTTGTCGAACTTGGGGGTTCAATGATGGTGGTTATCATGCCCTTCA AACTTCCCCTGGTCGCTTTGATGAACAAGCTTTCAAGGCCTTGGATTATGTCATAGCAGAAGCAGGGCAACAAGGAATTA GGCTACTCCTTAGCTTAGTAAATAACTTGGAAGGATTAGGTGGGAAGCCTCAGTATGTCAAATGGGCATGGCAAGATGGG GTAGGGTTAAGCTCGTCTGATGATTCTTTCTTCTTTGATCCATCAATCCGTAGTTATTTCAAGAATTACATCAAGACTAT CTTGACAAGGAAAAATACTATCACTGGAATTGAATATAGAAACGACCCCACCGTTTTTGGTTGGGAATTGATTAATGAAC CTCGGTGCATGTCTGATCCTTCTGGTGACACTCTACAAGAGTGGATAGAAGAAATGTCAGCTTTTGTCAAATTGATTGAC AAGAACCATCTGGTGACTGTTGGGCTTGAAGGTTTCTATGGTCCTCATGACCCGAAAAGTTCGACTGTCAACCCTGGATA TTGGGCATCCCAAGTTGGGTCTGATTTTATTCGGAATTCCAAAATCTCAAATATTGATTTCACCTCTGTTCATATCTATG GTGACCAATGGTCTTACAAGCAAGAATTTGAAGATCAACTGAAATTTGTCTCCAAGTGGATGCTTTCCCACATTGAAGAT GGTGATGAAGTATTGCATAAACCTGTCTTGTTCTCTGAATATGGATTGTCACAAAGAATCCAGAACTTTTCCGCGTCTGA CCGAGAGAAGATACACAAAACTATTCTAGACATAATTTACAAATCTGCCAAAAGAAACAAATCTGGAGCAGGTACTCTGA TTTGGCAATTCTTGGTTGATGGAATCAATGAGTTTTCTGATGAATATGGGATTGTGCCAGGGGGAAATTCATCAACTTAT TCACTGTTAGTTGAACAGTCATGCAGATTGGCCAAAGTTAAGGGATGGCCACAACAGGATGTAAAATTCAAACAAGTTTG TTAA
Protein sequence (LotjaGi3g1v0444900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGVRNGMLYHILGLLSVLAFVYMSFGGLRFRFEEGSEVAFVQRNGTQFVVDGKAFYVNGWNSYWLMFQSVDVDSRHRVRE MLKTGAKMGLTVCRTWGFNDGGYHALQTSPGRFDEQAFKALDYVIAEAGQQGIRLLLSLVNNLEGLGGKPQYVKWAWQDG VGLSSSDDSFFFDPSIRSYFKNYIKTILTRKNTITGIEYRNDPTVFGWELINEPRCMSDPSGDTLQEWIEEMSAFVKLID KNHLVTVGLEGFYGPHDPKSSTVNPGYWASQVGSDFIRNSKISNIDFTSVHIYGDQWSYKQEFEDQLKFVSKWMLSHIED GDEVLHKPVLFSEYGLSQRIQNFSASDREKIHKTILDIIYKSAKRNKSGAGTLIWQFLVDGINEFSDEYGIVPGGNSSTY SLLVEQSCRLAKVKGWPQQDVKFKQVC
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 427 | 427 | 8.6E-250 | – | |
| Phobius | 1 | 5 | 5 | - | – | |
| PANTHER | 1 | 427 | 427 | 8.6E-250 | – | |
| Phobius | 6 | 25 | 20 | - | – | |
| TMHMM | 7 | 26 | 20 | - | – | |
| Phobius | 26 | 427 | 402 | - | – | |
| Gene3D | 37 | 414 | 378 | 1.1E-135 | – | |
| SUPERFAMILY | 40 | 403 | 364 | 2.15E-74 | ||
| Pfam | 77 | 376 | 300 | 2.6E-14 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity, hydrolyzing O-glycosyl compounds | Catalysis of the hydrolysis of any O-glycosyl bond. | ||
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. |
Expression pattern of LotjaGi3g1v0444900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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