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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0456100 |
| Transcript ID | LotjaGi3g1v0456100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Sugar transporter, putative; TAIR: AT2G20780.1 Major facilitator superfamily protein; Swiss-Prot: sp|Q0WUU6|PLT4_ARATH Probable polyol transporter 4; TrEMBL-Plants: tr|G7KIS7|G7KIS7_MEDTR Polyol/monosaccharide transporter 1; Found in the gene: LotjaGi3g1v0456100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:86970045..86973234) extracted from Lotus japonicus Gifu genome v1.2.
GGGGGTTACATCTTACAAGCATATCTGTTGCCCTGAAAGCACCATTTAACCTTGATTATTGTCGGAGTCAAATCCTTAAA ACCGTGTCATATGAATGTAAAAAGTAAAAACTGAAGAAACATTGCTTCCTCTGCCTTTGCTTGCGTGACAAAAAGGGATT GGCACTTTGTACCCTGTTTGTTGCTCAGTCTTGTCCTCTAATCTCGGAGCTCCATTTTCTCCTTCAGTTTCAGTCTCAGA TCTAACACCCCAATCCATCATTTCCGTTTTCTTAGTCTGAGATATTTCATAGCATAGTCCAACCACTCAACGTTTGCAAC TTTTCACAACTTGTTGGTTTTAACAACAAAAACCACTCACCCCACGATTCTTTGTCCAATTGGGTGTCAGATTATAGCGA TGATGTTCCAGGAAAACGGGAATGGGGAAATGGGGTTGTCGGCAATCCCCTTGGGAGCAAAGAACAAGTACAGGAGGATG GACTCTCAGCTTCCTGAGGATAACGATGATGATGTTCTGCACCAACAGCAACGAGAAGATAAGAGGAACAGCACCAGGAA ATATGTGATTGCATGTGCTATCTTTGCTTCTCTCAACAATGTCCTTCTTGGCTATGGTATGTTGAAAAGTCCTGATTTTG TCAAAACCATCTTCAATTTTGTTGCTGCATTTTTCATTGACTGTGATATTTAGATTGTGTTGACCAATTCTGTTTCATGT CTCATGTCTGATTCATCTTTGCATTCTTAGTATCAATGATATCAGATCTACCAGATTTTGGGTTCAGGGTTTGGCCATCT GAGAGATTTCAACTATATCTTGATTAATTAGTGGTTTTTGTTGTGGATATTATTTTGATTTTCAAATCTAATTCCAGAAT CACATAAACATATTTTTTGCTCAGAATCAGTTCTGGCTAGCACCCAGAAACTAGTTGCATAAGCTTCTCCTTTTGAATTG ATTTTGACTTTTGAATCAATTGTAGAAGGATTTCCAAACATGCATAAAAGTTCACTTGAATTAATCTTTGGATTTTGCAG ATGTAGGAGTGATGAGCGGAGCAGTACTATATATTAAAAAAGATCTGAAGATATCCGAGTTTCAGGTTGAGTTTTTGATT GGTATTCTGAGCATTGTTTCTCTACTGGGTAGCTTGGCTGGTGGAAGAACAGCGGATATTATTGGTAGAAAATGGACAAT GGGCTTAGCTGCAATTATCTTCCAAATGGGTGGACTCACAATGACTTTTGCTCCTTCATATGCAATACTAATGGTCGGAA GATTTCTAGCTGGGATTGGAATAGGGTTTGGAGTTATGATCTCCCCTATCTACATCGCTGAGATCTCACCAAACCTCACT AGAGGCTCTCTCACTACCTTCCCTGAGATTTTTATAAATGTAGGAATCTTGCTTGGTTATGTATCAAATTACGCGTTTTC TGGCTTTTCGCCACACATAAGCTGGAGAATAATGCTTGGTGTGGGAATTTGGCCCTCAGTGTTCATTGCCGTTGCTCTTT TCATTATTCCTGAGTCCCCAAGGTGGTTGGTAATGCAGAACCGAATTGATGAAGCTAGATCAGTGCTGTTGAAAACAAAT GAAGATGAGAAAGAAGTGGAGGAGAGGCTTGCAGAAATACAACAGGCTGCTGAATTTTCCAATTCTGATAAGTATGAGGA GAAACCAGTATGGCGTGAACTGCTATCTCCTTCTCCGGCACTTCGCAAGATGCTGATTACTGGACTCGGGATCCAATGTT TTCAACAGATCTCGGGAATTGATGCAACTGTGTATTACAGTCCTGAAATTTTGCAAGCTGCTGGGATTGAGGATGATTCA AAACTTTTAGCTGCAACTGTTGCTGTAGGTGTAGCAAAAACCATTTTTATTTTGGTAGCCATAGTTCTCATTGACAAAGT AGGTAGAAGGCCCCTTCTCTTGACAAGCACAATTGGCATGACAGTTTGTTTGTTCAGCATGGGGGCTACTCTTGCTTTGT TTGGAAAAGGGTCGATTACGATTGCATTAGGTATTCTTTTTGTTTGTGGGAATGTAGCATTCTTTTCAGTTGGACTAGGT CCTGTGTGCTGGGTTTTGACATCTGAAATCTTCCCTTTGCGAGTGCGCTCTCAAGCATCTGCGCTTGGAGCTGTGGCTAA TAGGGTCTGCAGCGGCATTGTAGCCATGTCTTACCTGTCTATATCTGAGGCAATTACTTTTCCTGGAACATTCTTTTTGT TTTCTGCTATTTCTGCTCTTGCCATTGTCTTTGTCTTCACACTTGTACCTGAAACCAAAGGGAAGTCATTGGAGCAGATA GAGATGATGTTTCAGAATGAACACGGGAATCTAGAAAAGGAAATGGAGCTAGGAGATGGGGAACAACTTGTGCAGAAGCA GCTGAACAAAACTGAGTTAACAAATTAAGTTATCACCCCTCGTCTTTCGATGACTATGATAGGTGTCATGACCCTGATGA TTTTGTCATTGCATAGCTACACATACTTCATTTGTTAAGGCTTTATGAATCTTGTGATTCCGGGGAGGACTTTACTGGCA TGGATGGATATGATCTTCTGCAGCCAGAGAATTTGAGATCTGTGAGTAAGGGACATAGAAGCCTTTGAGACAAATTGCAT TCTCACAGTATACACAAACTTTTCCTAGCTGTACAATTATTCTATTTGTTTAGTTTCATTTAAGACAATAATAACATTGT ATATGGAAGGAGATTTTTGGTGGAGATAATCTTGTCTCCATATGGTCTTATGAGATGTTCTGGGACAATTGATAGTACCA TCACTCCATGAGGGATGTAATTAATATGAAATTCTTTAACAGATTATATTCTTTCAATTCTAGTGTTTGAATTGTCATCA TCTTGGACCTCAAAGCAAATATGTTCAGTGTCATGGGTCAAGTTTGGATTAGGTTCTAGTTTATGGGAGTTTTAGCTACT CATAAAAGACCTTATGAGTTTATAGGTATGTATGGAGAAGTTAGATGAGAGAACTTCTAAAAAGTTTAGGTGCTAAAGTT TATTTAAATTTATGTGGGAAACTATTATTTAGAAGAGTAAAGACTCATTGTTATGACAAGGTCATTTTAACTTTTCTTTT GTTTAAGTATTCAAACTGGCTCATAATGTAATTGGCAATAAGCTGGCCTCCTTTGATCAAAGTAATTTTT
CDS sequence (LotjaGi3g1v0456100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATGTTCCAGGAAAACGGGAATGGGGAAATGGGGTTGTCGGCAATCCCCTTGGGAGCAAAGAACAAGTACAGGAGGAT GGACTCTCAGCTTCCTGAGGATAACGATGATGATGTTCTGCACCAACAGCAACGAGAAGATAAGAGGAACAGCACCAGGA AATATGTGATTGCATGTGCTATCTTTGCTTCTCTCAACAATGTCCTTCTTGGCTATGATGTAGGAGTGATGAGCGGAGCA GTACTATATATTAAAAAAGATCTGAAGATATCCGAGTTTCAGGTTGAGTTTTTGATTGGTATTCTGAGCATTGTTTCTCT ACTGGGTAGCTTGGCTGGTGGAAGAACAGCGGATATTATTGGTAGAAAATGGACAATGGGCTTAGCTGCAATTATCTTCC AAATGGGTGGACTCACAATGACTTTTGCTCCTTCATATGCAATACTAATGGTCGGAAGATTTCTAGCTGGGATTGGAATA GGGTTTGGAGTTATGATCTCCCCTATCTACATCGCTGAGATCTCACCAAACCTCACTAGAGGCTCTCTCACTACCTTCCC TGAGATTTTTATAAATGTAGGAATCTTGCTTGGTTATGTATCAAATTACGCGTTTTCTGGCTTTTCGCCACACATAAGCT GGAGAATAATGCTTGGTGTGGGAATTTGGCCCTCAGTGTTCATTGCCGTTGCTCTTTTCATTATTCCTGAGTCCCCAAGG TGGTTGGTAATGCAGAACCGAATTGATGAAGCTAGATCAGTGCTGTTGAAAACAAATGAAGATGAGAAAGAAGTGGAGGA GAGGCTTGCAGAAATACAACAGGCTGCTGAATTTTCCAATTCTGATAAGTATGAGGAGAAACCAGTATGGCGTGAACTGC TATCTCCTTCTCCGGCACTTCGCAAGATGCTGATTACTGGACTCGGGATCCAATGTTTTCAACAGATCTCGGGAATTGAT GCAACTGTGTATTACAGTCCTGAAATTTTGCAAGCTGCTGGGATTGAGGATGATTCAAAACTTTTAGCTGCAACTGTTGC TGTAGGTGTAGCAAAAACCATTTTTATTTTGGTAGCCATAGTTCTCATTGACAAAGTAGGTAGAAGGCCCCTTCTCTTGA CAAGCACAATTGGCATGACAGTTTGTTTGTTCAGCATGGGGGCTACTCTTGCTTTGTTTGGAAAAGGGTCGATTACGATT GCATTAGGTATTCTTTTTGTTTGTGGGAATGTAGCATTCTTTTCAGTTGGACTAGGTCCTGTGTGCTGGGTTTTGACATC TGAAATCTTCCCTTTGCGAGTGCGCTCTCAAGCATCTGCGCTTGGAGCTGTGGCTAATAGGGTCTGCAGCGGCATTGTAG CCATGTCTTACCTGTCTATATCTGAGGCAATTACTTTTCCTGGAACATTCTTTTTGTTTTCTGCTATTTCTGCTCTTGCC ATTGTCTTTGTCTTCACACTTGTACCTGAAACCAAAGGGAAGTCATTGGAGCAGATAGAGATGATGTTTCAGAATGAACA CGGGAATCTAGAAAAGGAAATGGAGCTAGGAGATGGGGAACAACTTGTGCAGAAGCAGCTGAACAAAACTGAGTTAACAA ATTAA
Protein sequence (LotjaGi3g1v0456100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MMFQENGNGEMGLSAIPLGAKNKYRRMDSQLPEDNDDDVLHQQQREDKRNSTRKYVIACAIFASLNNVLLGYDVGVMSGA VLYIKKDLKISEFQVEFLIGILSIVSLLGSLAGGRTADIIGRKWTMGLAAIIFQMGGLTMTFAPSYAILMVGRFLAGIGI GFGVMISPIYIAEISPNLTRGSLTTFPEIFINVGILLGYVSNYAFSGFSPHISWRIMLGVGIWPSVFIAVALFIIPESPR WLVMQNRIDEARSVLLKTNEDEKEVEERLAEIQQAAEFSNSDKYEEKPVWRELLSPSPALRKMLITGLGIQCFQQISGID ATVYYSPEILQAAGIEDDSKLLAATVAVGVAKTIFILVAIVLIDKVGRRPLLLTSTIGMTVCLFSMGATLALFGKGSITI ALGILFVCGNVAFFSVGLGPVCWVLTSEIFPLRVRSQASALGAVANRVCSGIVAMSYLSISEAITFPGTFFLFSAISALA IVFVFTLVPETKGKSLEQIEMMFQNEHGNLEKEMELGDGEQLVQKQLNKTELTN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 54 | 54 | - | – | |
| SUPERFAMILY | 27 | 500 | 474 | 6.02E-75 | ||
| PANTHER | 32 | 524 | 493 | 8.5E-260 | – | |
| PANTHER | 32 | 524 | 493 | 8.5E-260 | – | |
| TIGRFAM | 47 | 499 | 453 | 2.9E-106 | ||
| Gene3D | 48 | 507 | 460 | 5.9E-130 | – | |
| TMHMM | 55 | 77 | 23 | - | – | |
| Phobius | 55 | 83 | 29 | - | – | |
| ProSiteProfiles | 59 | 492 | 434 | 51.191 | ||
| Pfam | 59 | 503 | 445 | 3.8E-109 | ||
| CDD | 62 | 499 | 438 | 0.0 | – | |
| PRINTS | 67 | 77 | 11 | 4.1E-24 | ||
| Phobius | 84 | 94 | 11 | - | – | |
| TMHMM | 92 | 114 | 23 | - | – | |
| Phobius | 95 | 114 | 20 | - | – | |
| ProSitePatterns | 113 | 130 | 18 | - | ||
| Phobius | 115 | 125 | 11 | - | – | |
| Phobius | 126 | 148 | 23 | - | – | |
| TMHMM | 127 | 149 | 23 | - | – | |
| Phobius | 149 | 153 | 5 | - | – | |
| PRINTS | 150 | 169 | 20 | 4.1E-24 | ||
| TMHMM | 154 | 176 | 23 | - | – | |
| Phobius | 154 | 171 | 18 | - | – | |
| ProSitePatterns | 155 | 180 | 26 | - | ||
| Phobius | 172 | 182 | 11 | - | – | |
| Phobius | 183 | 200 | 18 | - | – | |
| TMHMM | 189 | 208 | 20 | - | – | |
| Phobius | 201 | 211 | 11 | - | – | |
| Phobius | 212 | 235 | 24 | - | – | |
| TMHMM | 213 | 235 | 23 | - | – | |
| Phobius | 236 | 302 | 67 | - | – | |
| Coils | 248 | 282 | 35 | - | – | |
| Phobius | 303 | 326 | 24 | - | – | |
| PRINTS | 314 | 324 | 11 | 4.1E-24 | ||
| Phobius | 327 | 340 | 14 | - | – | |
| TMHMM | 341 | 363 | 23 | - | – | |
| Phobius | 341 | 363 | 23 | - | – | |
| ProSitePatterns | 359 | 376 | 18 | - | ||
| Phobius | 364 | 369 | 6 | - | – | |
| Phobius | 370 | 394 | 25 | - | – | |
| TMHMM | 373 | 395 | 23 | - | – | |
| Phobius | 395 | 399 | 5 | - | – | |
| Phobius | 400 | 426 | 27 | - | – | |
| TMHMM | 402 | 424 | 23 | - | – | |
| PRINTS | 404 | 425 | 22 | 4.1E-24 | ||
| PRINTS | 427 | 439 | 13 | 4.1E-24 | ||
| Phobius | 427 | 437 | 11 | - | – | |
| Phobius | 438 | 460 | 23 | - | – | |
| Phobius | 461 | 465 | 5 | - | – | |
| TMHMM | 463 | 485 | 23 | - | – | |
| Phobius | 466 | 488 | 23 | - | – | |
| Phobius | 489 | 534 | 46 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi3g1v0456100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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