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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0458900 |
| Transcript ID | LotjaGi3g1v0458900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase-like protein; TAIR: AT1G03520.1 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; Swiss-Prot: sp|Q9LFQ0|GT14B_ARATH Beta-glucuronosyltransferase GlcAT14B; TrEMBL-Plants: tr|I1LRY0|I1LRY0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0458900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:87350369..87355550) extracted from Lotus japonicus Gifu genome v1.2.
TGGAGGAAAAAAATAATAATATCTCTTATAAGAGAATGTTAATGTGCAGTTTTAAGATGAAAAGAGGAAGCTGAGCTGAG AAAGAGTGCGGTTTTAAGATTAAGTCATTCATGGAGCCCATAGAATTCATTGTTCAGGTTACAATGAAATTGAAAACTGC ACGCACCTTGAACAAGAAACTAACGTGTAAAGCTAAGCTTACATAAGTAATAAATAAATATTTACATTAATATAACCGAA GCATGCTTAATTGCTTATGTTTATGAATATTAAAATCCACAAAAATTAACGTCAATAATGAAATTTTGCCAACCATCAAA GCAATGCTTGTCACCACCATTCCAAAATCTGTTGCCACCCAGAATCACAATGGCTCCAACTGTACACAACCCCTTCTAGA AGACACGGTTCCTGTTTTTTTTTTCCTTATTTTCCTCAAACATGTCATAAAATTCTAGTACTTTGAATTTTCATTGAATC CTCTCTCTTTCTTCTTCTTCTTCTTCTTCTGATTGGTTTGGACCATTTTTTTCTTAAACTAATCCTCTCTTTAATCTCAA GTTACCCAAAACTTTGACTTCAAGTGTGTTCTGAATCTTCTGATTGTTCTGTTCCTTTTATGGTTTTTATATTCATTTTT GGAGTGGATCTTGGATTGGAGCACAGTTTGCAGGACTACCCAAAAACACAAAGGTAAAGTACAATGAATAAGAAGCTGAA TTTGAATGTCTGCAGGTGAAATCAGAACTAAAGATGGTTTTTTTCTTAGTTTCTATTCTAGCAGAAGATAAAGGGGTGAA GTAAATCATCTTGAGGTTTCAAAAATTGTTCCTTTCTGATGATGAGGGAGTAATCAGGTGGGTCCCAATTCTCCGACCTA AATGTTTGTCATATCATGTGTTACCTAGATAGCTCCAAAATCAAAATCTTTAGCAATGGGGCGTGGATTGATGCCGATTG TGAATGAAGTTTCTGTGCTTGAAAACCATGTTTTATCCTGCAGAAAACATGGACTTTGTTTTGCTTAAATGCTAGCTTAG CTGTATTTGCTAAGGAGGTGGCTTTTGTTCTGTTGCTGAAACCACTTCTACTATTTTCTTGTCTTTTAGAGATTTGTGGG GTTCTTGCTGCTTTGGGTTGAGTACTCATCATTGTTTATTTGGTTCTTGCCCCTTCAAGGGAATCTGCTCCAAAAATTGG TTTTGATTTAGTAGTTTTAAAAGAGTATGAGGAAAAATGGGGGTTCTCATTCAGGAAGGATGTTTAGTGACAGGAAGTGG ATTATCCCGTTTTTCGCAAGTTTGCTTGTATCTGTGAGTCTGCTTCTCACATCTTTTCTTGGGGTGCTTAGTTCTGCTGG GGGTGGGGGAGAGCAGGCACCATTTGACATTATTTCATTCAAGAGATCAGAAGATTCCAGTGGATATTTTGTAGAATCGG AATTGGGAAGTTCTCTCAATGCTAGTGTTCTTGTTAAAAAGGAAGCACCTAGGTTTGCATATCTTATCTCAGGCACCAAG GGTGATAGTCATAGGTTGTTGAGGACATTAGAGGCAGTGTATCATCCAAGGAATCAGTACATCTTGCATTTGGATCTTGA GGCGCCGCCCCGGGAAAGGTTGGAATTGGCAAATACAGTGAAGGCAGATCCAGTATTTCGTGAAGTCGAGAATGTGCGTG TTATGTCTCAATCCAATTTGGTAACCTATAAGGGTCCTACAATGATTGCTTGTACCCTGCAAGCTATTGCAATACTATTG AAGGAGAGTTCAGAGTGGGACTGGTTTATAAACCTCAGTGCCTCAGATTATCCTCTCGTGACACAGGATGGTAAGTAAAT GACCTTTTCTCTGCTTCTTGATGTAATATGTTATTATTCATGTAAAAATGCTTGCATAAACTATGGCCTTCTAGGTTGTG GAAGGATAAGTACCCTTTACAAGCTGTCCTTCAGGTTTAAAGACATGATGTTTAAGCCATACATCTTAGCATGTGGTTGA CTTGTTTCCCTTGAGCACTAACCTATTGTTTAGAGGGTAGAAACGATTATTAAATTAGGCATTTAATGTTTTAGGGACAG GAAAGTTTATTAAAGTTCATACATCCCTTGATTATTGTCTAGGTTTCAAGATGGGTCTCTATCTAACATCATTAGTTTTG TTTAAACAACCAATGATTGAATTAATTGGTTATATAGTCTCGAAATGTTTTGTTGTTTTTTTCCCTTTTCATGTATGTTG TCTTCTTCAATAGTAGAAGGTTAGCAAATGAAATTGGGGTTAAGGCCTTTAGCTAATGAACTAAGTTTGTTTATCTGGTT TGTTGCCAAATTATTATTTTGTTTATCTTTGTAATTCTATTGTTTGATAGTGATCCTTAGTCTAGTAAATTCTCTATCTA ATCTTCGTTGGAATCTTCCGCCACAACCATTCTTGCCTAAACCACAGTGATTTTCAGTAGTTCAGGGACGAGCCATGCTC CTGGAGTAATGATGTTAGACATAAATTAGTTATGTCGTTTCACCTCTGATGTGCTTAAGTGTAACAAACAGTCTTAAAAT ATTATAGAGTCTATAGACCTTGACAATTCTGCCATTCAGGCTATTTTGACACTGCACATGTTGCTACTGGCTTTGGTTTG CTGGTCGCCCTATTGCTCAGCAAATGCAATGTCCATTTGAATAACCCCCCATAAATTAGCTTTGTCAAGATCTGTAGACA ACAATAATAACCGAATCTTATCCCACTTGATGTCAAATTTTGAAGTCTTACTTTATCGAAGGTTTTTTTTTGTATGCCTT GTCACCAATACTATTCCATCCCTGTGTTTCTGCTAGAGTTCCCTCCAAGTGCATTTTATGTAGATATTTGAGAAGTTTGT CTAGATATCAAGGTCAATTTTGTTGTTAATACCTGCTGAATCACATTCCTGAGCTAGAACTTCTAGCACAAATGCTAAGC AAGATTTTTCGTGATCTTCATACTACATCATATATTACATGGTGCTTCTTTCCATAAATTGTCGATTAATTTTCTGGATA GTCTAAAACTTGTTTTCCACATAGATTTTTTGTATCTAGTACAAGTGGCCTCGTCTAAAGTGAGCTTATCTCTGAAATTA ATAAAAATATATCCATCCTTGGTCCCCCAAAACTCAAGGGTAATGGCATCATTACTTGCTCACTTCAAAAGTTCACTTTA GAGGGTTATCTTTCAATCTAAGCAGTTGCTGATTCTTCTCAGAAATCACAGCTTCAATAATGGATATATGTGGGACACAT AATATGAGTCAGATTAGGTTTATTCTAGGGAAAAAAACTACTGCTGTAAATGACGGTGAAGTATGGGCTGGATTAGAGTG TTAAACGATAGTTGTCCCTCTGAAGTATGTTGATTAAATACATACTGCAAGTCTAAACTTGTGATGTGTTGTCAAGTGTA AACTGATATAAGTTTTGATACCAATGAAATTTCTAGCTCCTGCGTAACTATTTGCTTGGGGTATTTTGTATTCAATAATT TGAGTCTTCTCCTATCAGCGTCTTCTTTGCTGCAGATATACTTATTTTATAACTTTTACCATAAATCAATCTTCATATAG CTCATTTCATGGTTTTTGGAGTATGCTTTTAATTGAATTCCATGAGTTGCATGAAGTCTAGATTTCTGTGAAGTCTCTAC TCACTTTATATTTGTTTCCTGCTGTTGCAGATTTGCTTCATGTTTTCTCGAATTTATCTAGAGATCTCAATTTCATTGAA CATACACGTTTTACTGGTTGGAAACTGTAAGTGAATTGTCTCATCACGTATCTGAAAATTGTTATTAAGTGTCATTTGAT TAAGATTTCTTTGTGTTACTGCATATATGTTCAGGAACCAGAGAGCAAAACCAATCATTGTTGATCCTGCCCTTTACTTA TCAAAGAAATCTGATTTAGCTTTCACTACTCAACGAAGAACACTTCCCACGGCTTTTAAACTGTTCACCGGTATGTCCGT ATCTAAAATTTATTTTCTGCTATACATTCAAACTAAAAGGCCCTTTGAAGAGAGATAGCAGGGCCAAGATTGTAGAATAT CTTGTTGGCTTGCCAGATTATGAGCATGTTTGGATGCAGAGTAAAGAGCACTTATTGGAGTTTATCCAGTGCTTTTTCTA GTAAATAAGCTCGAAAGTGTTCTTTAGTTTGTATCCTAACGAGATGGATATTTGCTTGCTATTAGATTTTTTTTTTTATA GGCAACCAAATCCAACATGGTAGATCCCTATACATTTTGACTATGCTCTGTGAACAGGTTCAGCTTGGGTTGTGCTAACT CGGTCCTTTGTGGAGTACTGTATATGGGGATGGGATAACTTTCCAAGGACTATGCTTATGTATTATACAAACTTTGTCTC TTCGCCTGAGGGATATTTTCATACTGTTATTTGTAACACTAAGGAGTTCCGGCATACAGCGATAAGCCATGATCTTCACT ACATTGCTTGGGACAATCCCCCAAAGCAGCATCCAATGTCTTTGACTATGAAAGACTTCGAAAAAATGGTTAAAAGCAAT GCTCCGTTTGCTCGAAAGTTTGCGAAGGATGATCCCGTTCTCGACAAGATTGACAAAGAAGTTTTGGGTCGTACACATAG ATTTTCACATGGAGCATGGTGTGTTGGGACCTTAGATGCTGGGGCAGACCCTTGTTCTGTGCGTTGCAATGATACAGTGT TTAGTCCAGGCCCTGGTGCTGAGAGATTACATGGGCTGCTTCAGGTGCTGTTATCTGAAGAATTTCAAAGCAAGCAGTGT TTGTGACGAAAGGGGTAACCTCCACTAAGATAATGTCAAGTGTACATAGTGTGGTTATAGATCATACATGTCTGATGTAA AATATCAGAATTTTGTGTTCAAGATTATAGTAAGAAACAACAAGCACTCAGGTAGCAGTTTTCTGGTGCTTGTTTTGGTT GCAATTCCAGCCAACCATTTACAAATTACAACCATTTTTTGTTATGTTACAAAAACAATTAAATTTCAGAGTAATTTTTA ATTGGTTATCGATTCTCCTATGGACAAATTCTTAGGTAGCAACTTCTTGTTATAGGCAAGGATGGAATCGGAAAAAATTG ATTCGGCAAGCGGAAATTTGACACATTATGCAAAATCAACAGTGTTTCATTGGAGTAGGCAA
CDS sequence (LotjaGi3g1v0458900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGGAAAAATGGGGGTTCTCATTCAGGAAGGATGTTTAGTGACAGGAAGTGGATTATCCCGTTTTTCGCAAGTTTGCT TGTATCTGTGAGTCTGCTTCTCACATCTTTTCTTGGGGTGCTTAGTTCTGCTGGGGGTGGGGGAGAGCAGGCACCATTTG ACATTATTTCATTCAAGAGATCAGAAGATTCCAGTGGATATTTTGTAGAATCGGAATTGGGAAGTTCTCTCAATGCTAGT GTTCTTGTTAAAAAGGAAGCACCTAGGTTTGCATATCTTATCTCAGGCACCAAGGGTGATAGTCATAGGTTGTTGAGGAC ATTAGAGGCAGTGTATCATCCAAGGAATCAGTACATCTTGCATTTGGATCTTGAGGCGCCGCCCCGGGAAAGGTTGGAAT TGGCAAATACAGTGAAGGCAGATCCAGTATTTCGTGAAGTCGAGAATGTGCGTGTTATGTCTCAATCCAATTTGGTAACC TATAAGGGTCCTACAATGATTGCTTGTACCCTGCAAGCTATTGCAATACTATTGAAGGAGAGTTCAGAGTGGGACTGGTT TATAAACCTCAGTGCCTCAGATTATCCTCTCGTGACACAGGATGATTTGCTTCATGTTTTCTCGAATTTATCTAGAGATC TCAATTTCATTGAACATACACGTTTTACTGGTTGGAAACTGAACCAGAGAGCAAAACCAATCATTGTTGATCCTGCCCTT TACTTATCAAAGAAATCTGATTTAGCTTTCACTACTCAACGAAGAACACTTCCCACGGCTTTTAAACTGTTCACCGGTTC AGCTTGGGTTGTGCTAACTCGGTCCTTTGTGGAGTACTGTATATGGGGATGGGATAACTTTCCAAGGACTATGCTTATGT ATTATACAAACTTTGTCTCTTCGCCTGAGGGATATTTTCATACTGTTATTTGTAACACTAAGGAGTTCCGGCATACAGCG ATAAGCCATGATCTTCACTACATTGCTTGGGACAATCCCCCAAAGCAGCATCCAATGTCTTTGACTATGAAAGACTTCGA AAAAATGGTTAAAAGCAATGCTCCGTTTGCTCGAAAGTTTGCGAAGGATGATCCCGTTCTCGACAAGATTGACAAAGAAG TTTTGGGTCGTACACATAGATTTTCACATGGAGCATGGTGTGTTGGGACCTTAGATGCTGGGGCAGACCCTTGTTCTGTG CGTTGCAATGATACAGTGTTTAGTCCAGGCCCTGGTGCTGAGAGATTACATGGGCTGCTTCAGGTGCTGTTATCTGAAGA ATTTCAAAGCAAGCAGTGTTTGTGA
Protein sequence (LotjaGi3g1v0458900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MRKNGGSHSGRMFSDRKWIIPFFASLLVSVSLLLTSFLGVLSSAGGGGEQAPFDIISFKRSEDSSGYFVESELGSSLNAS VLVKKEAPRFAYLISGTKGDSHRLLRTLEAVYHPRNQYILHLDLEAPPRERLELANTVKADPVFREVENVRVMSQSNLVT YKGPTMIACTLQAIAILLKESSEWDWFINLSASDYPLVTQDDLLHVFSNLSRDLNFIEHTRFTGWKLNQRAKPIIVDPAL YLSKKSDLAFTTQRRTLPTAFKLFTGSAWVVLTRSFVEYCIWGWDNFPRTMLMYYTNFVSSPEGYFHTVICNTKEFRHTA ISHDLHYIAWDNPPKQHPMSLTMKDFEKMVKSNAPFARKFAKDDPVLDKIDKEVLGRTHRFSHGAWCVGTLDAGADPCSV RCNDTVFSPGPGAERLHGLLQVLLSEEFQSKQCL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 46 | 46 | - | – | |
| Phobius | 1 | 21 | 21 | - | – | |
| PANTHER | 2 | 433 | 432 | 1.5E-248 | – | |
| PANTHER | 2 | 433 | 432 | 1.5E-248 | – | |
| TMHMM | 19 | 41 | 23 | - | – | |
| Phobius | 22 | 41 | 20 | - | – | |
| Phobius | 42 | 46 | 5 | - | – | |
| Phobius | 47 | 434 | 388 | - | – | |
| Pfam | 90 | 349 | 260 | 2.2E-75 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
Expression pattern of LotjaGi3g1v0458900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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