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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0456600 |
| Transcript ID | LotjaGi3g1v0456600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | carboxyl-terminal peptidase (DUF239); TAIR: AT2G35250.1 NEP-interacting protein, putative (DUF239); Swiss-Prot: sp|Q4LAK0|PURA_STAHJ Adenylosuccinate synthetase; TrEMBL-Plants: tr|I3SWN5|I3SWN5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0456600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:87006484..87008852) extracted from Lotus japonicus Gifu genome v1.2.
TAAGCTTGCACACATAACTAATATATATCAATAACTAAGATTGTTTTAAGGAAATTATGAAAATAATATTTCTCTTTCTG ATTGTTAGTTTTTGTGTACAAGGCTATGAAATTGATGGAGGAAGAATACACAAACCAAAGAAACAACAATTTCATAGATT ACATGACCACCAAAGCACCCAGGTATTGCATTCTTAACTTGTCCTATCTAAAGTCTTTGATTTATTGCTGACTTATTTTT TTTAGAGCAAAAAGGATTTATTCAAATTCAAAGGATATTGCTGACTTATTTAAATCACATATGCTTAATAAATGCAGGGT TCAATAGATGATGATTTTGATTGCGTTGAAATTTATAAGCAACCTGCTTTTCAACACCCTTTACTAAAAAATCACAAAAT TCAGGTAAATATCCTTATTGTTTGAGCCTTTCTTATTGTTTTCCATTCTTATGTAACCATCACCGGACCTTGCACGAGGA AATCATTTTTTGTATTAATTCTTATATCCTTTATCTTTTTAGATTTTAATTGTAAATTTTGTATCTAATATATTTTTCTC ATTTAACAAAGCTTTTTCCAACTTTTATGAGGACTCGCATGCAAAATAGATCATCTTACCTTGGTAAAGCTAACAAAGAT GAAAATTCCATGAGAGGATGTCGTCCCGGTAAAGTGCCCATTATCAAGACAACAATGAGACAGAAGTTGAAAACTCATCC ATCTTCAAGATCCGAACTTGATAATTTTACTCAATATTCTAAAAGTTACCCTGGGCATCATGTAAGTCGATTAATTTTAA GTATTTTGTTTTCAAACTTTTTATTTGATTGATTATTATTAAAATATTTATATAGAAAATCATTTTGGTTTAAAAAATAT AGAAACATTACTTTATTTTTTTTACTCTTCCCTATTTAAATTTTCATTACTATACTACCTAACATATATTTTCAATTTAA AACACATTTAGTTATAAAAGAAGCAAATAAGCTGGTCTAATGTGTAATTATTGTCAATAATGCTGACTTCATAATTAATT ATATTTTCATTATTAAATCTTTTAAACTAATTATTACATATAAACATGTCTACTCATTTTCTCATATCTTATCCTCCTCT AGTTTGCTACCCTGGATACAACCCAGGATATAACGTTTCATGGAGCAAGTGCAGCTATTAGCACGTATAATTTATCGCTT CATGCAAACCAATATAGCATATGTGGATTTTGGATTCAAAGTGGTCCACCTACAGAACTCAATAGTATACAAGTCGGAAC CGGTGTAAGTGACTTCTTATCTTGTTTATGATTTTTTTAGGTTTCATAACATAGTAAAACTTTTGAGAATAATGTTATAA TTTAAATGACCTTATTTAATTTGTTCTTAATTTTTTTCCTTTATTTTATTTATTCTATGTATTTTATTTCTAATTATAAT AACATTATTGTGCAAGATTCATCCTAGCTTGTATGGAGACCATCAAATACGTTTAACTGCACATTGGACAGTAAGACTTA TAAATTAATGGATTGTATTTTCTTTCTAAATTACATAATATGTTTATGCTTTTTTAAATAAATACATGCAGGCAGATGGC TATCATAAAACTGGATGTTTTAATCAACTATGTCCAGGTTTTGTGCAAGTCCATTCACAATTTAGCTTAGGAGAAGTCTT AAAGCACAGCTCTGTTATTGGATCAGAAGAAAAATATTTATCAGATATAAAAGTCAAACAGGTAACATAATTTAAATATA TACGGCTGTAGCAAATTGATAATCTATTGACCTAGATTTAAAATCCTCTTAAATATGTCTTTGGGAAATATCTTCATTTT TTAATTGAATCATTATTTGTAGGATAAATTCACAGGTCATTGGTGGTTGTTTGGTAGTCTTGATCATATTCCAATGGGAT ATTGGCCTAAACAAATATTTACTCACTTAAGTAAGGGTTCGTCTTTGGTTAGATATGGTGGTGAAACATTTGCTCCGCCC AATACGATTAGTCCCCCAATGGGTAGTGGAAGATTGCCTCAAGAGTTATTCAAAAACTCGGGTTACATTGCAGATCTAAT GATTGTGGATTCAAATTACAATGAAGTTGAAGTAAATTCCAAGTACATGAAGCCAAATTGTGACACAACATCTAATTGTT ATGACGTGTTGTATCATGGTTATGAAGGACCTTTTTATCGCCAAGCCTTTCTCTTTGGTGGGCCAGGTGGGCAATGCGGT ATATGATCATATTCAAAACTTTATTTAATAAAAGGTTGTTTATTATAGATTTGGATTCTTGGAAGTTGGAACTTAGTATG AATAACAATAAATATATATTTATGTTCAGTTGAATAAAAGTTTGAGGAA
CDS sequence (LotjaGi3g1v0456600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAAATAATATTTCTCTTTCTGATTGTTAGTTTTTGTGTACAAGGCTATGAAATTGATGGAGGAAGAATACACAAACC AAAGAAACAACAATTTCATAGATTACATGACCACCAAAGCACCCAGGGTTCAATAGATGATGATTTTGATTGCGTTGAAA TTTATAAGCAACCTGCTTTTCAACACCCTTTACTAAAAAATCACAAAATTCAGCTTTTTCCAACTTTTATGAGGACTCGC ATGCAAAATAGATCATCTTACCTTGGTAAAGCTAACAAAGATGAAAATTCCATGAGAGGATGTCGTCCCGGTAAAGTGCC CATTATCAAGACAACAATGAGACAGAAGTTGAAAACTCATCCATCTTCAAGATCCGAACTTGATAATTTTACTCAATATT CTAAAAGTTACCCTGGGCATCATTTTGCTACCCTGGATACAACCCAGGATATAACGTTTCATGGAGCAAGTGCAGCTATT AGCACGTATAATTTATCGCTTCATGCAAACCAATATAGCATATGTGGATTTTGGATTCAAAGTGGTCCACCTACAGAACT CAATAGTATACAAGTCGGAACCGGTATTCATCCTAGCTTGTATGGAGACCATCAAATACGTTTAACTGCACATTGGACAG CAGATGGCTATCATAAAACTGGATGTTTTAATCAACTATGTCCAGGTTTTGTGCAAGTCCATTCACAATTTAGCTTAGGA GAAGTCTTAAAGCACAGCTCTGTTATTGGATCAGAAGAAAAATATTTATCAGATATAAAAGTCAAACAGGATAAATTCAC AGGTCATTGGTGGTTGTTTGGTAGTCTTGATCATATTCCAATGGGATATTGGCCTAAACAAATATTTACTCACTTAAGTA AGGGTTCGTCTTTGGTTAGATATGGTGGTGAAACATTTGCTCCGCCCAATACGATTAGTCCCCCAATGGGTAGTGGAAGA TTGCCTCAAGAGTTATTCAAAAACTCGGGTTACATTGCAGATCTAATGATTGTGGATTCAAATTACAATGAAGTTGAAGT AAATTCCAAGTACATGAAGCCAAATTGTGACACAACATCTAATTGTTATGACGTGTTGTATCATGGTTATGAAGGACCTT TTTATCGCCAAGCCTTTCTCTTTGGTGGGCCAGGTGGGCAATGCGGTATATGA
Protein sequence (LotjaGi3g1v0456600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKIIFLFLIVSFCVQGYEIDGGRIHKPKKQQFHRLHDHQSTQGSIDDDFDCVEIYKQPAFQHPLLKNHKIQLFPTFMRTR MQNRSSYLGKANKDENSMRGCRPGKVPIIKTTMRQKLKTHPSSRSELDNFTQYSKSYPGHHFATLDTTQDITFHGASAAI STYNLSLHANQYSICGFWIQSGPPTELNSIQVGTGIHPSLYGDHQIRLTAHWTADGYHKTGCFNQLCPGFVQVHSQFSLG EVLKHSSVIGSEEKYLSDIKVKQDKFTGHWWLFGSLDHIPMGYWPKQIFTHLSKGSSLVRYGGETFAPPNTISPPMGSGR LPQELFKNSGYIADLMIVDSNYNEVEVNSKYMKPNCDTTSNCYDVLYHGYEGPFYRQAFLFGGPGGQCGI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 2 | 2 | - | – | |
| SignalP_EUK | 1 | 16 | 16 | - | – | |
| Phobius | 1 | 16 | 16 | - | – | |
| Phobius | 3 | 12 | 10 | - | – | |
| Phobius | 13 | 16 | 4 | - | – | |
| Phobius | 17 | 390 | 374 | - | – | |
| PANTHER | 40 | 387 | 348 | 1.0E-118 | – | |
| PANTHER | 40 | 387 | 348 | 1.0E-118 | – | |
| Pfam | 47 | 144 | 98 | 7.2E-14 | ||
| Pfam | 160 | 384 | 225 | 6.1E-63 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0456600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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