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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0450800 |
| Transcript ID | LotjaGi3g1v0450800.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 14-3-3 protein-like protein; TAIR: AT2G42590.2 general regulatory factor 9; Swiss-Prot: sp|P42654|1433B_VICFA 14-3-3-like protein B; TrEMBL-Plants: tr|I3SI06|I3SI06_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0450800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:86429041..86431316) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCTTCTTCCAAGGATCGCGAGACCTTCGTCTACGTCGCCAAGCTTGCAGAGCAGGCTGAGCGATACGAAGGTTAGCG TTTCTTCCTTCGTGTCACTGCCTTGTTCGTGCAAATCGATTTGCTTGATTTCGTTGATTCCTACTCATGCGATGCTTCGT TGAACTTCTTTTGAGTAAATTTATGCTCTTTTTCTTCGATTTTATATCGTTATAGAGTTAATTTTTATTTTTGGAAAATT GGATCAGTGTTTACTGTCAGTTTGAATTCCAAGGAGACTATAAGAAAGGGCTTTAGTTAGGGTTAAGAGCCCTTTAACAG GAATTTAGTTTTTCAGTATTTTTATTTAATTTCTGTCAAAGTTTGTTCATTTTGAGCATGTGGGCATGTTGCTAATTCAA AATTTTGGTACTCTGCATGTTCAAGTGGTGGCATGATACTTAGGGTGTTTGAGTGTTTTTGTTGATCAAAGCATGTTGTT GTTCTTCCTGTGGAATTTTGTTATATTTGAAGGTTGATTTATGATGTTTTTTTTTTTTTTGCATTTGTTTTGACAGAGAT GGTGGATTCGATGAAGAAGGTTGCGAATTTGGATGTTGAACTGACTGTTGAAGAGAGGAATTTGCTTTCTGTGGGTTATA AGAATGTGATTGGTGCTCGCAGAGCGTCGTGGAGGATTCTGTCTTCCATTGAGCAGAAGGAAGAGACTAAAGGAAATGAT GTAAATGCGAAGCGGATTAAGGAGTACAGGCAGAAGGTTGAGTCAGAGCTTGCGGACATCTGTAATGATGTTATGAGGGT GATTGATGAACACCTTATACCTTCAGCTACTGCTGGTGAATCGACTGTGTTTTACTATAAGATGTGAGCATTGGTGTCTT GTTCTCTGCTACAGGTTTTGGTGTGTTTTTTTTTTCTTGTTTTTTTCCAAGTGGATTGTGCGATGATCGAATATTCTGCT TGCAGGAAAGGAGACTATTATCGTTATCTTGCAGAATTTAAGTCAGGCAATGAGAAGAAGGAGGCTGCTGATCAGTCAAT GAAAGCATATGAGGTGAGATTTATATTATTATATGTTGTTTTTGCAGTTTACAGGATATGTTTGTTTACTGGGTTTGTTA AAATTAGACATTGCAGTTTACACTTGAGACTTGAGAGGTTTCTTTTGGTCTTCATTTTTTATTTTGGTCAACTAAACACA CCTGTGGTTTGACCTTGGTCTTGTATTGAGTTCAAATTTCTAGTGCTTTCAAATAAGAACTTGTAATTGTTTCCTTCCTA GCATTCAATCAATATTTCCATTTGTATTTAGTTGCTTTTGTTGTATTGTATGCTCTATTTTTTTCTGAGGATCTGGCATG ATATTTAACAATATCCTTCCTAGCATTCAATCAATATTTCCATTGCAGTTTACACTTGAGACTTGAGAGGTTTCTTTTGG TCTTCATTTTTTATTTTGGTCAACTAAACACACCTGTGGTTTGACCTTGGTCTTGTATTGAGTTCAAATTTCTAGTGCTT TCAAATAAGAACTTGTAATTGTTTCCTTCCTAGCATTCAATCAATATTTCCATTTGTATTTAGTTGCTTTTGTTGTATTG TATGCTCTATTTTTTTCTGAGGATCTGGCATGATATTTAACAATATCCTTATTGAAAGAGCTGTTATTCAAAGGAGTTTC CTCTTCAGAATACTTTGTCCTTCTCTTACCTCAAATTTGTGTGTTTTATATATTGCAGTCTGCTACCACTGCAGCAGAGG CTGAATTACCCCCCACTCATCCCATCCGTCTGGGCCTGGCTCTAAATTTCTCAGTTTTCTATTATGAGATCCTGAATTCA CCTGAAAGGTTGGTAGGTTTGATTTATGTACTAAACTGTGATTGTAAATTGGTTTTTTTTTTTGAATGTGGTAGAACTTA TTTTCCTTCTTCCAGAGCCTGTCATCTTGCAAAGCAAGCTTTTGATGAAGCTATTTCAGAGCTTGATACCTTGAATGAAG AGTCATACAAAGATAGCACCTTGATCATGCAACTTCTCAGGGACAACCTTACTCTATGGACTTCTGACATTCCAGAAGAG GGAGGTAATTCTGACTAGAGGACTTATAGTTAACTGATTTATTACTTTGATTGGTCTAAATTCTATATTTCAATGGGTCT ATTAAGATGTGTAAGAAGAGTTTGGGATAATCGGTGAGGATATGACAAGGCAAGCTGTTACTAACAGTTATGAGATTATA ACTGCTAGGTTTGAAGCTAGAGTAACTCTTAGTTAG
CDS sequence (LotjaGi3g1v0450800.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTTCTTCCAAGGATCGCGAGACCTTCGTCTACGTCGCCAAGCTTGCAGAGCAGGCTGAGCGATACGAAGAGATGGT GGATTCGATGAAGAAGGTTGCGAATTTGGATGTTGAACTGACTGTTGAAGAGAGGAATTTGCTTTCTGTGGGTTATAAGA ATGTGATTGGTGCTCGCAGAGCGTCGTGGAGGATTCTGTCTTCCATTGAGCAGAAGGAAGAGACTAAAGGAAATGATGTA AATGCGAAGCGGATTAAGGAGTACAGGCAGAAGGTTGAGTCAGAGCTTGCGGACATCTGTAATGATGTTATGAGGGTGAT TGATGAACACCTTATACCTTCAGCTACTGCTGGTGAATCGACTGTGTTTTACTATAAGATGAAAGGAGACTATTATCGTT ATCTTGCAGAATTTAAGTCAGGCAATGAGAAGAAGGAGGCTGCTGATCAGTCAATGAAAGCATATGAGTCTGCTACCACT GCAGCAGAGGCTGAATTACCCCCCACTCATCCCATCCGTCTGGGCCTGGCTCTAAATTTCTCAGTTTTCTATTATGAGAT CCTGAATTCACCTGAAAGAGCCTGTCATCTTGCAAAGCAAGCTTTTGATGAAGCTATTTCAGAGCTTGATACCTTGAATG AAGAGTCATACAAAGATAGCACCTTGATCATGCAACTTCTCAGGGACAACCTTACTCTATGGACTTCTGACATTCCAGAA GAGGGAGATGTGTAA
Protein sequence (LotjaGi3g1v0450800.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASSKDRETFVYVAKLAEQAERYEEMVDSMKKVANLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEETKGNDV NAKRIKEYRQKVESELADICNDVMRVIDEHLIPSATAGESTVFYYKMKGDYYRYLAEFKSGNEKKEAADQSMKAYESATT AAEAELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPE EGDV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 243 | 243 | 2.0E-126 | ||
| PIRSF | 1 | 244 | 244 | 1.1E-119 | ||
| PANTHER | 3 | 242 | 240 | 1.0E-157 | – | |
| PANTHER | 3 | 242 | 240 | 1.0E-157 | ||
| SUPERFAMILY | 6 | 237 | 232 | 9.29E-107 | ||
| SMART | 7 | 243 | 237 | 1.1E-167 | ||
| Coils | 13 | 33 | 21 | - | – | |
| Pfam | 14 | 235 | 222 | 1.8E-107 | ||
| PRINTS | 39 | 68 | 30 | 2.7E-86 | ||
| ProSitePatterns | 45 | 55 | 11 | - | ||
| PRINTS | 88 | 112 | 25 | 2.7E-86 | ||
| PRINTS | 119 | 141 | 23 | 2.7E-86 | ||
| PRINTS | 154 | 180 | 27 | 2.7E-86 | ||
| PRINTS | 181 | 207 | 27 | 2.7E-86 | ||
| Coils | 195 | 215 | 21 | - | – | |
| PRINTS | 208 | 237 | 30 | 2.7E-86 | ||
| ProSitePatterns | 217 | 236 | 20 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0450800.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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